RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 PPP1R42Q7Z4L9 355 aa21.95■■□□□ 1.1
COL16A1-204ENST00000440437 CFAP44Q96MT7 982 aa21.95■■□□□ 1.1
COL16A1-204ENST00000440437 HOXA10P31260 410 aaPredicted RBP21.94■■□□□ 1.1
COL16A1-204ENST00000440437 SMC1BQ8NDV3 1235 aa21.94■■□□□ 1.1
COL16A1-204ENST00000440437 XAGE3Q8WTP9 111 aa21.94■■□□□ 1.1
COL16A1-204ENST00000440437 DDX60Q8IY21 1712 aaKnown RBP21.93■■□□□ 1.1
COL16A1-204ENST00000440437 RTKN2Q8IZC4 609 aa21.93■■□□□ 1.1
COL16A1-204ENST00000440437 RNF123Q5XPI4 1314 aa21.92■■□□□ 1.1
COL16A1-204ENST00000440437 APAF1O14727 1248 aa21.92■■□□□ 1.1
COL16A1-204ENST00000440437 ZNF853P0CG23 659 aa21.92■■□□□ 1.1
COL16A1-204ENST00000440437 AIMP1Q12904 312 aaKnown RBP21.92■■□□□ 1.1
COL16A1-204ENST00000440437 C3orf67Q6ZVT6 689 aa21.92■■□□□ 1.1
COL16A1-204ENST00000440437 RPGRQ92834 1020 aaKnown RBP21.92■■□□□ 1.1
COL16A1-204ENST00000440437 MBIPQ9NS73 344 aa21.92■■□□□ 1.1
COL16A1-204ENST00000440437 CHPF2Q9P2E5 772 aa21.92■■□□□ 1.1
COL16A1-204ENST00000440437 HSP90AB3PQ58FF7 597 aa21.91■■□□□ 1.1
COL16A1-204ENST00000440437 HDGFL1Q5TGJ6 251 aa21.91■■□□□ 1.1
COL16A1-204ENST00000440437 DNAJC5GQ8N7S2 189 aa21.91■■□□□ 1.1
COL16A1-204ENST00000440437 UTP14AQ9BVJ6 771 aaKnown RBP21.91■■□□□ 1.1
COL16A1-204ENST00000440437 ZNF277Q9NRM2 450 aaPredicted RBP21.91■■□□□ 1.1
COL16A1-204ENST00000440437 DDNO94850 711 aaPredicted RBP21.9■■□□□ 1.1
COL16A1-204ENST00000440437 SLC10A5Q5PT55 438 aa21.9■■□□□ 1.1
COL16A1-204ENST00000440437 CRAMP1Q96RY5 1269 aa21.9■■□□□ 1.1
COL16A1-204ENST00000440437 COL4A5P29400 1685 aa21.9■■□□□ 1.1
COL16A1-204ENST00000440437 TCIRG1Q13488 830 aa21.89■■□□□ 1.09
COL16A1-204ENST00000440437 CC2D2BQ6DHV5 1058 aa21.89■■□□□ 1.09
COL16A1-204ENST00000440437 NLRP10Q86W26 655 aa21.89■■□□□ 1.09
COL16A1-204ENST00000440437 PSMD1Q99460 953 aa21.89■■□□□ 1.09
COL16A1-204ENST00000440437 ZEB1P37275 1124 aaPredicted RBP21.88■■□□□ 1.09
COL16A1-204ENST00000440437 IARSP41252 1262 aaKnown RBP21.88■■□□□ 1.09
COL16A1-204ENST00000440437 CCDC184Q52MB2 194 aa21.88■■□□□ 1.09
COL16A1-204ENST00000440437 DUSP27Q5VZP5 1158 aa21.88■■□□□ 1.09
COL16A1-204ENST00000440437 SLC51AQ86UW1 340 aa21.88■■□□□ 1.09
COL16A1-204ENST00000440437 SYNE4Q8N205 404 aa21.88■■□□□ 1.09
COL16A1-204ENST00000440437 RBM17Q96I25 401 aaKnown RBP21.88■■□□□ 1.09
COL16A1-204ENST00000440437 NLRP3Q96P20 1036 aa21.88■■□□□ 1.09
COL16A1-204ENST00000440437 IFT57Q9NWB7 429 aa21.88■■□□□ 1.09
COL16A1-204ENST00000440437 DBF4Q9UBU7 674 aaPredicted RBP21.88■■□□□ 1.09
COL16A1-204ENST00000440437 TAF1P21675 1872 aa21.88■■□□□ 1.09
COL16A1-204ENST00000440437 ZNF541Q9H0D2 1346 aa21.87■■□□□ 1.09
COL16A1-204ENST00000440437 HTRA3P83110 453 aa21.87■■□□□ 1.09
COL16A1-204ENST00000440437 L3MBTL3Q96JM7 780 aaPredicted RBP21.87■■□□□ 1.09
COL16A1-204ENST00000440437 ADAMTSL1Q8N6G6 1762 aa21.87■■□□□ 1.09
COL16A1-204ENST00000440437 PPEF1O14829 653 aaPredicted RBP21.86■■□□□ 1.09
COL16A1-204ENST00000440437 PLBD2Q8NHP8 589 aa21.86■■□□□ 1.09
COL16A1-204ENST00000440437 LRRC37AA6NMS7 1700 aa21.86■■□□□ 1.09
COL16A1-204ENST00000440437 FZD9O00144 591 aa21.85■■□□□ 1.09
COL16A1-204ENST00000440437 GNAI1P63096 354 aa21.85■■□□□ 1.09
COL16A1-204ENST00000440437 CALD1Q05682 793 aaKnown RBP21.85■■□□□ 1.09
COL16A1-204ENST00000440437 ABCC4O15439 1325 aa21.84■■□□□ 1.09
COL16A1-204ENST00000440437 GRIPAP1Q4V328 841 aa21.84■■□□□ 1.09
COL16A1-204ENST00000440437 HYPKQ9NX55 129 aa21.84■■□□□ 1.09
COL16A1-204ENST00000440437 SH3TC1Q8TE82 1336 aa21.83■■□□□ 1.09
COL16A1-204ENST00000440437 ANKRD13DQ6ZTN6 518 aa21.83■■□□□ 1.09
COL16A1-204ENST00000440437 ISCA1Q9BUE6 129 aa21.83■■□□□ 1.09
COL16A1-204ENST00000440437 TRMT112Q9UI30 125 aaKnown RBP21.83■■□□□ 1.09
COL16A1-204ENST00000440437 IQCA1LA6NCM1 817 aa21.82■■□□□ 1.08
COL16A1-204ENST00000440437 POTEIP0CG38 1075 aa21.82■■□□□ 1.08
COL16A1-204ENST00000440437 POTEJP0CG39 1038 aa21.82■■□□□ 1.08
COL16A1-204ENST00000440437 HCLS1P14317 486 aaPredicted RBP21.82■■□□□ 1.08
COL16A1-204ENST00000440437 KLRG1Q96E93 195 aa21.82■■□□□ 1.08
COL16A1-204ENST00000440437 LTBP1Q14766 1721 aa21.81■■□□□ 1.08
COL16A1-204ENST00000440437 TCERG1O14776 1098 aaKnown RBP21.8■■□□□ 1.08
COL16A1-204ENST00000440437 CHADLQ6NUI6 762 aa21.8■■□□□ 1.08
COL16A1-204ENST00000440437 TAF1DQ9H5J8 278 aaPredicted RBP21.8■■□□□ 1.08
COL16A1-204ENST00000440437 ATP6V0A2Q9Y487 856 aa21.8■■□□□ 1.08
COL16A1-204ENST00000440437 C8orf58Q8NAV2 365 aa21.79■■□□□ 1.08
COL16A1-204ENST00000440437 JDP2Q8WYK2 163 aa21.79■■□□□ 1.08
COL16A1-204ENST00000440437 COL4A1P02462 1669 aa21.79■■□□□ 1.08
COL16A1-204ENST00000440437 DUOX1Q9NRD9 1551 aa21.78■■□□□ 1.08
COL16A1-204ENST00000440437 ELL2O00472 640 aaPredicted RBP21.78■■□□□ 1.08
COL16A1-204ENST00000440437 CCDC27Q2M243 656 aa21.78■■□□□ 1.08
COL16A1-204ENST00000440437 GPC2Q8N158 579 aa21.78■■□□□ 1.08
COL16A1-204ENST00000440437 ZNF428Q96B54 188 aa21.78■■□□□ 1.08
COL16A1-204ENST00000440437 PHAXQ9H814 394 aaKnown RBP21.78■■□□□ 1.08
COL16A1-204ENST00000440437 ZNF316A6NFI3 1004 aaPredicted RBP21.77■■□□□ 1.08
COL16A1-204ENST00000440437 ATP5J2-PTCD1G3V325 749 aa21.77■■□□□ 1.08
COL16A1-204ENST00000440437 JMYQ8N9B5 988 aa21.77■■□□□ 1.08
COL16A1-204ENST00000440437 HACL1Q9UJ83 578 aa21.77■■□□□ 1.08
COL16A1-204ENST00000440437 BBOX1O75936 387 aa21.76■■□□□ 1.07
COL16A1-204ENST00000440437 TRIM28Q13263 835 aaKnown RBP21.76■■□□□ 1.07
COL16A1-204ENST00000440437 GRAPQ13588 217 aa21.76■■□□□ 1.07
COL16A1-204ENST00000440437 LDHDQ86WU2 507 aa21.76■■□□□ 1.07
COL16A1-204ENST00000440437 LARGE2Q8N3Y3 721 aa21.76■■□□□ 1.07
COL16A1-204ENST00000440437 GRAPLQ8TC17 118 aaPredicted RBP21.76■■□□□ 1.07
COL16A1-204ENST00000440437 RTFDC1Q9BY42 306 aaPredicted RBP21.76■■□□□ 1.07
COL16A1-204ENST00000440437 DDX46Q7L014 1031 aaKnown RBP21.75■■□□□ 1.07
COL16A1-204ENST00000440437 SP8Q8IXZ3 490 aa21.75■■□□□ 1.07
COL16A1-204ENST00000440437 FAM89AQ96GI7 184 aa21.75■■□□□ 1.07
COL16A1-204ENST00000440437 VPS33BQ9H267 617 aa21.75■■□□□ 1.07
COL16A1-204ENST00000440437 EPHX2P34913 555 aa21.74■■□□□ 1.07
COL16A1-204ENST00000440437 EIF6P56537 245 aaKnown RBP21.74■■□□□ 1.07
COL16A1-204ENST00000440437 GOLGA2Q08379 1002 aa21.74■■□□□ 1.07
COL16A1-204ENST00000440437 RIC3Q7Z5B4 369 aa21.74■■□□□ 1.07
COL16A1-204ENST00000440437 WWC1Q8IX03 1113 aa21.74■■□□□ 1.07
COL16A1-204ENST00000440437 TSPYL6Q8N831 410 aa21.74■■□□□ 1.07
COL16A1-204ENST00000440437 TMX4Q9H1E5 349 aaPredicted RBP21.74■■□□□ 1.07
COL16A1-204ENST00000440437 PPIP5K2O43314 1243 aa21.73■■□□□ 1.07
COL16A1-204ENST00000440437 SF3B3Q15393 1217 aaKnown RBP21.73■■□□□ 1.07
COL16A1-204ENST00000440437 AOC3Q16853 763 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms