RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 SOGA3Q5TF21 947 aa26.2■■□□□ 1.78
LMBR1-208ENST00000434278 C3orf67Q6ZVT6 689 aa26.2■■□□□ 1.78
LMBR1-208ENST00000434278 NLRP10Q86W26 655 aa26.2■■□□□ 1.78
LMBR1-208ENST00000434278 UTP14AQ9BVJ6 771 aaKnown RBP26.2■■□□□ 1.78
LMBR1-208ENST00000434278 TAOK3Q9H2K8 898 aa26.2■■□□□ 1.78
LMBR1-208ENST00000434278 TIAM2Q8IVF5 1701 aa26.19■■□□□ 1.78
LMBR1-208ENST00000434278 ALDH1B1P30837 517 aa26.19■■□□□ 1.78
LMBR1-208ENST00000434278 OLFM4Q6UX06 510 aa26.19■■□□□ 1.78
LMBR1-208ENST00000434278 HYPKQ9NX55 129 aa26.19■■□□□ 1.78
LMBR1-208ENST00000434278 KDM2BQ8NHM5 1336 aa26.18■■□□□ 1.78
LMBR1-208ENST00000434278 ANKRD13DQ6ZTN6 518 aa26.18■■□□□ 1.78
LMBR1-208ENST00000434278 PLBD2Q8NHP8 589 aa26.18■■□□□ 1.78
LMBR1-208ENST00000434278 TSR2Q969E8 191 aaKnown RBP26.18■■□□□ 1.78
LMBR1-208ENST00000434278 HOXA10P31260 410 aaPredicted RBP26.17■■□□□ 1.78
LMBR1-208ENST00000434278 CCDC93Q567U6 631 aa26.17■■□□□ 1.78
LMBR1-208ENST00000434278 SLC10A5Q5PT55 438 aa26.17■■□□□ 1.78
LMBR1-208ENST00000434278 NCBP3Q53F19 620 aaKnown RBP26.16■■□□□ 1.78
LMBR1-208ENST00000434278 TSPYL6Q8N831 410 aa26.16■■□□□ 1.78
LMBR1-208ENST00000434278 RPGRQ92834 1020 aaKnown RBP26.16■■□□□ 1.78
LMBR1-208ENST00000434278 DICER1Q9UPY3 1922 aaKnown RBP26.16■■□□□ 1.78
LMBR1-208ENST00000434278 PHAXQ9H814 394 aaKnown RBP26.15■■□□□ 1.78
LMBR1-208ENST00000434278 RRAGCQ9HB90 399 aa26.15■■□□□ 1.78
LMBR1-208ENST00000434278 GLTPD2A6NH11 291 aa26.14■■□□□ 1.78
LMBR1-208ENST00000434278 SYNE4Q8N205 404 aa26.14■■□□□ 1.78
LMBR1-208ENST00000434278 ZNF428Q96B54 188 aa26.14■■□□□ 1.78
LMBR1-208ENST00000434278 NLRP3Q96P20 1036 aa26.14■■□□□ 1.78
LMBR1-208ENST00000434278 RNF123Q5XPI4 1314 aa26.14■■□□□ 1.77
LMBR1-208ENST00000434278 ISCA1Q9BUE6 129 aa26.13■■□□□ 1.77
LMBR1-208ENST00000434278 TRMT112Q9UI30 125 aaKnown RBP26.13■■□□□ 1.77
LMBR1-208ENST00000434278 SALL2Q9Y467 1007 aaPredicted RBP26.13■■□□□ 1.77
LMBR1-208ENST00000434278 TOMM70O94826 608 aa26.12■■□□□ 1.77
LMBR1-208ENST00000434278 FAM9BQ8IZU0 186 aa26.12■■□□□ 1.77
LMBR1-208ENST00000434278 RBM17Q96I25 401 aaKnown RBP26.12■■□□□ 1.77
LMBR1-208ENST00000434278 CRAMP1Q96RY5 1269 aa26.12■■□□□ 1.77
LMBR1-208ENST00000434278 IL16Q14005 1332 aa26.12■■□□□ 1.77
LMBR1-208ENST00000434278 ATP5J2-PTCD1G3V325 749 aa26.11■■□□□ 1.77
LMBR1-208ENST00000434278 HCLS1P14317 486 aaPredicted RBP26.11■■□□□ 1.77
LMBR1-208ENST00000434278 FKBP4Q02790 459 aaKnown RBP eCLIP26.11■■□□□ 1.77
LMBR1-208ENST00000434278 RTKN2Q8IZC4 609 aa26.11■■□□□ 1.77
LMBR1-208ENST00000434278 SNED1Q8TER0 1413 aa26.11■■□□□ 1.77
LMBR1-208ENST00000434278 SH3TC1Q8TE82 1336 aa26.11■■□□□ 1.77
LMBR1-208ENST00000434278 CCDC30Q5VVM6 783 aa26.1■■□□□ 1.77
LMBR1-208ENST00000434278 SLC51AQ86UW1 340 aa26.1■■□□□ 1.77
LMBR1-208ENST00000434278 LAMB2P55268 1798 aa26.1■■□□□ 1.77
LMBR1-208ENST00000434278 ZNF277Q9NRM2 450 aaPredicted RBP26.09■■□□□ 1.77
LMBR1-208ENST00000434278 GOLGA2Q08379 1002 aa26.08■■□□□ 1.77
LMBR1-208ENST00000434278 RIC3Q7Z5B4 369 aa26.08■■□□□ 1.77
LMBR1-208ENST00000434278 TCERG1O14776 1098 aaKnown RBP26.07■■□□□ 1.76
LMBR1-208ENST00000434278 PPEF1O14829 653 aaPredicted RBP26.06■■□□□ 1.76
LMBR1-208ENST00000434278 HSPA6P17066 643 aa26.06■■□□□ 1.76
LMBR1-208ENST00000434278 TRIM28Q13263 835 aaKnown RBP26.06■■□□□ 1.76
LMBR1-208ENST00000434278 TWISTNBQ3B726 338 aaPredicted RBP26.06■■□□□ 1.76
LMBR1-208ENST00000434278 CC2D2BQ6DHV5 1058 aa26.06■■□□□ 1.76
LMBR1-208ENST00000434278 DPY19L2Q6NUT2 758 aa26.06■■□□□ 1.76
LMBR1-208ENST00000434278 WDR63Q8IWG1 891 aa26.06■■□□□ 1.76
LMBR1-208ENST00000434278 C16orf71Q8IYS4 520 aaPredicted RBP26.06■■□□□ 1.76
LMBR1-208ENST00000434278 FAM89AQ96GI7 184 aa26.06■■□□□ 1.76
LMBR1-208ENST00000434278 CHMP4AQ9BY43 222 aa26.06■■□□□ 1.76
LMBR1-208ENST00000434278 ABCC4O15439 1325 aa26.06■■□□□ 1.76
LMBR1-208ENST00000434278 RBM46Q8TBY0 533 aaKnown RBP26.05■■□□□ 1.76
LMBR1-208ENST00000434278 FANCIQ9NVI1 1328 aa26.05■■□□□ 1.76
LMBR1-208ENST00000434278 DDX60Q8IY21 1712 aaKnown RBP26.05■■□□□ 1.76
LMBR1-208ENST00000434278 POTECB2RU33 542 aa26.04■■□□□ 1.76
LMBR1-208ENST00000434278 PSMD1Q99460 953 aa26.04■■□□□ 1.76
LMBR1-208ENST00000434278 WDR90Q96KV7 1748 aa26.04■■□□□ 1.76
LMBR1-208ENST00000434278 VEGFAP15692 232 aaPredicted RBP26.03■■□□□ 1.76
LMBR1-208ENST00000434278 IARSP41252 1262 aaKnown RBP26.03■■□□□ 1.76
LMBR1-208ENST00000434278 MYD88Q99836 296 aa26.03■■□□□ 1.76
LMBR1-208ENST00000434278 DDNO94850 711 aaPredicted RBP26.02■■□□□ 1.76
LMBR1-208ENST00000434278 RTL5Q5HYW3 569 aaPredicted RBP26.02■■□□□ 1.76
LMBR1-208ENST00000434278 SPINK5Q9NQ38 1064 aaPredicted RBP26.02■■□□□ 1.76
LMBR1-208ENST00000434278 ATP6V0A2Q9Y487 856 aa26.01■■□□□ 1.75
LMBR1-208ENST00000434278 DDX58O95786 925 aaKnown RBP26■■□□□ 1.75
LMBR1-208ENST00000434278 GRIPAP1Q4V328 841 aa26■■□□□ 1.75
LMBR1-208ENST00000434278 DDX46Q7L014 1031 aaKnown RBP26■■□□□ 1.75
LMBR1-208ENST00000434278 METTL22Q9BUU2 404 aaPredicted RBP26■■□□□ 1.75
LMBR1-208ENST00000434278 STK31Q9BXU1 1019 aa26■■□□□ 1.75
LMBR1-208ENST00000434278 ZNF541Q9H0D2 1346 aa25.99■■□□□ 1.75
LMBR1-208ENST00000434278 BBOX1O75936 387 aa25.99■■□□□ 1.75
LMBR1-208ENST00000434278 G2E3Q7L622 706 aa25.99■■□□□ 1.75
LMBR1-208ENST00000434278 MAP3K2Q9Y2U5 619 aa25.99■■□□□ 1.75
LMBR1-208ENST00000434278 TAF1P21675 1872 aa25.99■■□□□ 1.75
LMBR1-208ENST00000434278 GRAPQ13588 217 aa25.98■■□□□ 1.75
LMBR1-208ENST00000434278 SF3B3Q15393 1217 aaKnown RBP25.98■■□□□ 1.75
LMBR1-208ENST00000434278 KSR2Q6VAB6 950 aa25.98■■□□□ 1.75
LMBR1-208ENST00000434278 GRAPLQ8TC17 118 aaPredicted RBP25.98■■□□□ 1.75
LMBR1-208ENST00000434278 COL4A5P29400 1685 aa25.98■■□□□ 1.75
LMBR1-208ENST00000434278 PI4KAP2A4QPH2 592 aa25.97■■□□□ 1.75
LMBR1-208ENST00000434278 IRS4O14654 1257 aaPredicted RBP25.97■■□□□ 1.75
LMBR1-208ENST00000434278 VAMP4O75379 141 aa25.97■■□□□ 1.75
LMBR1-208ENST00000434278 SLC4A2P04920 1241 aa25.97■■□□□ 1.75
LMBR1-208ENST00000434278 EXOSC9Q06265 439 aaKnown RBP25.97■■□□□ 1.75
LMBR1-208ENST00000434278 FSTL1Q12841 308 aa25.97■■□□□ 1.75
LMBR1-208ENST00000434278 PI4KAP1Q8N8J0 262 aa25.97■■□□□ 1.75
LMBR1-208ENST00000434278 ZBTB38Q8NAP3 1195 aaPredicted RBP25.97■■□□□ 1.75
LMBR1-208ENST00000434278 CCDC191Q8NCU4 936 aa25.97■■□□□ 1.75
LMBR1-208ENST00000434278 FZD9O00144 591 aa25.96■■□□□ 1.75
LMBR1-208ENST00000434278 SP8Q8IXZ3 490 aa25.96■■□□□ 1.75
LMBR1-208ENST00000434278 TMX4Q9H1E5 349 aaPredicted RBP25.95■■□□□ 1.74
LMBR1-208ENST00000434278 CWC25Q9NXE8 425 aaPredicted RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms