RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 ZNF142P52746 1687 aaPredicted RBP22.22■■□□□ 1.15
CHD1L-204ENST00000431239 KDM6AO15550 1401 aaPredicted RBP22.22■■□□□ 1.15
CHD1L-204ENST00000431239 NEURL1BA8MQ27 555 aa22.22■■□□□ 1.15
CHD1L-204ENST00000431239 TSPY26PQ9H489 355 aa22.22■■□□□ 1.15
CHD1L-204ENST00000431239 SYAP1Q96A49 352 aaPredicted RBP22.21■■□□□ 1.15
CHD1L-204ENST00000431239 USP16Q9Y5T5 823 aa22.21■■□□□ 1.15
CHD1L-204ENST00000431239 OVOS2A0A0G2JMS6 1433 aa22.21■■□□□ 1.15
CHD1L-204ENST00000431239 LARP1Q6PKG0 1096 aaKnown RBP22.21■■□□□ 1.15
CHD1L-204ENST00000431239 CCDC9Q9Y3X0 531 aaKnown RBP22.21■■□□□ 1.15
CHD1L-204ENST00000431239 TAF6LQ9Y6J9 622 aa22.2■■□□□ 1.15
CHD1L-204ENST00000431239 VPS37CA5D8V6 355 aaPredicted RBP22.2■■□□□ 1.14
CHD1L-204ENST00000431239 PHKG2P15735 406 aa22.2■■□□□ 1.14
CHD1L-204ENST00000431239 ZKSCAN1P17029 563 aaPredicted RBP22.2■■□□□ 1.14
CHD1L-204ENST00000431239 TATP17735 454 aaPredicted RBP22.2■■□□□ 1.14
CHD1L-204ENST00000431239 GCKRQ14397 625 aa22.2■■□□□ 1.14
CHD1L-204ENST00000431239 CREB3L3Q68CJ9 461 aa22.2■■□□□ 1.14
CHD1L-204ENST00000431239 PDLIM2Q96JY6 352 aa22.2■■□□□ 1.14
CHD1L-204ENST00000431239 C1orf167Q5SNV9 1468 aa22.2■■□□□ 1.14
CHD1L-204ENST00000431239 SIPA1L3O60292 1781 aaPredicted RBP22.19■■□□□ 1.14
CHD1L-204ENST00000431239 ATP5J2-PTCD1G3V325 749 aa22.19■■□□□ 1.14
CHD1L-204ENST00000431239 PTCD1O75127 700 aaKnown RBP22.19■■□□□ 1.14
CHD1L-204ENST00000431239 F13A1P00488 732 aa22.19■■□□□ 1.14
CHD1L-204ENST00000431239 NECTIN1Q15223 517 aa22.19■■□□□ 1.14
CHD1L-204ENST00000431239 C5P01031 1676 aa22.19■■□□□ 1.14
CHD1L-204ENST00000431239 ME3Q16798 604 aa22.19■■□□□ 1.14
CHD1L-204ENST00000431239 MPNDQ8N594 471 aa22.19■■□□□ 1.14
CHD1L-204ENST00000431239 TRPM3Q9HCF6 1732 aaPredicted RBP22.19■■□□□ 1.14
CHD1L-204ENST00000431239 MEGF6O75095 1541 aa22.18■■□□□ 1.14
CHD1L-204ENST00000431239 VPS53Q5VIR6 699 aa22.18■■□□□ 1.14
CHD1L-204ENST00000431239 ZSWIM6Q9HCJ5 1215 aa22.18■■□□□ 1.14
CHD1L-204ENST00000431239 UTYO14607 1347 aa22.18■■□□□ 1.14
CHD1L-204ENST00000431239 ST3GAL1Q11201 340 aa22.18■■□□□ 1.14
CHD1L-204ENST00000431239 UBE3BQ7Z3V4 1068 aa22.18■■□□□ 1.14
CHD1L-204ENST00000431239 TTC5Q8N0Z6 440 aa22.18■■□□□ 1.14
CHD1L-204ENST00000431239 CHGBP05060 677 aa22.17■■□□□ 1.14
CHD1L-204ENST00000431239 DNM1Q05193 864 aaKnown RBP22.17■■□□□ 1.14
CHD1L-204ENST00000431239 ZNF589Q86UQ0 364 aaPredicted RBP22.17■■□□□ 1.14
CHD1L-204ENST00000431239 ANKRD13DQ6ZTN6 518 aa22.17■■□□□ 1.14
CHD1L-204ENST00000431239 TPCN1Q9ULQ1 816 aa22.17■■□□□ 1.14
CHD1L-204ENST00000431239 SLC27A2O14975 620 aa22.16■■□□□ 1.14
CHD1L-204ENST00000431239 METTL22Q9BUU2 404 aaPredicted RBP22.16■■□□□ 1.14
CHD1L-204ENST00000431239 C19orf44Q9H6X5 657 aa22.16■■□□□ 1.14
CHD1L-204ENST00000431239 FERMT3Q86UX7 667 aa22.15■■□□□ 1.14
CHD1L-204ENST00000431239 MAP4K1Q92918 833 aa22.15■■□□□ 1.14
CHD1L-204ENST00000431239 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.15■■□□□ 1.14
CHD1L-204ENST00000431239 CAMTA1Q9Y6Y1 1673 aa22.14■■□□□ 1.14
CHD1L-204ENST00000431239 CYP27B1O15528 508 aa22.14■■□□□ 1.14
CHD1L-204ENST00000431239 IFNL2Q8IZJ0 200 aa22.14■■□□□ 1.14
CHD1L-204ENST00000431239 PHF14O94880 888 aa22.14■■□□□ 1.13
CHD1L-204ENST00000431239 ATF3P18847 181 aa22.14■■□□□ 1.13
CHD1L-204ENST00000431239 MTMR6Q9Y217 621 aa22.14■■□□□ 1.13
CHD1L-204ENST00000431239 TFCP2Q12800 502 aa22.13■■□□□ 1.13
CHD1L-204ENST00000431239 STK3Q13188 491 aa22.13■■□□□ 1.13
CHD1L-204ENST00000431239 DNAJC2Q99543 621 aaKnown RBP22.13■■□□□ 1.13
CHD1L-204ENST00000431239 DBNLQ9UJU6 430 aaKnown RBP22.13■■□□□ 1.13
CHD1L-204ENST00000431239 NOL7Q9UMY1 257 aaKnown RBP22.13■■□□□ 1.13
CHD1L-204ENST00000431239 CHMP3Q9Y3E7 222 aa22.13■■□□□ 1.13
CHD1L-204ENST00000431239 PTMAP06454 111 aaKnown RBP22.13■■□□□ 1.13
CHD1L-204ENST00000431239 TM6SF1Q9BZW5 370 aa22.13■■□□□ 1.13
CHD1L-204ENST00000431239 HIP1O00291 1037 aa22.12■■□□□ 1.13
CHD1L-204ENST00000431239 SNRPA1P09661 255 aaKnown RBP22.12■■□□□ 1.13
CHD1L-204ENST00000431239 FAM173BQ6P4H8 233 aa22.12■■□□□ 1.13
CHD1L-204ENST00000431239 SH2B1Q9NRF2 756 aaPredicted RBP22.12■■□□□ 1.13
CHD1L-204ENST00000431239 CCDC183Q5T5S1 534 aa22.12■■□□□ 1.13
CHD1L-204ENST00000431239 TMEM87AQ8NBN3 555 aa22.12■■□□□ 1.13
CHD1L-204ENST00000431239 A0A087WZG4 1122 aa22.11■■□□□ 1.13
CHD1L-204ENST00000431239 HCLS1P14317 486 aaPredicted RBP22.11■■□□□ 1.13
CHD1L-204ENST00000431239 UBE2HP62256 183 aa22.11■■□□□ 1.13
CHD1L-204ENST00000431239 BLOC1S2Q6QNY1 142 aa22.11■■□□□ 1.13
CHD1L-204ENST00000431239 ZSCAN31Q96LW9 406 aaPredicted RBP22.11■■□□□ 1.13
CHD1L-204ENST00000431239 CCDC129Q6ZRS4 1044 aa22.11■■□□□ 1.13
CHD1L-204ENST00000431239 KCNB2Q92953 911 aa22.11■■□□□ 1.13
CHD1L-204ENST00000431239 ATP6V1DQ9Y5K8 247 aa22.11■■□□□ 1.13
CHD1L-204ENST00000431239 SCN11AQ9UI33 1791 aa22.11■■□□□ 1.13
CHD1L-204ENST00000431239 PTPN12Q05209 780 aaKnown RBP22.1■■□□□ 1.13
CHD1L-204ENST00000431239 LARP1BQ659C4 914 aaKnown RBP22.1■■□□□ 1.13
CHD1L-204ENST00000431239 GIMAP6Q6P9H5 292 aa22.1■■□□□ 1.13
CHD1L-204ENST00000431239 CDC37L1Q7L3B6 337 aa22.1■■□□□ 1.13
CHD1L-204ENST00000431239 LRP10Q7Z4F1 713 aa22.1■■□□□ 1.13
CHD1L-204ENST00000431239 USP25Q9UHP3 1055 aa22.1■■□□□ 1.13
CHD1L-204ENST00000431239 CABP4P57796 275 aa22.09■■□□□ 1.13
CHD1L-204ENST00000431239 HS1BP3Q53T59 392 aa22.09■■□□□ 1.13
CHD1L-204ENST00000431239 TNNI3KQ59H18 835 aa22.09■■□□□ 1.13
CHD1L-204ENST00000431239 FMNL2Q96PY5 1086 aa22.09■■□□□ 1.13
CHD1L-204ENST00000431239 SEC62Q99442 399 aaKnown RBP22.09■■□□□ 1.13
CHD1L-204ENST00000431239 DBNDD2Q9BQY9 259 aa22.09■■□□□ 1.13
CHD1L-204ENST00000431239 FPGT-TNNI3KV9GXZ4 949 aa22.09■■□□□ 1.13
CHD1L-204ENST00000431239 ADAMTS7Q9UKP4 1686 aa22.09■■□□□ 1.13
CHD1L-204ENST00000431239 ZKSCAN5Q9Y2L8 839 aa22.09■■□□□ 1.13
CHD1L-204ENST00000431239 PSMA5P28066 241 aa22.08■■□□□ 1.13
CHD1L-204ENST00000431239 RNF20Q5VTR2 975 aa22.08■■□□□ 1.13
CHD1L-204ENST00000431239 DDX46Q7L014 1031 aaKnown RBP22.08■■□□□ 1.13
CHD1L-204ENST00000431239 DCAF5Q96JK2 942 aa22.08■■□□□ 1.13
CHD1L-204ENST00000431239 PLCB2Q00722 1185 aa22.08■■□□□ 1.12
CHD1L-204ENST00000431239 MED23Q9ULK4 1368 aa22.08■■□□□ 1.12
CHD1L-204ENST00000431239 RFX5P48382 616 aaPredicted RBP22.07■■□□□ 1.12
CHD1L-204ENST00000431239 TMEM94Q12767 1356 aa22.07■■□□□ 1.12
CHD1L-204ENST00000431239 CCDC39Q9UFE4 941 aa22.07■■□□□ 1.12
CHD1L-204ENST00000431239 ADAMTSL3P82987 1691 aa22.07■■□□□ 1.12
CHD1L-204ENST00000431239 OFD1O75665 1012 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms