RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 LMOD1P29536 600 aaPredicted RBP29.43■■■□□ 2.3
PTPRA-207ENST00000431048 ABHD8Q96I13 439 aa29.42■■■□□ 2.3
PTPRA-207ENST00000431048 GJA3Q9Y6H8 435 aa29.42■■■□□ 2.3
PTPRA-207ENST00000431048 RIC1Q4ADV7 1423 aa29.42■■■□□ 2.3
PTPRA-207ENST00000431048 ABCC12Q96J65 1359 aa29.41■■■□□ 2.3
PTPRA-207ENST00000431048 NUTM1Q86Y26 1132 aa29.41■■■□□ 2.3
PTPRA-207ENST00000431048 MAP3K15Q6ZN16 1313 aa29.41■■■□□ 2.3
PTPRA-207ENST00000431048 IBTKQ9P2D0 1353 aaPredicted RBP29.4■■■□□ 2.3
PTPRA-207ENST00000431048 SCNN1DP51172 638 aa29.4■■■□□ 2.3
PTPRA-207ENST00000431048 USP50Q70EL3 339 aaPredicted RBP29.4■■■□□ 2.3
PTPRA-207ENST00000431048 RPGRQ92834 1020 aaKnown RBP29.4■■■□□ 2.3
PTPRA-207ENST00000431048 CRAMP1Q96RY5 1269 aa29.4■■■□□ 2.3
PTPRA-207ENST00000431048 ECE1P42892 770 aa29.39■■■□□ 2.3
PTPRA-207ENST00000431048 PNISRQ8TF01 805 aaKnown RBP29.39■■■□□ 2.3
PTPRA-207ENST00000431048 COL4A5P29400 1685 aa29.39■■■□□ 2.3
PTPRA-207ENST00000431048 EPS15P42566 896 aa29.38■■■□□ 2.29
PTPRA-207ENST00000431048 LARGE2Q8N3Y3 721 aa29.38■■■□□ 2.29
PTPRA-207ENST00000431048 MIS18AQ9NYP9 233 aa29.38■■■□□ 2.29
PTPRA-207ENST00000431048 PPP2R1AP30153 589 aa29.37■■■□□ 2.29
PTPRA-207ENST00000431048 RBM17Q96I25 401 aaKnown RBP29.37■■■□□ 2.29
PTPRA-207ENST00000431048 CAPNS2Q96L46 248 aa29.37■■■□□ 2.29
PTPRA-207ENST00000431048 NGEFQ8N5V2 710 aa29.36■■■□□ 2.29
PTPRA-207ENST00000431048 VPS33BQ9H267 617 aa29.36■■■□□ 2.29
PTPRA-207ENST00000431048 LTBP1Q14766 1721 aa29.36■■■□□ 2.29
PTPRA-207ENST00000431048 CST9Q5W186 159 aa29.35■■■□□ 2.29
PTPRA-207ENST00000431048 KIF6Q6ZMV9 814 aa29.35■■■□□ 2.29
PTPRA-207ENST00000431048 TTLL7Q6ZT98 887 aa29.35■■■□□ 2.29
PTPRA-207ENST00000431048 SUSD4Q5VX71 490 aa29.34■■■□□ 2.29
PTPRA-207ENST00000431048 ZNF34Q8IZ26 560 aa29.34■■■□□ 2.29
PTPRA-207ENST00000431048 GPR101Q96P66 508 aaPredicted RBP29.34■■■□□ 2.29
PTPRA-207ENST00000431048 UBN2Q6ZU65 1347 aa29.34■■■□□ 2.29
PTPRA-207ENST00000431048 THSD7BQ9C0I4 1608 aa29.34■■■□□ 2.29
PTPRA-207ENST00000431048 LAMB4A4D0S4 1761 aa29.34■■■□□ 2.29
PTPRA-207ENST00000431048 FMR1Q06787 632 aaKnown RBP eCLIP29.33■■■□□ 2.292e-6■■■■□ 22.7
PTPRA-207ENST00000431048 BEGAINQ9BUH8 593 aa29.33■■■□□ 2.29
PTPRA-207ENST00000431048 RRP7AQ9Y3A4 280 aaKnown RBP29.33■■■□□ 2.29
PTPRA-207ENST00000431048 TLL2Q9Y6L7 1015 aa29.33■■■□□ 2.29
PTPRA-207ENST00000431048 NUP98P52948 1817 aa29.33■■■□□ 2.29
PTPRA-207ENST00000431048 PPEF1O14829 653 aaPredicted RBP29.32■■■□□ 2.28
PTPRA-207ENST00000431048 EIF4A1P60842 406 aaKnown RBP29.32■■■□□ 2.28
PTPRA-207ENST00000431048 NIM1KQ8IY84 436 aa29.32■■■□□ 2.28
PTPRA-207ENST00000431048 MAP2K2P36507 400 aa29.31■■■□□ 2.28
PTPRA-207ENST00000431048 CYP4F22Q6NT55 531 aa29.31■■■□□ 2.28
PTPRA-207ENST00000431048 SLC34A2O95436 690 aa29.3■■■□□ 2.28
PTPRA-207ENST00000431048 NTSR2O95665 410 aa29.3■■■□□ 2.28
PTPRA-207ENST00000431048 GPTP24298 496 aa29.3■■■□□ 2.28
PTPRA-207ENST00000431048 ADARB2Q9NS39 739 aaKnown RBP29.3■■■□□ 2.28
PTPRA-207ENST00000431048 GIGYF2Q6Y7W6 1299 aaKnown RBP29.29■■■□□ 2.28
PTPRA-207ENST00000431048 GPRC5DQ9NZD1 345 aa29.29■■■□□ 2.28
PTPRA-207ENST00000431048 TRAF5O00463 557 aa29.28■■■□□ 2.28
PTPRA-207ENST00000431048 RGS19P49795 217 aa29.28■■■□□ 2.28
PTPRA-207ENST00000431048 SLC10A5Q5PT55 438 aa29.28■■■□□ 2.28
PTPRA-207ENST00000431048 PAXIP1Q6ZW49 1069 aaPredicted RBP29.28■■■□□ 2.28
PTPRA-207ENST00000431048 PPP1R42Q7Z4L9 355 aa29.28■■■□□ 2.28
PTPRA-207ENST00000431048 ZBTB3Q9H5J0 574 aa29.28■■■□□ 2.28
PTPRA-207ENST00000431048 ATP6V0A2Q9Y487 856 aa29.28■■■□□ 2.28
PTPRA-207ENST00000431048 ERBB4Q15303 1308 aa29.27■■■□□ 2.28
PTPRA-207ENST00000431048 PPIP5K2O43314 1243 aa29.27■■■□□ 2.28
PTPRA-207ENST00000431048 MYL6BP14649 208 aa29.27■■■□□ 2.28
PTPRA-207ENST00000431048 FAM161AQ3B820 660 aa29.27■■■□□ 2.28
PTPRA-207ENST00000431048 PARP10Q53GL7 1025 aa29.27■■■□□ 2.28
PTPRA-207ENST00000431048 NLRP3Q96P20 1036 aa29.27■■■□□ 2.28
PTPRA-207ENST00000431048 TMX4Q9H1E5 349 aaPredicted RBP29.27■■■□□ 2.28
PTPRA-207ENST00000431048 TRPM7Q96QT4 1865 aa29.27■■■□□ 2.28
PTPRA-207ENST00000431048 NEFMP07197 916 aa29.26■■■□□ 2.27
PTPRA-207ENST00000431048 C3orf67Q6ZVT6 689 aa29.26■■■□□ 2.27
PTPRA-207ENST00000431048 HHIPL1Q96JK4 782 aa29.26■■■□□ 2.27
PTPRA-207ENST00000431048 RTFDC1Q9BY42 306 aaPredicted RBP29.26■■■□□ 2.27
PTPRA-207ENST00000431048 PGAP2Q9UHJ9 254 aa29.26■■■□□ 2.27
PTPRA-207ENST00000431048 ZNRF3Q9ULT6 936 aa29.26■■■□□ 2.27
PTPRA-207ENST00000431048 TCERG1O14776 1098 aaKnown RBP29.25■■■□□ 2.27
PTPRA-207ENST00000431048 SLC51AQ86UW1 340 aa29.25■■■□□ 2.27
PTPRA-207ENST00000431048 SUPT20HQ8NEM7 779 aa29.25■■■□□ 2.27
PTPRA-207ENST00000431048 KDM3BQ7LBC6 1761 aa29.25■■■□□ 2.27
PTPRA-207ENST00000431048 CXCL9Q07325 125 aa29.24■■■□□ 2.27
PTPRA-207ENST00000431048 AOC3Q16853 763 aa29.24■■■□□ 2.27
PTPRA-207ENST00000431048 SAPCD2Q86UD0 394 aa29.24■■■□□ 2.27
PTPRA-207ENST00000431048 CA12O43570 354 aa29.23■■■□□ 2.27
PTPRA-207ENST00000431048 GRM1Q13255 1194 aa29.22■■■□□ 2.27
PTPRA-207ENST00000431048 ZC3H15Q8WU90 426 aaKnown RBP29.22■■■□□ 2.27
PTPRA-207ENST00000431048 PLEKHF1Q96S99 279 aa29.22■■■□□ 2.27
PTPRA-207ENST00000431048 CCDC85CA6NKD9 419 aa29.21■■■□□ 2.27
PTPRA-207ENST00000431048 AOC2O75106 756 aa29.21■■■□□ 2.27
PTPRA-207ENST00000431048 BBOX1O75936 387 aa29.21■■■□□ 2.27
PTPRA-207ENST00000431048 UTP14AQ9BVJ6 771 aaKnown RBP29.21■■■□□ 2.27
PTPRA-207ENST00000431048 CDHR2Q9BYE9 1310 aa29.2■■■□□ 2.27
PTPRA-207ENST00000431048 CELF2O95319 508 aaKnown RBP29.2■■■□□ 2.26
PTPRA-207ENST00000431048 MLLT1Q03111 559 aaPredicted RBP29.2■■■□□ 2.26
PTPRA-207ENST00000431048 NFE2L2Q16236 605 aa29.2■■■□□ 2.26
PTPRA-207ENST00000431048 LRP10Q7Z4F1 713 aa29.2■■■□□ 2.26
PTPRA-207ENST00000431048 SP8Q8IXZ3 490 aa29.2■■■□□ 2.26
PTPRA-207ENST00000431048 GMPSP49915 693 aaPredicted RBP29.19■■■□□ 2.26
PTPRA-207ENST00000431048 ABCC4O15439 1325 aa29.19■■■□□ 2.26
PTPRA-207ENST00000431048 BRPF1P55201 1214 aaPredicted RBP29.17■■■□□ 2.26
PTPRA-207ENST00000431048 KIAA2012Q0VF49 1180 aa29.17■■■□□ 2.26
PTPRA-207ENST00000431048 CIAPIN1Q6FI81 312 aa29.17■■■□□ 2.26
PTPRA-207ENST00000431048 DLG5Q8TDM6 1919 aa29.16■■■□□ 2.26
PTPRA-207ENST00000431048 TNIP1Q15025 636 aa29.16■■■□□ 2.26
PTPRA-207ENST00000431048 PDIA6Q15084 440 aa29.16■■■□□ 2.26
PTPRA-207ENST00000431048 DPP8Q6V1X1 898 aaPredicted RBP29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms