RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 AATKQ6ZMQ8 1374 aa9.6□□□□□ -0.87
TMEM39A-202ENST00000438581 SLC5A1P13866 664 aa9.6□□□□□ -0.87
TMEM39A-202ENST00000438581 TPM4P67936 248 aa9.6□□□□□ -0.87
TMEM39A-202ENST00000438581 IKQ13123 557 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-202ENST00000438581 CAVIN1Q6NZI2 390 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-202ENST00000438581 EVI5LQ96CN4 794 aa9.6□□□□□ -0.87
TMEM39A-202ENST00000438581 BICC1Q9H694 974 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-202ENST00000438581 ALKQ9UM73 1620 aa9.6□□□□□ -0.87
TMEM39A-202ENST00000438581 KCTD17Q8N5Z5 321 aa9.6□□□□□ -0.87
TMEM39A-202ENST00000438581 C6orf229H3BNL8 230 aa9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 SLC3A2P08195 630 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 EXOC8Q8IYI6 725 aa9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 RNF214Q8ND24 703 aa9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 RPGRQ92834 1020 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 KIDINS220Q9ULH0 1771 aa9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 PES1O00541 588 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 PHKG2P15735 406 aa9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 ANKRD1Q15327 319 aa9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 FERMT3Q86UX7 667 aa9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 CCDC83Q8IWF9 413 aa9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 CDC5LQ99459 802 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 PPRC1Q5VV67 1664 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 GOLGA6L19H0YKK7 550 aa9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 IMMTQ16891 758 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 CCDC73Q6ZRK6 1079 aa9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 SETDB2Q96T68 719 aa9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 CTDP1Q9Y5B0 961 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-202ENST00000438581 IGSF1Q8N6C5 1336 aa9.59□□□□□ -0.88
TMEM39A-202ENST00000438581 GIGYF1O75420 1035 aaPredicted RBP9.59□□□□□ -0.88
TMEM39A-202ENST00000438581 KIF20AO95235 890 aa9.59□□□□□ -0.88
TMEM39A-202ENST00000438581 SEC24BO95487 1268 aa9.59□□□□□ -0.88
TMEM39A-202ENST00000438581 MAP3K12Q12852 859 aa9.59□□□□□ -0.88
TMEM39A-202ENST00000438581 INO80Q9ULG1 1556 aaPredicted RBP9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 RNF123Q5XPI4 1314 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 PNMA6EA0A0J9YXQ4 647 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 HAND2P61296 217 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 KRT32Q14532 448 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 C8orf34Q49A92 452 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 ZSCAN29Q8IWY8 852 aaPredicted RBP9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 PIBF1Q8WXW3 757 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 BABAM1Q9NWV8 329 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 U3KPZ7 1027 aaPredicted RBP9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 ATP2B3Q16720 1220 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 PLEKHM2Q8IWE5 1019 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 NAPBQ9H115 298 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 YY1AP1Q9H869 796 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 GLI2P10070 1586 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 IRS4O14654 1257 aaPredicted RBP9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 PPFIA3O75145 1194 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 IL27Q8NEV9 243 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 TBC1D32Q96NH3 1257 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 SDF4Q9BRK5 362 aa9.58□□□□□ -0.88
TMEM39A-202ENST00000438581 ABCA6Q8N139 1617 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 ZNF521Q96K83 1311 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 CCDC69A6NI79 296 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 HOXB7P09629 217 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 TCEANC2Q96MN5 208 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 UBAC1Q9BSL1 405 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 ADGRB3O60242 1522 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 CCDC152Q4G0S7 254 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 CCDC82Q8N4S0 544 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 MADDQ8WXG6 1647 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 XBP1P17861 261 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 TIMM10P62072 90 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 SETDB1Q15047 1291 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 TPD52L1Q16890 204 aaPredicted RBP9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 BRINP3Q76B58 766 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 NLRP3Q96P20 1036 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 METTL22Q9BUU2 404 aaPredicted RBP9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 WWC3Q9ULE0 1092 aa9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 SOS1Q07889 1333 aaPredicted RBP9.57□□□□□ -0.88
TMEM39A-202ENST00000438581 HCLS1P14317 486 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 IL15P40933 162 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 TFCP2Q12800 502 aa9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 DZIP1Q86YF9 867 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 TRMT2AQ8IZ69 625 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 ERBB3P21860 1342 aa9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 GNPATO15228 680 aa9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 PLBD2Q8NHP8 589 aa9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 UTP14AQ9BVJ6 771 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 USP21Q9UK80 565 aa9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 RTCBQ9Y3I0 505 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 CLTCQ00610 1675 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 WDR33Q9C0J8 1336 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 PRAMEF22A3QJZ6 481 aa9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 CCDC24Q8N4L8 307 aa9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 AXIN2Q9Y2T1 843 aa9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 RBM25P49756 843 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 ANKRD18AQ8IVF6 992 aa9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 ZNF594Q96JF6 807 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-202ENST00000438581 LMTK2Q8IWU2 1503 aa9.55□□□□□ -0.88
TMEM39A-202ENST00000438581 ZNF213O14771 459 aa9.55□□□□□ -0.88
TMEM39A-202ENST00000438581 SLC4A8Q2Y0W8 1093 aa9.55□□□□□ -0.88
TMEM39A-202ENST00000438581 TRIM22Q8IYM9 498 aa9.55□□□□□ -0.88
TMEM39A-202ENST00000438581 RGS22Q8NE09 1264 aa9.55□□□□□ -0.88
TMEM39A-202ENST00000438581 ZSCAN31Q96LW9 406 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-202ENST00000438581 MCM4P33991 863 aa9.55□□□□□ -0.88
TMEM39A-202ENST00000438581 USP5P45974 858 aa9.55□□□□□ -0.88
TMEM39A-202ENST00000438581 STK38Q15208 465 aa9.55□□□□□ -0.88
TMEM39A-202ENST00000438581 PROSER3Q2NL68 480 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms