RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 PDE6BP35913 854 aa24.91■■□□□ 1.58
SEMA3B-206ENST00000439487 FKBP5Q13451 457 aaPredicted RBP24.91■■□□□ 1.58
SEMA3B-206ENST00000439487 UTP14AQ9BVJ6 771 aaKnown RBP24.91■■□□□ 1.58
SEMA3B-206ENST00000439487 YBX3P16989 372 aaKnown RBP eCLIP24.9■■□□□ 1.58
SEMA3B-206ENST00000439487 YY1P25490 414 aa24.9■■□□□ 1.58
SEMA3B-206ENST00000439487 METTL22Q9BUU2 404 aaPredicted RBP24.9■■□□□ 1.58
SEMA3B-206ENST00000439487 TNRC6CQ9HCJ0 1690 aaKnown RBP24.9■■□□□ 1.58
SEMA3B-206ENST00000439487 ABCC12Q96J65 1359 aa24.9■■□□□ 1.58
SEMA3B-206ENST00000439487 H0YIN7 160 aa24.89■■□□□ 1.58
SEMA3B-206ENST00000439487 MRPL50Q8N5N7 158 aaKnown RBP24.89■■□□□ 1.58
SEMA3B-206ENST00000439487 SSH1Q8WYL5 1049 aa24.89■■□□□ 1.58
SEMA3B-206ENST00000439487 ARFGEF1Q9Y6D6 1849 aa24.89■■□□□ 1.57
SEMA3B-206ENST00000439487 PIM2Q9P1W9 311 aa24.88■■□□□ 1.57
SEMA3B-206ENST00000439487 TRIM28Q13263 835 aaKnown RBP24.87■■□□□ 1.57
SEMA3B-206ENST00000439487 BCL2L13Q9BXK5 485 aa24.87■■□□□ 1.57
SEMA3B-206ENST00000439487 TRMT112Q9UI30 125 aaKnown RBP24.87■■□□□ 1.57
SEMA3B-206ENST00000439487 BCS1LQ9Y276 419 aa24.87■■□□□ 1.57
SEMA3B-206ENST00000439487 LAMB2P55268 1798 aa24.87■■□□□ 1.57
SEMA3B-206ENST00000439487 CT47B1P0C2W7 299 aaPredicted RBP24.86■■□□□ 1.57
SEMA3B-206ENST00000439487 SYNE4Q8N205 404 aa24.86■■□□□ 1.57
SEMA3B-206ENST00000439487 ZNF622Q969S3 477 aaKnown RBP eCLIP24.86■■□□□ 1.57
SEMA3B-206ENST00000439487 PDZRN3Q9UPQ7 1066 aa24.86■■□□□ 1.57
SEMA3B-206ENST00000439487 CHD4Q14839 1912 aa24.86■■□□□ 1.57
SEMA3B-206ENST00000439487 DDX60Q8IY21 1712 aaKnown RBP24.85■■□□□ 1.57
SEMA3B-206ENST00000439487 UTRNP46939 3433 aa24.85■■□□□ 1.57
SEMA3B-206ENST00000439487 F6X3S4 739 aa24.84■■□□□ 1.57
SEMA3B-206ENST00000439487 ALDH1L2Q3SY69 923 aa24.84■■□□□ 1.57
SEMA3B-206ENST00000439487 DNAAF4Q8WXU2 420 aa24.84■■□□□ 1.57
SEMA3B-206ENST00000439487 SLX4Q8IY92 1834 aa24.84■■□□□ 1.57
SEMA3B-206ENST00000439487 SH3TC1Q8TE82 1336 aa24.84■■□□□ 1.57
SEMA3B-206ENST00000439487 KLRG2A4D1S0 409 aaPredicted RBP24.83■■□□□ 1.57
SEMA3B-206ENST00000439487 IGKV5-2P06315 115 aa24.83■■□□□ 1.57
SEMA3B-206ENST00000439487 SRGNP10124 158 aa24.83■■□□□ 1.57
SEMA3B-206ENST00000439487 NEXNQ0ZGT2 675 aa24.83■■□□□ 1.57
SEMA3B-206ENST00000439487 DALRD3Q5D0E6 543 aaKnown RBP24.83■■□□□ 1.57
SEMA3B-206ENST00000439487 SLC10A5Q5PT55 438 aa24.83■■□□□ 1.57
SEMA3B-206ENST00000439487 CCDC191Q8NCU4 936 aa24.83■■□□□ 1.57
SEMA3B-206ENST00000439487 FAM89AQ96GI7 184 aa24.83■■□□□ 1.57
SEMA3B-206ENST00000439487 SMC4Q9NTJ3 1288 aa24.83■■□□□ 1.57
SEMA3B-206ENST00000439487 RNF123Q5XPI4 1314 aa24.83■■□□□ 1.56
SEMA3B-206ENST00000439487 HCLS1P14317 486 aaPredicted RBP24.82■■□□□ 1.56
SEMA3B-206ENST00000439487 RIC1Q4ADV7 1423 aa24.82■■□□□ 1.56
SEMA3B-206ENST00000439487 RTL5Q5HYW3 569 aaPredicted RBP24.82■■□□□ 1.56
SEMA3B-206ENST00000439487 MASTLQ96GX5 879 aa24.82■■□□□ 1.56
SEMA3B-206ENST00000439487 CWC25Q9NXE8 425 aaPredicted RBP24.82■■□□□ 1.56
SEMA3B-206ENST00000439487 GRIN3BO60391 1043 aa24.81■■□□□ 1.56
SEMA3B-206ENST00000439487 CWF19L2Q2TBE0 894 aaKnown RBP24.81■■□□□ 1.56
SEMA3B-206ENST00000439487 C3orf67Q6ZVT6 689 aa24.81■■□□□ 1.56
SEMA3B-206ENST00000439487 TTLL6Q8N841 843 aa24.81■■□□□ 1.56
SEMA3B-206ENST00000439487 RARSP54136 660 aaKnown RBP24.8■■□□□ 1.56
SEMA3B-206ENST00000439487 STYK1Q6J9G0 422 aa24.8■■□□□ 1.56
SEMA3B-206ENST00000439487 JARID2Q92833 1246 aaPredicted RBP24.8■■□□□ 1.56
SEMA3B-206ENST00000439487 TAF1P21675 1872 aa24.8■■□□□ 1.56
SEMA3B-206ENST00000439487 NEURL1BA8MQ27 555 aa24.79■■□□□ 1.56
SEMA3B-206ENST00000439487 NPR1P16066 1061 aa24.79■■□□□ 1.56
SEMA3B-206ENST00000439487 ZBTB38Q8NAP3 1195 aaPredicted RBP24.79■■□□□ 1.56
SEMA3B-206ENST00000439487 NLRP3Q96P20 1036 aa24.79■■□□□ 1.56
SEMA3B-206ENST00000439487 CRY2Q49AN0 593 aa24.78■■□□□ 1.56
SEMA3B-206ENST00000439487 MYH3P11055 1940 aa24.78■■□□□ 1.56
SEMA3B-206ENST00000439487 PCCAP05165 728 aaPredicted RBP24.77■■□□□ 1.56
SEMA3B-206ENST00000439487 LINS1Q8NG48 757 aa24.77■■□□□ 1.56
SEMA3B-206ENST00000439487 CNKSR1Q969H4 720 aa24.77■■□□□ 1.56
SEMA3B-206ENST00000439487 IRS4O14654 1257 aaPredicted RBP24.76■■□□□ 1.55
SEMA3B-206ENST00000439487 BEND3Q5T5X7 828 aa24.76■■□□□ 1.55
SEMA3B-206ENST00000439487 SLC4A10Q6U841 1118 aa24.76■■□□□ 1.55
SEMA3B-206ENST00000439487 PTPRCP08575 1304 aa24.76■■□□□ 1.55
SEMA3B-206ENST00000439487 CCDC88AQ3V6T2 1871 aa24.75■■□□□ 1.55
SEMA3B-206ENST00000439487 RPGRQ92834 1020 aaKnown RBP24.75■■□□□ 1.55
SEMA3B-206ENST00000439487 ZNF219Q9P2Y4 722 aaPredicted RBP24.75■■□□□ 1.55
SEMA3B-206ENST00000439487 GCKRQ14397 625 aa24.74■■□□□ 1.55
SEMA3B-206ENST00000439487 NOB1Q9ULX3 412 aaKnown RBP24.74■■□□□ 1.55
SEMA3B-206ENST00000439487 BRPF1P55201 1214 aaPredicted RBP24.73■■□□□ 1.55
SEMA3B-206ENST00000439487 PRPF40BQ6NWY9 871 aaKnown RBP24.73■■□□□ 1.55
SEMA3B-206ENST00000439487 ARHGAP27Q6ZUM4 889 aa24.73■■□□□ 1.55
SEMA3B-206ENST00000439487 YTHDC1Q96MU7 727 aaKnown RBP24.73■■□□□ 1.55
SEMA3B-206ENST00000439487 SBF1O95248 1867 aa24.72■■□□□ 1.55
SEMA3B-206ENST00000439487 H7C1W4 665 aa24.72■■□□□ 1.55
SEMA3B-206ENST00000439487 BCAR3O75815 825 aa24.72■■□□□ 1.55
SEMA3B-206ENST00000439487 ALDH1B1P30837 517 aa24.72■■□□□ 1.55
SEMA3B-206ENST00000439487 HOXA10P31260 410 aaPredicted RBP24.72■■□□□ 1.55
SEMA3B-206ENST00000439487 RBM17Q96I25 401 aaKnown RBP24.72■■□□□ 1.55
SEMA3B-206ENST00000439487 FER1L6Q2WGJ9 1857 aa24.71■■□□□ 1.55
SEMA3B-206ENST00000439487 C21orf2O43822 256 aa24.71■■□□□ 1.55
SEMA3B-206ENST00000439487 CDHR2Q9BYE9 1310 aa24.7■■□□□ 1.54
SEMA3B-206ENST00000439487 UBE3BQ7Z3V4 1068 aa24.7■■□□□ 1.54
SEMA3B-206ENST00000439487 CRAMP1Q96RY5 1269 aa24.7■■□□□ 1.54
SEMA3B-206ENST00000439487 SRCIN1Q9C0H9 1055 aa24.7■■□□□ 1.54
SEMA3B-206ENST00000439487 PDE8AO60658 829 aa24.69■■□□□ 1.54
SEMA3B-206ENST00000439487 SF3B3Q15393 1217 aaKnown RBP24.69■■□□□ 1.54
SEMA3B-206ENST00000439487 ABCC4O15439 1325 aa24.68■■□□□ 1.54
SEMA3B-206ENST00000439487 ALDH1L1O75891 902 aa24.68■■□□□ 1.54
SEMA3B-206ENST00000439487 HSP90B1P14625 803 aaKnown RBP24.68■■□□□ 1.54
SEMA3B-206ENST00000439487 CASP7P55210 303 aa24.67■■□□□ 1.54
SEMA3B-206ENST00000439487 DDX46Q7L014 1031 aaKnown RBP24.67■■□□□ 1.54
SEMA3B-206ENST00000439487 C7orf43Q8WVR3 580 aa24.67■■□□□ 1.54
SEMA3B-206ENST00000439487 API5Q9BZZ5 524 aaKnown RBP24.67■■□□□ 1.54
SEMA3B-206ENST00000439487 KIF16BQ96L93 1317 aa24.66■■□□□ 1.54
SEMA3B-206ENST00000439487 OLFM4Q6UX06 510 aa24.66■■□□□ 1.54
SEMA3B-206ENST00000439487 FRAT1Q92837 279 aaPredicted RBP24.65■■□□□ 1.54
SEMA3B-206ENST00000439487 CCDC85AQ96PX6 553 aaPredicted RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms