RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 MMP10P09238 476 aa23.23■■□□□ 1.31
HDAC6-208ENST00000438518 POLD1P28340 1107 aa23.23■■□□□ 1.31
HDAC6-208ENST00000438518 GCKRQ14397 625 aa23.23■■□□□ 1.31
HDAC6-208ENST00000438518 CWF19L2Q2TBE0 894 aaKnown RBP23.23■■□□□ 1.31
HDAC6-208ENST00000438518 TPTE2Q6XPS3 522 aa23.23■■□□□ 1.31
HDAC6-208ENST00000438518 BICDL1Q6ZP65 573 aa23.23■■□□□ 1.31
HDAC6-208ENST00000438518 HSP90B1P14625 803 aaKnown RBP23.22■■□□□ 1.31
HDAC6-208ENST00000438518 TMEM57Q8N5G2 664 aa23.22■■□□□ 1.31
HDAC6-208ENST00000438518 UTP14AQ9BVJ6 771 aaKnown RBP23.22■■□□□ 1.31
HDAC6-208ENST00000438518 HDAC5Q9UQL6 1122 aa23.22■■□□□ 1.31
HDAC6-208ENST00000438518 RIC1Q4ADV7 1423 aa23.22■■□□□ 1.31
HDAC6-208ENST00000438518 ZBTB7AO95365 584 aa23.21■■□□□ 1.31
HDAC6-208ENST00000438518 PCCAP05165 728 aaPredicted RBP23.21■■□□□ 1.31
HDAC6-208ENST00000438518 SUSD4Q5VX71 490 aa23.21■■□□□ 1.31
HDAC6-208ENST00000438518 MSL1Q68DK7 614 aa23.21■■□□□ 1.31
HDAC6-208ENST00000438518 NBPF5PQ86XG9 351 aaPredicted RBP23.21■■□□□ 1.31
HDAC6-208ENST00000438518 ZBTB38Q8NAP3 1195 aaPredicted RBP23.21■■□□□ 1.31
HDAC6-208ENST00000438518 UTYO14607 1347 aa23.2■■□□□ 1.3
HDAC6-208ENST00000438518 SH3TC1Q8TE82 1336 aa23.2■■□□□ 1.3
HDAC6-208ENST00000438518 GRM8O00222 908 aa23.2■■□□□ 1.3
HDAC6-208ENST00000438518 NTSR2O95665 410 aa23.2■■□□□ 1.3
HDAC6-208ENST00000438518 SERPINB2P05120 415 aa23.2■■□□□ 1.3
HDAC6-208ENST00000438518 DDR1Q08345 913 aa23.2■■□□□ 1.3
HDAC6-208ENST00000438518 MVPQ14764 893 aaKnown RBP23.2■■□□□ 1.3
HDAC6-208ENST00000438518 SPON1Q9HCB6 807 aa23.2■■□□□ 1.3
HDAC6-208ENST00000438518 TRMT112Q9UI30 125 aaKnown RBP23.2■■□□□ 1.3
HDAC6-208ENST00000438518 DDX19BQ9UMR2 479 aa23.2■■□□□ 1.3
HDAC6-208ENST00000438518 TNNQ9UQP3 1299 aa23.2■■□□□ 1.3
HDAC6-208ENST00000438518 CDHR2Q9BYE9 1310 aa23.19■■□□□ 1.3
HDAC6-208ENST00000438518 RLBP1P12271 317 aa23.19■■□□□ 1.3
HDAC6-208ENST00000438518 ITPRIPQ8IWB1 547 aa23.19■■□□□ 1.3
HDAC6-208ENST00000438518 CNBD1Q8NA66 436 aa23.19■■□□□ 1.3
HDAC6-208ENST00000438518 PANK1Q8TE04 598 aa23.19■■□□□ 1.3
HDAC6-208ENST00000438518 C9orf78Q9NZ63 289 aaPredicted RBP23.19■■□□□ 1.3
HDAC6-208ENST00000438518 NPHP1O15259 732 aa23.18■■□□□ 1.3
HDAC6-208ENST00000438518 ST5P78524 1137 aa23.18■■□□□ 1.3
HDAC6-208ENST00000438518 DDX60Q8IY21 1712 aaKnown RBP23.17■■□□□ 1.3
HDAC6-208ENST00000438518 H7C1W4 665 aa23.17■■□□□ 1.3
HDAC6-208ENST00000438518 GNAI3P08754 354 aa23.17■■□□□ 1.3
HDAC6-208ENST00000438518 GTF2E1P29083 439 aaPredicted RBP23.17■■□□□ 1.3
HDAC6-208ENST00000438518 SGIP1Q9BQI5 828 aa23.17■■□□□ 1.3
HDAC6-208ENST00000438518 MYH3P11055 1940 aa23.17■■□□□ 1.3
HDAC6-208ENST00000438518 KIF13BQ9NQT8 1826 aa23.17■■□□□ 1.3
HDAC6-208ENST00000438518 ATF5Q9Y2D1 282 aaPredicted RBP23.16■■□□□ 1.3
HDAC6-208ENST00000438518 C20orf194Q5TEA3 1177 aa23.15■■□□□ 1.3
HDAC6-208ENST00000438518 PRR5LQ6MZQ0 368 aa23.15■■□□□ 1.3
HDAC6-208ENST00000438518 USP44Q9H0E7 712 aa23.15■■□□□ 1.3
HDAC6-208ENST00000438518 AAMPQ13685 434 aa23.14■■□□□ 1.29
HDAC6-208ENST00000438518 SLC10A5Q5PT55 438 aa23.14■■□□□ 1.29
HDAC6-208ENST00000438518 COG6Q9Y2V7 657 aa23.14■■□□□ 1.29
HDAC6-208ENST00000438518 LRP5O75197 1615 aa23.13■■□□□ 1.29
HDAC6-208ENST00000438518 FAM177BA6PVY3 158 aa23.13■■□□□ 1.29
HDAC6-208ENST00000438518 UBTFL1P0CB47 393 aaPredicted RBP23.13■■□□□ 1.29
HDAC6-208ENST00000438518 PTGER2P43116 358 aa23.13■■□□□ 1.29
HDAC6-208ENST00000438518 CASP7P55210 303 aa23.13■■□□□ 1.29
HDAC6-208ENST00000438518 UBE3BQ7Z3V4 1068 aa23.13■■□□□ 1.29
HDAC6-208ENST00000438518 FAM89AQ96GI7 184 aa23.13■■□□□ 1.29
HDAC6-208ENST00000438518 PLA2G12BQ9BX93 195 aa23.13■■□□□ 1.29
HDAC6-208ENST00000438518 PDZRN3Q9UPQ7 1066 aa23.13■■□□□ 1.29
HDAC6-208ENST00000438518 C10orf71Q711Q0 1435 aa23.13■■□□□ 1.29
HDAC6-208ENST00000438518 ZBTB7BO15156 539 aaPredicted RBP23.12■■□□□ 1.29
HDAC6-208ENST00000438518 ANKRD31Q8N7Z5 1873 aa23.11■■□□□ 1.29
HDAC6-208ENST00000438518 IRS4O14654 1257 aaPredicted RBP23.11■■□□□ 1.29
HDAC6-208ENST00000438518 NBPF7P0C2Y1 421 aaPredicted RBP23.11■■□□□ 1.29
HDAC6-208ENST00000438518 ERFEQ4G0M1 354 aa23.11■■□□□ 1.29
HDAC6-208ENST00000438518 NUTM1Q86Y26 1132 aa23.11■■□□□ 1.29
HDAC6-208ENST00000438518 MEIS3Q99687 375 aa23.11■■□□□ 1.29
HDAC6-208ENST00000438518 BRIP1Q9BX63 1249 aa23.11■■□□□ 1.29
HDAC6-208ENST00000438518 PDE8AO60658 829 aa23.1■■□□□ 1.29
HDAC6-208ENST00000438518 ABCC12Q96J65 1359 aa23.1■■□□□ 1.29
HDAC6-208ENST00000438518 TNRC6CQ9HCJ0 1690 aaKnown RBP23.09■■□□□ 1.29
HDAC6-208ENST00000438518 PDE6BP35913 854 aa23.09■■□□□ 1.29
HDAC6-208ENST00000438518 NLRP3Q96P20 1036 aa23.09■■□□□ 1.29
HDAC6-208ENST00000438518 GNAI2P04899 355 aa23.08■■□□□ 1.29
HDAC6-208ENST00000438518 DLEC1Q9Y238 1755 aa23.07■■□□□ 1.28
HDAC6-208ENST00000438518 KLRG2A4D1S0 409 aaPredicted RBP23.07■■□□□ 1.28
HDAC6-208ENST00000438518 ZBTB40Q9NUA8 1239 aa23.07■■□□□ 1.28
HDAC6-208ENST00000438518 CD2APQ9Y5K6 639 aa23.07■■□□□ 1.28
HDAC6-208ENST00000438518 NEFLP07196 543 aa23.06■■□□□ 1.28
HDAC6-208ENST00000438518 RTL5Q5HYW3 569 aaPredicted RBP23.06■■□□□ 1.28
HDAC6-208ENST00000438518 CRBNQ96SW2 442 aa23.06■■□□□ 1.28
HDAC6-208ENST00000438518 CTSWP56202 376 aa23.05■■□□□ 1.28
HDAC6-208ENST00000438518 SF3B3Q15393 1217 aaKnown RBP23.05■■□□□ 1.28
HDAC6-208ENST00000438518 RABL6Q3YEC7 729 aaPredicted RBP23.05■■□□□ 1.28
HDAC6-208ENST00000438518 SUCLG2Q96I99 432 aa23.05■■□□□ 1.28
HDAC6-208ENST00000438518 RTL9Q8NET4 1388 aa23.04■■□□□ 1.28
HDAC6-208ENST00000438518 TGFB2P61812 414 aa23.04■■□□□ 1.28
HDAC6-208ENST00000438518 CRY2Q49AN0 593 aa23.04■■□□□ 1.28
HDAC6-208ENST00000438518 SYNE4Q8N205 404 aa23.04■■□□□ 1.28
HDAC6-208ENST00000438518 COL11A2P13942 1736 aaPredicted RBP23.03■■□□□ 1.28
HDAC6-208ENST00000438518 KIAA1551Q9HCM1 1747 aa23.03■■□□□ 1.28
HDAC6-208ENST00000438518 HCLS1P14317 486 aaPredicted RBP23.03■■□□□ 1.28
HDAC6-208ENST00000438518 FOXO4P98177 505 aa23.03■■□□□ 1.28
HDAC6-208ENST00000438518 CCDC152Q4G0S7 254 aa23.03■■□□□ 1.28
HDAC6-208ENST00000438518 LRRFIP2Q9Y608 721 aaKnown RBP23.03■■□□□ 1.28
HDAC6-208ENST00000438518 CSF1RP07333 972 aa23.02■■□□□ 1.28
HDAC6-208ENST00000438518 MTX1Q13505 466 aa23.02■■□□□ 1.28
HDAC6-208ENST00000438518 JARID2Q92833 1246 aaPredicted RBP23.02■■□□□ 1.28
HDAC6-208ENST00000438518 KAZALD1Q96I82 304 aa23.02■■□□□ 1.28
HDAC6-208ENST00000438518 BICC1Q9H694 974 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms