RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 NOLC1Q14978 699 aaKnown RBP eCLIP17.64■□□□□ 0.42
DDX56-205ENST00000433257 FOXD4L5Q5VV16 416 aaPredicted RBP17.64■□□□□ 0.42
DDX56-205ENST00000433257 ERC1Q8IUD2 1116 aa17.64■□□□□ 0.42
DDX56-205ENST00000433257 FOXD4L4Q8WXT5 416 aaPredicted RBP17.64■□□□□ 0.42
DDX56-205ENST00000433257 COL18A1P39060 1754 aa17.64■□□□□ 0.42
DDX56-205ENST00000433257 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.64■□□□□ 0.42
DDX56-205ENST00000433257 PDCP20941 246 aa17.64■□□□□ 0.41
DDX56-205ENST00000433257 RHPN1Q8TCX5 695 aa17.64■□□□□ 0.41
DDX56-205ENST00000433257 USP44Q9H0E7 712 aa17.64■□□□□ 0.41
DDX56-205ENST00000433257 NLRP2Q9NX02 1062 aa17.64■□□□□ 0.41
DDX56-205ENST00000433257 SNX14Q9Y5W7 946 aa17.64■□□□□ 0.41
DDX56-205ENST00000433257 SPATA31A1Q5TZJ5 1347 aa17.63■□□□□ 0.41
DDX56-205ENST00000433257 ADCY5O95622 1261 aa17.63■□□□□ 0.41
DDX56-205ENST00000433257 RBM10P98175 930 aaKnown RBP17.63■□□□□ 0.41
DDX56-205ENST00000433257 PI4K2BQ8TCG2 481 aa17.63■□□□□ 0.41
DDX56-205ENST00000433257 KCNB2Q92953 911 aa17.63■□□□□ 0.41
DDX56-205ENST00000433257 CCDC94Q9BW85 323 aaPredicted RBP17.63■□□□□ 0.41
DDX56-205ENST00000433257 UPF3BQ9BZI7 483 aaKnown RBP17.63■□□□□ 0.41
DDX56-205ENST00000433257 LSG1Q9H089 658 aaKnown RBP17.63■□□□□ 0.41
DDX56-205ENST00000433257 THRAP3Q9Y2W1 955 aaKnown RBP17.62■□□□□ 0.41
DDX56-205ENST00000433257 A0A0G2JS52 829 aa17.61■□□□□ 0.41
DDX56-205ENST00000433257 SURF6O75683 361 aaKnown RBP17.61■□□□□ 0.41
DDX56-205ENST00000433257 CCDC192P0DO97 292 aa17.61■□□□□ 0.41
DDX56-205ENST00000433257 EYA1Q99502 592 aa17.61■□□□□ 0.41
DDX56-205ENST00000433257 CARD10Q9BWT7 1032 aa17.61■□□□□ 0.41
DDX56-205ENST00000433257 NRAPQ86VF7 1730 aa17.61■□□□□ 0.41
DDX56-205ENST00000433257 ELP1O95163 1332 aa17.61■□□□□ 0.41
DDX56-205ENST00000433257 GADD45BO75293 160 aaPredicted RBP17.61■□□□□ 0.41
DDX56-205ENST00000433257 SYT1P21579 422 aa17.61■□□□□ 0.41
DDX56-205ENST00000433257 AK2P54819 239 aa17.61■□□□□ 0.41
DDX56-205ENST00000433257 ANKRD1Q15327 319 aa17.61■□□□□ 0.41
DDX56-205ENST00000433257 FAM98CQ17RN3 349 aaKnown RBP17.61■□□□□ 0.41
DDX56-205ENST00000433257 RGPD5Q99666 1765 aa17.61■□□□□ 0.41
DDX56-205ENST00000433257 CAVIN2O95810 425 aa17.6■□□□□ 0.41
DDX56-205ENST00000433257 ZKSCAN1P17029 563 aaPredicted RBP17.6■□□□□ 0.41
DDX56-205ENST00000433257 PSMA5P28066 241 aa17.6■□□□□ 0.41
DDX56-205ENST00000433257 MTX1Q13505 466 aa17.6■□□□□ 0.41
DDX56-205ENST00000433257 HDGFL1Q5TGJ6 251 aa17.6■□□□□ 0.41
DDX56-205ENST00000433257 MIS18AQ9NYP9 233 aa17.6■□□□□ 0.41
DDX56-205ENST00000433257 CYP46A1Q9Y6A2 500 aa17.6■□□□□ 0.41
DDX56-205ENST00000433257 NOL8Q76FK4 1167 aaKnown RBP17.59■□□□□ 0.41
DDX56-205ENST00000433257 PPP1R42Q7Z4L9 355 aa17.59■□□□□ 0.41
DDX56-205ENST00000433257 FUCA2Q9BTY2 467 aa17.59■□□□□ 0.41
DDX56-205ENST00000433257 CNPY2Q9Y2B0 182 aa17.59■□□□□ 0.41
DDX56-205ENST00000433257 KIF3AQ9Y496 699 aa17.59■□□□□ 0.41
DDX56-205ENST00000433257 ONECUT3O60422 494 aaPredicted RBP17.58■□□□□ 0.41
DDX56-205ENST00000433257 BARGINQ6ZT62 677 aa17.58■□□□□ 0.41
DDX56-205ENST00000433257 ALDH8A1Q9H2A2 487 aaPredicted RBP17.58■□□□□ 0.41
DDX56-205ENST00000433257 TCHHQ07283 1943 aa17.58■□□□□ 0.4
DDX56-205ENST00000433257 TSHZ3Q63HK5 1081 aa17.58■□□□□ 0.4
DDX56-205ENST00000433257 CLASRPQ8N2M8 674 aaKnown RBP17.58■□□□□ 0.4
DDX56-205ENST00000433257 ZSWIM6Q9HCJ5 1215 aa17.58■□□□□ 0.4
DDX56-205ENST00000433257 PDRG1Q9NUG6 133 aa17.58■□□□□ 0.4
DDX56-205ENST00000433257 ALDH1L1O75891 902 aa17.57■□□□□ 0.4
DDX56-205ENST00000433257 HCLS1P14317 486 aaPredicted RBP17.57■□□□□ 0.4
DDX56-205ENST00000433257 KRT85P78386 507 aa17.57■□□□□ 0.4
DDX56-205ENST00000433257 UTP14CQ5TAP6 766 aaKnown RBP17.57■□□□□ 0.4
DDX56-205ENST00000433257 SEPT12Q8IYM1 358 aa17.57■□□□□ 0.4
DDX56-205ENST00000433257 EVI5LQ96CN4 794 aa17.57■□□□□ 0.4
DDX56-205ENST00000433257 HYPKQ9NX55 129 aa17.57■□□□□ 0.4
DDX56-205ENST00000433257 KDM3BQ7LBC6 1761 aa17.57■□□□□ 0.4
DDX56-205ENST00000433257 SRGAP3O43295 1099 aa17.56■□□□□ 0.4
DDX56-205ENST00000433257 SYCP1Q15431 976 aa17.56■□□□□ 0.4
DDX56-205ENST00000433257 RNF20Q5VTR2 975 aa17.56■□□□□ 0.4
DDX56-205ENST00000433257 NBPF6Q5VWK0 638 aa17.56■□□□□ 0.4
DDX56-205ENST00000433257 RUFY3Q7L099 469 aa17.56■□□□□ 0.4
DDX56-205ENST00000433257 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.56■□□□□ 0.4
DDX56-205ENST00000433257 NBPF4Q96M43 638 aa17.56■□□□□ 0.4
DDX56-205ENST00000433257 CDCA7Q9BWT1 371 aaPredicted RBP17.56■□□□□ 0.4
DDX56-205ENST00000433257 CEMIPQ8WUJ3 1361 aa17.55■□□□□ 0.4
DDX56-205ENST00000433257 CASTP20810 708 aaKnown RBP17.55■□□□□ 0.4
DDX56-205ENST00000433257 NUTM1Q86Y26 1132 aa17.55■□□□□ 0.4
DDX56-205ENST00000433257 FAM200AQ8TCP9 573 aa17.55■□□□□ 0.4
DDX56-205ENST00000433257 DNAAF4Q8WXU2 420 aa17.55■□□□□ 0.4
DDX56-205ENST00000433257 SCAND2PQ9GZW5 306 aaPredicted RBP17.55■□□□□ 0.4
DDX56-205ENST00000433257 IL1RAPL2Q9NP60 686 aa17.55■□□□□ 0.4
DDX56-205ENST00000433257 ECHDC1Q9NTX5 307 aa17.55■□□□□ 0.4
DDX56-205ENST00000433257 MTMR6Q9Y217 621 aa17.55■□□□□ 0.4
DDX56-205ENST00000433257 OVOS2A0A0G2JMS6 1433 aa17.55■□□□□ 0.4
DDX56-205ENST00000433257 GLI3P10071 1580 aa17.55■□□□□ 0.4
DDX56-205ENST00000433257 GJB2P29033 226 aa17.55■□□□□ 0.4
DDX56-205ENST00000433257 GDPD2Q9HCC8 539 aa17.55■□□□□ 0.4
DDX56-205ENST00000433257 SNRKQ9NRH2 765 aa17.55■□□□□ 0.4
DDX56-205ENST00000433257 FIBPO43427 364 aa17.54■□□□□ 0.4
DDX56-205ENST00000433257 MAP3K11Q16584 847 aa17.54■□□□□ 0.4
DDX56-205ENST00000433257 KIAA1524Q8TCG1 905 aa17.54■□□□□ 0.4
DDX56-205ENST00000433257 CHAMP1Q96JM3 812 aa17.54■□□□□ 0.4
DDX56-205ENST00000433257 DDX19AQ9NUU7 478 aaKnown RBP17.54■□□□□ 0.4
DDX56-205ENST00000433257 NCAPD2Q15021 1401 aa17.53■□□□□ 0.4
DDX56-205ENST00000433257 IL2RBP14784 551 aa17.53■□□□□ 0.4
DDX56-205ENST00000433257 OS9Q13438 667 aaPredicted RBP17.53■□□□□ 0.4
DDX56-205ENST00000433257 ILDR2Q71H61 639 aa17.53■□□□□ 0.4
DDX56-205ENST00000433257 HMG20BQ9P0W2 317 aa17.53■□□□□ 0.4
DDX56-205ENST00000433257 BEND3Q5T5X7 828 aa17.52■□□□□ 0.4
DDX56-205ENST00000433257 USHBP1Q8N6Y0 703 aa17.52■□□□□ 0.4
DDX56-205ENST00000433257 EXOC5O00471 708 aa17.52■□□□□ 0.39
DDX56-205ENST00000433257 IL17REQ8NFR9 667 aa17.52■□□□□ 0.39
DDX56-205ENST00000433257 RAPGEF4Q8WZA2 1011 aa17.52■□□□□ 0.39
DDX56-205ENST00000433257 JAKMIP1Q96N16 626 aaKnown RBP17.52■□□□□ 0.39
DDX56-205ENST00000433257 GTPBP4Q9BZE4 634 aaKnown RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms