RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 TPCN1Q9ULQ1 816 aa12.47□□□□□ -0.41
SCAF4-203ENST00000434667 TYRO3Q06418 890 aa12.47□□□□□ -0.41
SCAF4-203ENST00000434667 ZRSR1Q15695 479 aaKnown RBP12.47□□□□□ -0.41
SCAF4-203ENST00000434667 EDC3Q96F86 508 aaKnown RBP12.47□□□□□ -0.41
SCAF4-203ENST00000434667 UVSSAQ2YD98 709 aa12.46□□□□□ -0.41
SCAF4-203ENST00000434667 LARP1BQ659C4 914 aaKnown RBP12.46□□□□□ -0.41
SCAF4-203ENST00000434667 CBX8Q9HC52 389 aa12.46□□□□□ -0.41
SCAF4-203ENST00000434667 RAD50Q92878 1312 aa12.46□□□□□ -0.41
SCAF4-203ENST00000434667 KCNQ3O43525 872 aa12.46□□□□□ -0.41
SCAF4-203ENST00000434667 TNNT1P13805 278 aa12.46□□□□□ -0.41
SCAF4-203ENST00000434667 ANAPC15P60006 121 aa12.46□□□□□ -0.41
SCAF4-203ENST00000434667 LRRC2Q9BYS8 371 aa12.46□□□□□ -0.41
SCAF4-203ENST00000434667 GTF2F1P35269 517 aaKnown RBP eCLIP12.46□□□□□ -0.42
SCAF4-203ENST00000434667 COL18A1P39060 1754 aa12.46□□□□□ -0.42
SCAF4-203ENST00000434667 USP6P35125 1406 aa12.45□□□□□ -0.42
SCAF4-203ENST00000434667 CACTINQ8WUQ7 758 aaKnown RBP12.45□□□□□ -0.42
SCAF4-203ENST00000434667 NR1I2O75469 434 aa12.45□□□□□ -0.42
SCAF4-203ENST00000434667 TAF7Q15545 349 aaPredicted RBP12.45□□□□□ -0.42
SCAF4-203ENST00000434667 CCAR2Q8N163 923 aaKnown RBP12.45□□□□□ -0.42
SCAF4-203ENST00000434667 EYA1Q99502 592 aa12.45□□□□□ -0.42
SCAF4-203ENST00000434667 DIAPH3Q9NSV4 1193 aa12.45□□□□□ -0.42
SCAF4-203ENST00000434667 ACEP12821 1306 aa12.45□□□□□ -0.42
SCAF4-203ENST00000434667 KLHDC4Q8TBB5 520 aa12.45□□□□□ -0.42
SCAF4-203ENST00000434667 BBXQ8WY36 941 aaPredicted RBP12.45□□□□□ -0.42
SCAF4-203ENST00000434667 CHMP4AQ9BY43 222 aa12.45□□□□□ -0.42
SCAF4-203ENST00000434667 SIL1Q9H173 461 aa12.45□□□□□ -0.42
SCAF4-203ENST00000434667 SLIT3O75094 1523 aa12.44□□□□□ -0.42
SCAF4-203ENST00000434667 JAK2O60674 1132 aa12.44□□□□□ -0.42
SCAF4-203ENST00000434667 GNAI3P08754 354 aa12.44□□□□□ -0.42
SCAF4-203ENST00000434667 CCDC192P0DO97 292 aa12.44□□□□□ -0.42
SCAF4-203ENST00000434667 TPD52L1Q16890 204 aaPredicted RBP12.44□□□□□ -0.42
SCAF4-203ENST00000434667 LARP1Q6PKG0 1096 aaKnown RBP12.44□□□□□ -0.42
SCAF4-203ENST00000434667 FILIP1Q7Z7B0 1213 aa12.44□□□□□ -0.42
SCAF4-203ENST00000434667 CCDC8Q9H0W5 538 aaPredicted RBP12.44□□□□□ -0.42
SCAF4-203ENST00000434667 ZFP91Q96JP5 570 aaPredicted RBP12.44□□□□□ -0.42
SCAF4-203ENST00000434667 NUP62CLQ9H1M0 184 aa12.44□□□□□ -0.42
SCAF4-203ENST00000434667 PARP4Q9UKK3 1724 aaKnown RBP12.44□□□□□ -0.42
SCAF4-203ENST00000434667 PTPN21Q16825 1174 aa12.44□□□□□ -0.42
SCAF4-203ENST00000434667 TNMDQ9H2S6 317 aa12.44□□□□□ -0.42
SCAF4-203ENST00000434667 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.44□□□□□ -0.42
SCAF4-203ENST00000434667 GORABQ5T7V8 394 aa12.43□□□□□ -0.42
SCAF4-203ENST00000434667 HDGFL1Q5TGJ6 251 aa12.43□□□□□ -0.42
SCAF4-203ENST00000434667 STAP2Q9UGK3 403 aa12.43□□□□□ -0.42
SCAF4-203ENST00000434667 USP16Q9Y5T5 823 aa12.43□□□□□ -0.42
SCAF4-203ENST00000434667 RAB11FIP3O75154 756 aa12.43□□□□□ -0.42
SCAF4-203ENST00000434667 AMPHP49418 695 aa12.43□□□□□ -0.42
SCAF4-203ENST00000434667 MAP3K11Q16584 847 aa12.43□□□□□ -0.42
SCAF4-203ENST00000434667 IL17REQ8NFR9 667 aa12.43□□□□□ -0.42
SCAF4-203ENST00000434667 TTC21BQ7Z4L5 1316 aa12.43□□□□□ -0.42
SCAF4-203ENST00000434667 PI4KAP2A4QPH2 592 aa12.43□□□□□ -0.42
SCAF4-203ENST00000434667 PI4KAP1Q8N8J0 262 aa12.43□□□□□ -0.42
SCAF4-203ENST00000434667 TMEM87AQ8NBN3 555 aa12.43□□□□□ -0.42
SCAF4-203ENST00000434667 BICD2Q8TD16 824 aa12.43□□□□□ -0.42
SCAF4-203ENST00000434667 ZSCAN25Q6NSZ9 544 aa12.42□□□□□ -0.42
SCAF4-203ENST00000434667 ANKRD7Q92527 254 aa12.42□□□□□ -0.42
SCAF4-203ENST00000434667 TLR7Q9NYK1 1049 aaKnown RBP12.42□□□□□ -0.42
SCAF4-203ENST00000434667 SLFNL1Q499Z3 407 aa12.42□□□□□ -0.42
SCAF4-203ENST00000434667 UTP14CQ5TAP6 766 aaKnown RBP12.42□□□□□ -0.42
SCAF4-203ENST00000434667 CNTROBQ8N137 903 aa12.42□□□□□ -0.42
SCAF4-203ENST00000434667 LRRN4CLQ8ND94 238 aa12.42□□□□□ -0.42
SCAF4-203ENST00000434667 FAM200AQ8TCP9 573 aa12.42□□□□□ -0.42
SCAF4-203ENST00000434667 CCDC30Q5VVM6 783 aa12.41□□□□□ -0.42
SCAF4-203ENST00000434667 BOLA2Q9H3K6 86 aa12.41□□□□□ -0.42
SCAF4-203ENST00000434667 CHPF2Q9P2E5 772 aa12.41□□□□□ -0.42
SCAF4-203ENST00000434667 CLIP2Q9UDT6 1046 aa12.41□□□□□ -0.42
SCAF4-203ENST00000434667 PRAMEF22A3QJZ6 481 aa12.41□□□□□ -0.42
SCAF4-203ENST00000434667 GUCY1B3Q02153 619 aa12.41□□□□□ -0.42
SCAF4-203ENST00000434667 DDX60Q8IY21 1712 aaKnown RBP12.41□□□□□ -0.42
SCAF4-203ENST00000434667 FMNL2Q96PY5 1086 aa12.41□□□□□ -0.42
SCAF4-203ENST00000434667 RBM8AQ9Y5S9 174 aaKnown RBP12.41□□□□□ -0.42
SCAF4-203ENST00000434667 CYP46A1Q9Y6A2 500 aa12.41□□□□□ -0.42
SCAF4-203ENST00000434667 PAPPAQ13219 1627 aa12.41□□□□□ -0.42
SCAF4-203ENST00000434667 CWF19L2Q2TBE0 894 aaKnown RBP12.41□□□□□ -0.42
SCAF4-203ENST00000434667 SPATA32Q96LK8 384 aa12.41□□□□□ -0.42
SCAF4-203ENST00000434667 SLC26A8Q96RN1 970 aa12.41□□□□□ -0.42
SCAF4-203ENST00000434667 ZNF215Q9UL58 517 aaPredicted RBP12.41□□□□□ -0.42
SCAF4-203ENST00000434667 ANKARQ7Z5J8 1434 aa12.4□□□□□ -0.42
SCAF4-203ENST00000434667 ZNF165P49910 485 aa12.4□□□□□ -0.42
SCAF4-203ENST00000434667 C11orf57Q6ZUT1 292 aaPredicted RBP12.4□□□□□ -0.42
SCAF4-203ENST00000434667 PGBD1Q96JS3 809 aa12.4□□□□□ -0.42
SCAF4-203ENST00000434667 XIRP1Q702N8 1843 aaKnown RBP12.4□□□□□ -0.42
SCAF4-203ENST00000434667 STRCP1A6NGW2 1772 aa12.4□□□□□ -0.42
SCAF4-203ENST00000434667 HSP90B1P14625 803 aaKnown RBP12.4□□□□□ -0.42
SCAF4-203ENST00000434667 SSH3Q8TE77 659 aa12.4□□□□□ -0.42
SCAF4-203ENST00000434667 RBM33Q96EV2 1170 aaKnown RBP12.4□□□□□ -0.42
SCAF4-203ENST00000434667 LGR6Q9HBX8 967 aa12.4□□□□□ -0.42
SCAF4-203ENST00000434667 CTNNA3Q9UI47 895 aa12.4□□□□□ -0.42
SCAF4-203ENST00000434667 PXDNLA1KZ92 1463 aa12.4□□□□□ -0.43
SCAF4-203ENST00000434667 PKD1L3Q7Z443 1732 aa12.4□□□□□ -0.43
SCAF4-203ENST00000434667 ZNF75DP51815 510 aa12.39□□□□□ -0.43
SCAF4-203ENST00000434667 NMIQ13287 307 aaPredicted RBP12.39□□□□□ -0.43
SCAF4-203ENST00000434667 SHANK3Q9BYB0 1731 aa12.39□□□□□ -0.43
SCAF4-203ENST00000434667 KRT85P78386 507 aa12.39□□□□□ -0.43
SCAF4-203ENST00000434667 ELF2Q15723 593 aa12.39□□□□□ -0.43
SCAF4-203ENST00000434667 CCDC129Q6ZRS4 1044 aa12.39□□□□□ -0.43
SCAF4-203ENST00000434667 AACSQ86V21 672 aa12.39□□□□□ -0.43
SCAF4-203ENST00000434667 CCDC112Q8NEF3 446 aa12.39□□□□□ -0.43
SCAF4-203ENST00000434667 A0A0D9SFI3 127 aa12.39□□□□□ -0.43
SCAF4-203ENST00000434667 CTIFO43310 598 aaKnown RBP12.39□□□□□ -0.43
SCAF4-203ENST00000434667 LETM1O95202 739 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms