RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 GPTP24298 496 aa14.46□□□□□ -0.09
NELFE-205ENST00000441998 FKBP4Q02790 459 aaKnown RBP eCLIP14.46□□□□□ -0.09
NELFE-205ENST00000441998 TRIM28Q13263 835 aaKnown RBP14.46□□□□□ -0.09
NELFE-205ENST00000441998 ANKRD13DQ6ZTN6 518 aa14.46□□□□□ -0.09
NELFE-205ENST00000441998 NUTM1Q86Y26 1132 aa14.46□□□□□ -0.09
NELFE-205ENST00000441998 PLBD2Q8NHP8 589 aa14.46□□□□□ -0.09
NELFE-205ENST00000441998 RPGRQ92834 1020 aaKnown RBP14.46□□□□□ -0.09
NELFE-205ENST00000441998 RBM17Q96I25 401 aaKnown RBP14.46□□□□□ -0.09
NELFE-205ENST00000441998 PSMD1Q99460 953 aa14.46□□□□□ -0.09
NELFE-205ENST00000441998 NLRP10Q86W26 655 aa14.45□□□□□ -0.1
NELFE-205ENST00000441998 RRAGCQ9HB90 399 aa14.45□□□□□ -0.1
NELFE-205ENST00000441998 CHPF2Q9P2E5 772 aa14.45□□□□□ -0.1
NELFE-205ENST00000441998 IL16Q14005 1332 aa14.44□□□□□ -0.1
NELFE-205ENST00000441998 APLP1P51693 650 aa14.44□□□□□ -0.1
NELFE-205ENST00000441998 KRT24Q2M2I5 525 aa14.44□□□□□ -0.1
NELFE-205ENST00000441998 VPS33BQ9H267 617 aa14.44□□□□□ -0.1
NELFE-205ENST00000441998 ANKRD31Q8N7Z5 1873 aa14.44□□□□□ -0.1
NELFE-205ENST00000441998 BBOX1O75936 387 aa14.43□□□□□ -0.1
NELFE-205ENST00000441998 ANXA1P04083 346 aa14.43□□□□□ -0.1
NELFE-205ENST00000441998 HSP90B1P14625 803 aaKnown RBP14.43□□□□□ -0.1
NELFE-205ENST00000441998 AIMP1Q12904 312 aaKnown RBP14.43□□□□□ -0.1
NELFE-205ENST00000441998 TMX4Q9H1E5 349 aaPredicted RBP14.43□□□□□ -0.1
NELFE-205ENST00000441998 ZNF219Q9P2Y4 722 aaPredicted RBP14.43□□□□□ -0.1
NELFE-205ENST00000441998 ABCC12Q96J65 1359 aa14.43□□□□□ -0.1
NELFE-205ENST00000441998 SH3TC1Q8TE82 1336 aa14.42□□□□□ -0.1
NELFE-205ENST00000441998 CCDC30Q5VVM6 783 aa14.42□□□□□ -0.1
NELFE-205ENST00000441998 TMC4Q7Z404 712 aa14.42□□□□□ -0.1
NELFE-205ENST00000441998 WWC1Q8IX03 1113 aa14.42□□□□□ -0.1
NELFE-205ENST00000441998 SMC1BQ8NDV3 1235 aa14.42□□□□□ -0.1
NELFE-205ENST00000441998 NECTIN2Q92692 538 aa14.42□□□□□ -0.1
NELFE-205ENST00000441998 ISCA1Q9BUE6 129 aa14.42□□□□□ -0.1
NELFE-205ENST00000441998 MRS2Q9HD23 443 aa14.42□□□□□ -0.1
NELFE-205ENST00000441998 TRMT112Q9UI30 125 aaKnown RBP14.42□□□□□ -0.1
NELFE-205ENST00000441998 L3MBTL3Q96JM7 780 aaPredicted RBP14.41□□□□□ -0.1
NELFE-205ENST00000441998 IQCA1LA6NCM1 817 aa14.4□□□□□ -0.1
NELFE-205ENST00000441998 CCDC184Q52MB2 194 aa14.4□□□□□ -0.1
NELFE-205ENST00000441998 WDR63Q8IWG1 891 aa14.4□□□□□ -0.1
NELFE-205ENST00000441998 SYNE4Q8N205 404 aa14.4□□□□□ -0.1
NELFE-205ENST00000441998 ATP6V0A2Q9Y487 856 aa14.4□□□□□ -0.1
NELFE-205ENST00000441998 POTECB2RU33 542 aa14.39□□□□□ -0.11
NELFE-205ENST00000441998 FZD9O00144 591 aa14.39□□□□□ -0.11
NELFE-205ENST00000441998 DDX58O95786 925 aaKnown RBP14.39□□□□□ -0.11
NELFE-205ENST00000441998 IARSP41252 1262 aaKnown RBP14.39□□□□□ -0.11
NELFE-205ENST00000441998 GOLGA2Q08379 1002 aa14.39□□□□□ -0.11
NELFE-205ENST00000441998 SP8Q8IXZ3 490 aa14.39□□□□□ -0.11
NELFE-205ENST00000441998 JDP2Q8WYK2 163 aa14.39□□□□□ -0.11
NELFE-205ENST00000441998 SNED1Q8TER0 1413 aa14.39□□□□□ -0.11
NELFE-205ENST00000441998 COL11A2P13942 1736 aaPredicted RBP14.38□□□□□ -0.11
NELFE-205ENST00000441998 SBF1O95248 1867 aa14.38□□□□□ -0.11
NELFE-205ENST00000441998 PPEF1O14829 653 aaPredicted RBP14.38□□□□□ -0.11
NELFE-205ENST00000441998 SF3B3Q15393 1217 aaKnown RBP14.38□□□□□ -0.11
NELFE-205ENST00000441998 DDX46Q7L014 1031 aaKnown RBP14.38□□□□□ -0.11
NELFE-205ENST00000441998 RIC3Q7Z5B4 369 aa14.38□□□□□ -0.11
NELFE-205ENST00000441998 C8orf58Q8NAV2 365 aa14.38□□□□□ -0.11
NELFE-205ENST00000441998 SUPT20HQ8NEM7 779 aa14.38□□□□□ -0.11
NELFE-205ENST00000441998 ZNF277Q9NRM2 450 aaPredicted RBP14.38□□□□□ -0.11
NELFE-205ENST00000441998 SLX4Q8IY92 1834 aa14.38□□□□□ -0.11
NELFE-205ENST00000441998 C3orf67Q6ZVT6 689 aa14.37□□□□□ -0.11
NELFE-205ENST00000441998 CCDC191Q8NCU4 936 aa14.37□□□□□ -0.11
NELFE-205ENST00000441998 RTFDC1Q9BY42 306 aaPredicted RBP14.37□□□□□ -0.11
NELFE-205ENST00000441998 FER1L6Q2WGJ9 1857 aa14.37□□□□□ -0.11
NELFE-205ENST00000441998 NUP98P52948 1817 aa14.36□□□□□ -0.11
NELFE-205ENST00000441998 CEP350Q5VT06 3117 aa14.36□□□□□ -0.11
NELFE-205ENST00000441998 ELL2O00472 640 aaPredicted RBP14.36□□□□□ -0.11
NELFE-205ENST00000441998 DDNO94850 711 aaPredicted RBP14.36□□□□□ -0.11
NELFE-205ENST00000441998 HCLS1P14317 486 aaPredicted RBP14.36□□□□□ -0.11
NELFE-205ENST00000441998 GRAPQ13588 217 aa14.36□□□□□ -0.11
NELFE-205ENST00000441998 GPC2Q8N158 579 aa14.36□□□□□ -0.11
NELFE-205ENST00000441998 ZBTB38Q8NAP3 1195 aaPredicted RBP14.36□□□□□ -0.11
NELFE-205ENST00000441998 GRAPLQ8TC17 118 aaPredicted RBP14.36□□□□□ -0.11
NELFE-205ENST00000441998 STK31Q9BXU1 1019 aa14.36□□□□□ -0.11
NELFE-205ENST00000441998 ABCC4O15439 1325 aa14.36□□□□□ -0.11
NELFE-205ENST00000441998 ARFGEF2Q9Y6D5 1785 aa14.35□□□□□ -0.11
NELFE-205ENST00000441998 OLFM4Q6UX06 510 aa14.35□□□□□ -0.11
NELFE-205ENST00000441998 METTL22Q9BUU2 404 aaPredicted RBP14.35□□□□□ -0.11
NELFE-205ENST00000441998 TNRC6CQ9HCJ0 1690 aaKnown RBP14.34□□□□□ -0.11
NELFE-205ENST00000441998 EIF6P56537 245 aaKnown RBP14.34□□□□□ -0.11
NELFE-205ENST00000441998 TWISTNBQ3B726 338 aaPredicted RBP14.34□□□□□ -0.11
NELFE-205ENST00000441998 KSR2Q6VAB6 950 aa14.34□□□□□ -0.11
NELFE-205ENST00000441998 PNMA8AQ86V59 439 aaPredicted RBP14.34□□□□□ -0.11
NELFE-205ENST00000441998 DNAJC5GQ8N7S2 189 aa14.34□□□□□ -0.11
NELFE-205ENST00000441998 FAM89AQ96GI7 184 aa14.34□□□□□ -0.11
NELFE-205ENST00000441998 PHAXQ9H814 394 aaKnown RBP14.34□□□□□ -0.11
NELFE-205ENST00000441998 WDR90Q96KV7 1748 aa14.33□□□□□ -0.12
NELFE-205ENST00000441998 ATP5J2-PTCD1G3V325 749 aa14.33□□□□□ -0.12
NELFE-205ENST00000441998 IRS4O14654 1257 aaPredicted RBP14.33□□□□□ -0.12
NELFE-205ENST00000441998 PCCAP05165 728 aaPredicted RBP14.33□□□□□ -0.12
NELFE-205ENST00000441998 CHADLQ6NUI6 762 aa14.33□□□□□ -0.12
NELFE-205ENST00000441998 LARGE2Q8N3Y3 721 aa14.33□□□□□ -0.12
NELFE-205ENST00000441998 TSPYL6Q8N831 410 aa14.33□□□□□ -0.12
NELFE-205ENST00000441998 DPP8Q6V1X1 898 aaPredicted RBP14.32□□□□□ -0.12
NELFE-205ENST00000441998 LDHDQ86WU2 507 aa14.32□□□□□ -0.12
NELFE-205ENST00000441998 MPNDQ8N594 471 aa14.32□□□□□ -0.12
NELFE-205ENST00000441998 TSR2Q969E8 191 aaKnown RBP14.32□□□□□ -0.12
NELFE-205ENST00000441998 TAF1DQ9H5J8 278 aaPredicted RBP14.32□□□□□ -0.12
NELFE-205ENST00000441998 CWC25Q9NXE8 425 aaPredicted RBP14.32□□□□□ -0.12
NELFE-205ENST00000441998 HACL1Q9UJ83 578 aa14.32□□□□□ -0.12
NELFE-205ENST00000441998 NEXNQ0ZGT2 675 aa14.31□□□□□ -0.12
NELFE-205ENST00000441998 NIM1KQ8IY84 436 aa14.31□□□□□ -0.12
NELFE-205ENST00000441998 MYH16Q9H6N6 1097 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms