RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 RTCBQ9Y3I0 505 aaKnown RBP25.05■■□□□ 1.6
VRK2-207ENST00000440705 GNPATO15228 680 aa25.04■■□□□ 1.6
VRK2-207ENST00000440705 GPTP24298 496 aa25.04■■□□□ 1.6
VRK2-207ENST00000440705 EPHA10Q5JZY3 1008 aa25.04■■□□□ 1.6
VRK2-207ENST00000440705 CLEC4GQ6UXB4 293 aa25.04■■□□□ 1.6
VRK2-207ENST00000440705 LRRCC1Q9C099 1032 aa25.04■■□□□ 1.6
VRK2-207ENST00000440705 NOP58Q9Y2X3 529 aaKnown RBP25.04■■□□□ 1.6
VRK2-207ENST00000440705 C4BP0C0L5 1744 aa25.04■■□□□ 1.6
VRK2-207ENST00000440705 APBB1O00213 710 aa25.04■■□□□ 1.6
VRK2-207ENST00000440705 TSHZ2Q9NRE2 1034 aa25.04■■□□□ 1.6
VRK2-207ENST00000440705 LRRC4BQ9NT99 713 aa25.04■■□□□ 1.6
VRK2-207ENST00000440705 PLSCR1O15162 318 aa25.02■■□□□ 1.6
VRK2-207ENST00000440705 FOXO4P98177 505 aa25.02■■□□□ 1.6
VRK2-207ENST00000440705 RTL5Q5HYW3 569 aaPredicted RBP25.02■■□□□ 1.6
VRK2-207ENST00000440705 AK7Q96M32 723 aa25.02■■□□□ 1.6
VRK2-207ENST00000440705 BCORQ6W2J9 1755 aa25.01■■□□□ 1.6
VRK2-207ENST00000440705 PARP10Q53GL7 1025 aa25.01■■□□□ 1.59
VRK2-207ENST00000440705 CDHR2Q9BYE9 1310 aa25.01■■□□□ 1.59
VRK2-207ENST00000440705 SMARCA5O60264 1052 aaPredicted RBP25■■□□□ 1.59
VRK2-207ENST00000440705 LMBR1LQ6UX01 489 aa25■■□□□ 1.59
VRK2-207ENST00000440705 KIF1BPQ96EK5 621 aa25■■□□□ 1.59
VRK2-207ENST00000440705 FAM89AQ96GI7 184 aa25■■□□□ 1.59
VRK2-207ENST00000440705 PLA2G12BQ9BX93 195 aa25■■□□□ 1.59
VRK2-207ENST00000440705 NARFQ9UHQ1 456 aa25■■□□□ 1.59
VRK2-207ENST00000440705 TRMT112Q9UI30 125 aaKnown RBP25■■□□□ 1.59
VRK2-207ENST00000440705 EP400Q96L91 3159 aa25■■□□□ 1.59
VRK2-207ENST00000440705 UBN2Q6ZU65 1347 aa24.99■■□□□ 1.59
VRK2-207ENST00000440705 APBA3O96018 575 aa24.99■■□□□ 1.59
VRK2-207ENST00000440705 ERC1Q8IUD2 1116 aa24.99■■□□□ 1.59
VRK2-207ENST00000440705 ZPR1O75312 459 aa24.98■■□□□ 1.59
VRK2-207ENST00000440705 TXNRD1Q16881 649 aa24.98■■□□□ 1.59
VRK2-207ENST00000440705 FAM161AQ3B820 660 aa24.98■■□□□ 1.59
VRK2-207ENST00000440705 ADRA2BP18089 450 aa24.97■■□□□ 1.59
VRK2-207ENST00000440705 OS9Q13438 667 aaPredicted RBP24.97■■□□□ 1.59
VRK2-207ENST00000440705 TRAPPC3LQ5T215 181 aa24.97■■□□□ 1.59
VRK2-207ENST00000440705 RHPN1Q8TCX5 695 aa24.97■■□□□ 1.59
VRK2-207ENST00000440705 NIP7Q9Y221 180 aaKnown RBP eCLIP24.97■■□□□ 1.59
VRK2-207ENST00000440705 G3BP1Q13283 466 aaKnown RBP eCLIP24.97■■□□□ 1.59
VRK2-207ENST00000440705 COPRSQ9NQ92 184 aa24.97■■□□□ 1.59
VRK2-207ENST00000440705 PLEKHM2Q8IWE5 1019 aa24.96■■□□□ 1.59
VRK2-207ENST00000440705 ARHGEF1Q92888 912 aaKnown RBP24.96■■□□□ 1.59
VRK2-207ENST00000440705 UTP14AQ9BVJ6 771 aaKnown RBP24.96■■□□□ 1.59
VRK2-207ENST00000440705 BACH2Q9BYV9 841 aa24.96■■□□□ 1.59
VRK2-207ENST00000440705 PA2G4Q9UQ80 394 aaKnown RBP24.96■■□□□ 1.59
VRK2-207ENST00000440705 SCN7AQ01118 1682 aa24.96■■□□□ 1.59
VRK2-207ENST00000440705 SUSD4Q5VX71 490 aa24.95■■□□□ 1.58
VRK2-207ENST00000440705 C16orf71Q8IYS4 520 aaPredicted RBP24.95■■□□□ 1.58
VRK2-207ENST00000440705 PROM2Q8N271 834 aa24.95■■□□□ 1.58
VRK2-207ENST00000440705 CHMP3Q9Y3E7 222 aa24.95■■□□□ 1.58
VRK2-207ENST00000440705 RFC4P35249 363 aa24.94■■□□□ 1.58
VRK2-207ENST00000440705 RFX5P48382 616 aaPredicted RBP24.94■■□□□ 1.58
VRK2-207ENST00000440705 BCL11AQ9H165 835 aa24.94■■□□□ 1.58
VRK2-207ENST00000440705 IRS4O14654 1257 aaPredicted RBP24.94■■□□□ 1.58
VRK2-207ENST00000440705 HSP90B1P14625 803 aaKnown RBP24.94■■□□□ 1.58
VRK2-207ENST00000440705 USPL1Q5W0Q7 1092 aa24.94■■□□□ 1.58
VRK2-207ENST00000440705 SH3TC1Q8TE82 1336 aa24.93■■□□□ 1.58
VRK2-207ENST00000440705 PTPN12Q05209 780 aaKnown RBP24.93■■□□□ 1.58
VRK2-207ENST00000440705 SMIM5Q71RC9 77 aa24.93■■□□□ 1.58
VRK2-207ENST00000440705 PDE8AO60658 829 aa24.92■■□□□ 1.58
VRK2-207ENST00000440705 CSF1RP07333 972 aa24.92■■□□□ 1.58
VRK2-207ENST00000440705 BCL2L12Q9HB09 334 aa24.92■■□□□ 1.58
VRK2-207ENST00000440705 BMP2KLQ5H9B9 411 aa24.91■■□□□ 1.58
VRK2-207ENST00000440705 AMIGO3Q86WK7 504 aa24.91■■□□□ 1.58
VRK2-207ENST00000440705 SYNE4Q8N205 404 aa24.91■■□□□ 1.58
VRK2-207ENST00000440705 IL1RAPL2Q9NP60 686 aa24.91■■□□□ 1.58
VRK2-207ENST00000440705 UBR3Q6ZT12 1888 aa24.91■■□□□ 1.58
VRK2-207ENST00000440705 PHF14O94880 888 aa24.91■■□□□ 1.58
VRK2-207ENST00000440705 SSFA2P28290 1259 aa24.91■■□□□ 1.58
VRK2-207ENST00000440705 C8orf34Q49A92 452 aa24.91■■□□□ 1.58
VRK2-207ENST00000440705 KLHDC4Q8TBB5 520 aa24.91■■□□□ 1.58
VRK2-207ENST00000440705 SRP68Q9UHB9 627 aaKnown RBP24.91■■□□□ 1.58
VRK2-207ENST00000440705 USP42Q9H9J4 1324 aaKnown RBP24.9■■□□□ 1.58
VRK2-207ENST00000440705 TNS1Q9HBL0 1735 aaKnown RBP24.9■■□□□ 1.58
VRK2-207ENST00000440705 CCDC57Q2TAC2 916 aa24.9■■□□□ 1.58
VRK2-207ENST00000440705 CLASRPQ8N2M8 674 aaKnown RBP24.9■■□□□ 1.58
VRK2-207ENST00000440705 OTUD7AQ8TE49 926 aaPredicted RBP24.9■■□□□ 1.58
VRK2-207ENST00000440705 SIL1Q9H173 461 aa24.9■■□□□ 1.58
VRK2-207ENST00000440705 OSBPL3Q9H4L5 887 aa24.9■■□□□ 1.58
VRK2-207ENST00000440705 MYH3P11055 1940 aa24.9■■□□□ 1.58
VRK2-207ENST00000440705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.89■■□□□ 1.58
VRK2-207ENST00000440705 NTSR2O95665 410 aa24.89■■□□□ 1.58
VRK2-207ENST00000440705 CTSWP56202 376 aa24.89■■□□□ 1.58
VRK2-207ENST00000440705 SETDB2Q96T68 719 aa24.89■■□□□ 1.58
VRK2-207ENST00000440705 C4AP0C0L4 1744 aa24.89■■□□□ 1.58
VRK2-207ENST00000440705 RGPD3A6NKT7 1758 aaPredicted RBP24.88■■□□□ 1.57
VRK2-207ENST00000440705 RGPD4Q7Z3J3 1758 aa24.88■■□□□ 1.57
VRK2-207ENST00000440705 FAM177BA6PVY3 158 aa24.88■■□□□ 1.57
VRK2-207ENST00000440705 TBC1D9BQ66K14 1250 aa24.88■■□□□ 1.57
VRK2-207ENST00000440705 TTLL11Q8NHH1 800 aa24.88■■□□□ 1.57
VRK2-207ENST00000440705 SASH1O94885 1247 aa24.88■■□□□ 1.57
VRK2-207ENST00000440705 MX1P20591 662 aa24.88■■□□□ 1.57
VRK2-207ENST00000440705 PDE1AP54750 535 aa24.88■■□□□ 1.57
VRK2-207ENST00000440705 SALL3Q9BXA9 1300 aa24.87■■□□□ 1.57
VRK2-207ENST00000440705 IFIT5Q13325 482 aaKnown RBP24.87■■□□□ 1.57
VRK2-207ENST00000440705 NYXQ9GZU5 481 aa24.87■■□□□ 1.57
VRK2-207ENST00000440705 TTC22Q5TAA0 569 aa24.86■■□□□ 1.57
VRK2-207ENST00000440705 STAP2Q9UGK3 403 aa24.86■■□□□ 1.57
VRK2-207ENST00000440705 FBXO3Q9UK99 471 aa24.86■■□□□ 1.57
VRK2-207ENST00000440705 BICDL1Q6ZP65 573 aa24.85■■□□□ 1.57
VRK2-207ENST00000440705 CIAO1O76071 339 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms