RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 SLX4Q8IY92 1834 aa26.91■■□□□ 1.9
GTF3A-203ENST00000435781 KLRG2A4D1S0 409 aaPredicted RBP26.9■■□□□ 1.9
GTF3A-203ENST00000435781 DDX58O95786 925 aaKnown RBP26.9■■□□□ 1.9
GTF3A-203ENST00000435781 G2E3Q7L622 706 aa26.9■■□□□ 1.9
GTF3A-203ENST00000435781 ISCA1Q9BUE6 129 aa26.9■■□□□ 1.9
GTF3A-203ENST00000435781 UTP14AQ9BVJ6 771 aaKnown RBP26.9■■□□□ 1.9
GTF3A-203ENST00000435781 SRGNP10124 158 aa26.89■■□□□ 1.9
GTF3A-203ENST00000435781 TTLL6Q8N841 843 aa26.89■■□□□ 1.9
GTF3A-203ENST00000435781 ZNF622Q969S3 477 aaKnown RBP eCLIP26.89■■□□□ 1.9
GTF3A-203ENST00000435781 RNF123Q5XPI4 1314 aa26.89■■□□□ 1.89
GTF3A-203ENST00000435781 ATP5J2-PTCD1G3V325 749 aa26.88■■□□□ 1.89
GTF3A-203ENST00000435781 DDX60Q8IY21 1712 aaKnown RBP26.87■■□□□ 1.89
GTF3A-203ENST00000435781 ADCY9O60503 1353 aa26.87■■□□□ 1.89
GTF3A-203ENST00000435781 STYK1Q6J9G0 422 aa26.87■■□□□ 1.89
GTF3A-203ENST00000435781 TRMT2AQ8IZ69 625 aaKnown RBP26.87■■□□□ 1.89
GTF3A-203ENST00000435781 FLIIQ13045 1269 aa26.86■■□□□ 1.89
GTF3A-203ENST00000435781 TRIM28Q13263 835 aaKnown RBP26.86■■□□□ 1.89
GTF3A-203ENST00000435781 KSR2Q6VAB6 950 aa26.86■■□□□ 1.89
GTF3A-203ENST00000435781 MASTLQ96GX5 879 aa26.86■■□□□ 1.89
GTF3A-203ENST00000435781 MAP3K2Q9Y2U5 619 aa26.86■■□□□ 1.89
GTF3A-203ENST00000435781 PI4KAP2A4QPH2 592 aa26.85■■□□□ 1.89
GTF3A-203ENST00000435781 YY1P25490 414 aa26.85■■□□□ 1.89
GTF3A-203ENST00000435781 HNRNPUQ00839 825 aaKnown RBP eCLIP26.85■■□□□ 1.89
GTF3A-203ENST00000435781 PI4KAP1Q8N8J0 262 aa26.85■■□□□ 1.89
GTF3A-203ENST00000435781 ZNF428Q96B54 188 aa26.85■■□□□ 1.89
GTF3A-203ENST00000435781 MYD88Q99836 296 aa26.85■■□□□ 1.89
GTF3A-203ENST00000435781 METTL22Q9BUU2 404 aaPredicted RBP26.85■■□□□ 1.89
GTF3A-203ENST00000435781 TRMT112Q9UI30 125 aaKnown RBP26.85■■□□□ 1.89
GTF3A-203ENST00000435781 SBF1O95248 1867 aa26.85■■□□□ 1.89
GTF3A-203ENST00000435781 NPR1P16066 1061 aa26.84■■□□□ 1.89
GTF3A-203ENST00000435781 CRY2Q49AN0 593 aa26.84■■□□□ 1.89
GTF3A-203ENST00000435781 SLC10A5Q5PT55 438 aa26.83■■□□□ 1.89
GTF3A-203ENST00000435781 SYNE4Q8N205 404 aa26.83■■□□□ 1.89
GTF3A-203ENST00000435781 CNKSR1Q969H4 720 aa26.83■■□□□ 1.89
GTF3A-203ENST00000435781 SH3TC1Q8TE82 1336 aa26.83■■□□□ 1.89
GTF3A-203ENST00000435781 FER1L6Q2WGJ9 1857 aa26.83■■□□□ 1.88
GTF3A-203ENST00000435781 CCDC88AQ3V6T2 1871 aa26.83■■□□□ 1.88
GTF3A-203ENST00000435781 ARHGAP27Q6ZUM4 889 aa26.82■■□□□ 1.88
GTF3A-203ENST00000435781 FKBP5Q13451 457 aaPredicted RBP26.81■■□□□ 1.88
GTF3A-203ENST00000435781 C3orf67Q6ZVT6 689 aa26.81■■□□□ 1.88
GTF3A-203ENST00000435781 PRPF40BQ6NWY9 871 aaKnown RBP26.8■■□□□ 1.88
GTF3A-203ENST00000435781 HCLS1P14317 486 aaPredicted RBP26.79■■□□□ 1.88
GTF3A-203ENST00000435781 CCDC191Q8NCU4 936 aa26.79■■□□□ 1.88
GTF3A-203ENST00000435781 NLRP3Q96P20 1036 aa26.79■■□□□ 1.88
GTF3A-203ENST00000435781 TAF1P21675 1872 aa26.79■■□□□ 1.88
GTF3A-203ENST00000435781 FAM89AQ96GI7 184 aa26.78■■□□□ 1.88
GTF3A-203ENST00000435781 MYH3P11055 1940 aa26.77■■□□□ 1.88
GTF3A-203ENST00000435781 IGKV5-2P06315 115 aa26.77■■□□□ 1.88
GTF3A-203ENST00000435781 NEXNQ0ZGT2 675 aa26.77■■□□□ 1.88
GTF3A-203ENST00000435781 RPGRQ92834 1020 aaKnown RBP26.77■■□□□ 1.88
GTF3A-203ENST00000435781 CWC25Q9NXE8 425 aaPredicted RBP26.77■■□□□ 1.88
GTF3A-203ENST00000435781 C21orf2O43822 256 aa26.76■■□□□ 1.87
GTF3A-203ENST00000435781 HOXA10P31260 410 aaPredicted RBP26.76■■□□□ 1.87
GTF3A-203ENST00000435781 DNAAF4Q8WXU2 420 aa26.76■■□□□ 1.87
GTF3A-203ENST00000435781 ZNF219Q9P2Y4 722 aaPredicted RBP26.76■■□□□ 1.87
GTF3A-203ENST00000435781 ALDH1B1P30837 517 aa26.75■■□□□ 1.87
GTF3A-203ENST00000435781 RTL5Q5HYW3 569 aaPredicted RBP26.75■■□□□ 1.87
GTF3A-203ENST00000435781 ZBTB38Q8NAP3 1195 aaPredicted RBP26.75■■□□□ 1.87
GTF3A-203ENST00000435781 MRPL50Q8N5N7 158 aaKnown RBP26.74■■□□□ 1.87
GTF3A-203ENST00000435781 SSH1Q8WYL5 1049 aa26.74■■□□□ 1.87
GTF3A-203ENST00000435781 NEURL1BA8MQ27 555 aa26.73■■□□□ 1.87
GTF3A-203ENST00000435781 PCCAP05165 728 aaPredicted RBP26.73■■□□□ 1.87
GTF3A-203ENST00000435781 CT47B1P0C2W7 299 aaPredicted RBP26.73■■□□□ 1.87
GTF3A-203ENST00000435781 CWF19L2Q2TBE0 894 aaKnown RBP26.73■■□□□ 1.87
GTF3A-203ENST00000435781 C7orf43Q8WVR3 580 aa26.73■■□□□ 1.87
GTF3A-203ENST00000435781 CRAMP1Q96RY5 1269 aa26.73■■□□□ 1.87
GTF3A-203ENST00000435781 DICER1Q9UPY3 1922 aaKnown RBP26.73■■□□□ 1.87
GTF3A-203ENST00000435781 F6X3S4 739 aa26.72■■□□□ 1.87
GTF3A-203ENST00000435781 IRS4O14654 1257 aaPredicted RBP26.72■■□□□ 1.87
GTF3A-203ENST00000435781 RASSF7Q02833 373 aa26.72■■□□□ 1.87
GTF3A-203ENST00000435781 RBM17Q96I25 401 aaKnown RBP26.72■■□□□ 1.87
GTF3A-203ENST00000435781 ZBED9Q6R2W3 1325 aa26.71■■□□□ 1.87
GTF3A-203ENST00000435781 ALDH1L2Q3SY69 923 aa26.71■■□□□ 1.87
GTF3A-203ENST00000435781 NFKBIEO00221 500 aa26.7■■□□□ 1.86
GTF3A-203ENST00000435781 SOGA3Q5TF21 947 aa26.7■■□□□ 1.86
GTF3A-203ENST00000435781 LINS1Q8NG48 757 aa26.7■■□□□ 1.86
GTF3A-203ENST00000435781 JARID2Q92833 1246 aaPredicted RBP26.7■■□□□ 1.86
GTF3A-203ENST00000435781 BCL2L13Q9BXK5 485 aa26.7■■□□□ 1.86
GTF3A-203ENST00000435781 ABCC4O15439 1325 aa26.68■■□□□ 1.86
GTF3A-203ENST00000435781 TIAM2Q8IVF5 1701 aa26.68■■□□□ 1.86
GTF3A-203ENST00000435781 CDHR2Q9BYE9 1310 aa26.67■■□□□ 1.86
GTF3A-203ENST00000435781 HSP90B1P14625 803 aaKnown RBP26.67■■□□□ 1.86
GTF3A-203ENST00000435781 GCKRQ14397 625 aa26.67■■□□□ 1.86
GTF3A-203ENST00000435781 SF3B3Q15393 1217 aaKnown RBP26.67■■□□□ 1.86
GTF3A-203ENST00000435781 CCDC93Q567U6 631 aa26.67■■□□□ 1.86
GTF3A-203ENST00000435781 C9orf131Q5VYM1 1079 aa26.67■■□□□ 1.86
GTF3A-203ENST00000435781 OLFM4Q6UX06 510 aa26.67■■□□□ 1.86
GTF3A-203ENST00000435781 SMC4Q9NTJ3 1288 aa26.67■■□□□ 1.86
GTF3A-203ENST00000435781 BEND3Q5T5X7 828 aa26.66■■□□□ 1.86
GTF3A-203ENST00000435781 PTPRCP08575 1304 aa26.65■■□□□ 1.86
GTF3A-203ENST00000435781 PPEF1O14829 653 aaPredicted RBP26.65■■□□□ 1.86
GTF3A-203ENST00000435781 PRELPP51888 382 aa26.65■■□□□ 1.86
GTF3A-203ENST00000435781 DDX46Q7L014 1031 aaKnown RBP26.65■■□□□ 1.86
GTF3A-203ENST00000435781 ZNF784Q8NCA9 323 aaPredicted RBP26.65■■□□□ 1.86
GTF3A-203ENST00000435781 RNF181Q9P0P0 153 aa26.65■■□□□ 1.86
GTF3A-203ENST00000435781 SNED1Q8TER0 1413 aa26.65■■□□□ 1.86
GTF3A-203ENST00000435781 LTBP3Q9NS15 1303 aa26.65■■□□□ 1.86
GTF3A-203ENST00000435781 COL4A1P02462 1669 aa26.64■■□□□ 1.86
GTF3A-203ENST00000435781 H7C1W4 665 aa26.64■■□□□ 1.86
GTF3A-203ENST00000435781 PDE8AO60658 829 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms