RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 FANCIQ9NVI1 1328 aa12.64□□□□□ -0.39
HDAC6-207ENST00000430858 NFKBIEO00221 500 aa12.64□□□□□ -0.39
HDAC6-207ENST00000430858 LMNB1P20700 586 aa12.64□□□□□ -0.39
HDAC6-207ENST00000430858 RASSF7Q02833 373 aa12.64□□□□□ -0.39
HDAC6-207ENST00000430858 SLC10A5Q5PT55 438 aa12.64□□□□□ -0.39
HDAC6-207ENST00000430858 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
HDAC6-207ENST00000430858 NLRP3Q96P20 1036 aa12.64□□□□□ -0.39
HDAC6-207ENST00000430858 ISCA1Q9BUE6 129 aa12.64□□□□□ -0.39
HDAC6-207ENST00000430858 STK31Q9BXU1 1019 aa12.64□□□□□ -0.39
HDAC6-207ENST00000430858 PHAXQ9H814 394 aaKnown RBP12.64□□□□□ -0.39
HDAC6-207ENST00000430858 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-207ENST00000430858 DDX58O95786 925 aaKnown RBP12.63□□□□□ -0.39
HDAC6-207ENST00000430858 HOXA10P31260 410 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-207ENST00000430858 TRIM28Q13263 835 aaKnown RBP12.63□□□□□ -0.39
HDAC6-207ENST00000430858 ZNF526Q8TF50 670 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-207ENST00000430858 C7orf43Q8WVR3 580 aa12.63□□□□□ -0.39
HDAC6-207ENST00000430858 RPGRQ92834 1020 aaKnown RBP12.63□□□□□ -0.39
HDAC6-207ENST00000430858 MYH16Q9H6N6 1097 aa12.63□□□□□ -0.39
HDAC6-207ENST00000430858 TRMT112Q9UI30 125 aaKnown RBP12.63□□□□□ -0.39
HDAC6-207ENST00000430858 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
HDAC6-207ENST00000430858 LTBP3Q9NS15 1303 aa12.62□□□□□ -0.39
HDAC6-207ENST00000430858 ZC3H4Q9UPT8 1303 aaKnown RBP12.62□□□□□ -0.39
HDAC6-207ENST00000430858 CCDC93Q567U6 631 aa12.62□□□□□ -0.39
HDAC6-207ENST00000430858 RBM17Q96I25 401 aaKnown RBP12.62□□□□□ -0.39
HDAC6-207ENST00000430858 CRAMP1Q96RY5 1269 aa12.62□□□□□ -0.39
HDAC6-207ENST00000430858 TAOK3Q9H2K8 898 aa12.62□□□□□ -0.39
HDAC6-207ENST00000430858 ATP5J2-PTCD1G3V325 749 aa12.61□□□□□ -0.39
HDAC6-207ENST00000430858 VAMP4O75379 141 aa12.61□□□□□ -0.39
HDAC6-207ENST00000430858 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-207ENST00000430858 ZNF521Q96K83 1311 aa12.61□□□□□ -0.39
HDAC6-207ENST00000430858 TNRC6CQ9HCJ0 1690 aaKnown RBP12.61□□□□□ -0.39
HDAC6-207ENST00000430858 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
HDAC6-207ENST00000430858 PRELPP51888 382 aa12.6□□□□□ -0.39
HDAC6-207ENST00000430858 EXOSC9Q06265 439 aaKnown RBP12.6□□□□□ -0.39
HDAC6-207ENST00000430858 CC2D2BQ6DHV5 1058 aa12.6□□□□□ -0.39
HDAC6-207ENST00000430858 KSR2Q6VAB6 950 aa12.6□□□□□ -0.39
HDAC6-207ENST00000430858 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
HDAC6-207ENST00000430858 RTKN2Q8IZC4 609 aa12.6□□□□□ -0.39
HDAC6-207ENST00000430858 METTL22Q9BUU2 404 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-207ENST00000430858 SLX4Q8IY92 1834 aa12.6□□□□□ -0.39
HDAC6-207ENST00000430858 KDM2BQ8NHM5 1336 aa12.6□□□□□ -0.39
HDAC6-207ENST00000430858 ANKRD36CQ5JPF3 1778 aa12.59□□□□□ -0.39
HDAC6-207ENST00000430858 TCERG1O14776 1098 aaKnown RBP12.59□□□□□ -0.39
HDAC6-207ENST00000430858 HCLS1P14317 486 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-207ENST00000430858 C1QTNF8P60827 252 aa12.59□□□□□ -0.39
HDAC6-207ENST00000430858 FKBP4Q02790 459 aaKnown RBP eCLIP12.59□□□□□ -0.39
HDAC6-207ENST00000430858 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
HDAC6-207ENST00000430858 SYNE4Q8N205 404 aa12.59□□□□□ -0.39
HDAC6-207ENST00000430858 CCDC191Q8NCU4 936 aa12.59□□□□□ -0.39
HDAC6-207ENST00000430858 FAM89AQ96GI7 184 aa12.59□□□□□ -0.39
HDAC6-207ENST00000430858 MYD88Q99836 296 aa12.59□□□□□ -0.39
HDAC6-207ENST00000430858 ARFGEF2Q9Y6D5 1785 aa12.58□□□□□ -0.39
HDAC6-207ENST00000430858 PI4KAP2A4QPH2 592 aa12.58□□□□□ -0.4
HDAC6-207ENST00000430858 HSP90B1P14625 803 aaKnown RBP12.58□□□□□ -0.4
HDAC6-207ENST00000430858 DIEXFQ68CQ4 756 aaKnown RBP12.58□□□□□ -0.4
HDAC6-207ENST00000430858 PI4KAP1Q8N8J0 262 aa12.58□□□□□ -0.4
HDAC6-207ENST00000430858 ZBTB38Q8NAP3 1195 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-207ENST00000430858 TMX4Q9H1E5 349 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-207ENST00000430858 MAP3K2Q9Y2U5 619 aa12.58□□□□□ -0.4
HDAC6-207ENST00000430858 E9PSI1 815 aa12.57□□□□□ -0.4
HDAC6-207ENST00000430858 KIF3CO14782 793 aa12.57□□□□□ -0.4
HDAC6-207ENST00000430858 PPEF1O14829 653 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-207ENST00000430858 BBOX1O75936 387 aa12.57□□□□□ -0.4
HDAC6-207ENST00000430858 NEXNQ0ZGT2 675 aa12.57□□□□□ -0.4
HDAC6-207ENST00000430858 FLIIQ13045 1269 aa12.57□□□□□ -0.4
HDAC6-207ENST00000430858 OLFM4Q6UX06 510 aa12.57□□□□□ -0.4
HDAC6-207ENST00000430858 DDX46Q7L014 1031 aaKnown RBP12.57□□□□□ -0.4
HDAC6-207ENST00000430858 CWC25Q9NXE8 425 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-207ENST00000430858 SBF1O95248 1867 aa12.57□□□□□ -0.4
HDAC6-207ENST00000430858 GLTPD2A6NH11 291 aa12.56□□□□□ -0.4
HDAC6-207ENST00000430858 IRS4O14654 1257 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-207ENST00000430858 PCCAP05165 728 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-207ENST00000430858 GRAPQ13588 217 aa12.56□□□□□ -0.4
HDAC6-207ENST00000430858 SF3B3Q15393 1217 aaKnown RBP12.56□□□□□ -0.4
HDAC6-207ENST00000430858 DPY19L2Q6NUT2 758 aa12.56□□□□□ -0.4
HDAC6-207ENST00000430858 G2E3Q7L622 706 aa12.56□□□□□ -0.4
HDAC6-207ENST00000430858 GRAPLQ8TC17 118 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-207ENST00000430858 ZNF428Q96B54 188 aa12.56□□□□□ -0.4
HDAC6-207ENST00000430858 PSMD1Q99460 953 aa12.56□□□□□ -0.4
HDAC6-207ENST00000430858 NMRK2Q9NPI5 230 aa12.56□□□□□ -0.4
HDAC6-207ENST00000430858 FER1L6Q2WGJ9 1857 aa12.56□□□□□ -0.4
HDAC6-207ENST00000430858 ABCC4O15439 1325 aa12.56□□□□□ -0.4
HDAC6-207ENST00000430858 SNED1Q8TER0 1413 aa12.55□□□□□ -0.4
HDAC6-207ENST00000430858 FKBP5Q13451 457 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-207ENST00000430858 RTL5Q5HYW3 569 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-207ENST00000430858 ZNF277Q9NRM2 450 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-207ENST00000430858 ATP6V0A2Q9Y487 856 aa12.55□□□□□ -0.4
HDAC6-207ENST00000430858 IGKV5-2P06315 115 aa12.54□□□□□ -0.4
HDAC6-207ENST00000430858 IARSP41252 1262 aaKnown RBP12.54□□□□□ -0.4
HDAC6-207ENST00000430858 TMC4Q7Z404 712 aa12.54□□□□□ -0.4
HDAC6-207ENST00000430858 SP8Q8IXZ3 490 aa12.54□□□□□ -0.4
HDAC6-207ENST00000430858 DNAAF4Q8WXU2 420 aa12.54□□□□□ -0.4
HDAC6-207ENST00000430858 CACNA1SQ13698 1873 aa12.54□□□□□ -0.4
HDAC6-207ENST00000430858 NEURL1BA8MQ27 555 aa12.53□□□□□ -0.4
HDAC6-207ENST00000430858 PDE8AO60658 829 aa12.53□□□□□ -0.4
HDAC6-207ENST00000430858 TOMM70O94826 608 aa12.53□□□□□ -0.4
HDAC6-207ENST00000430858 SLFN5Q08AF3 891 aa12.53□□□□□ -0.4
HDAC6-207ENST00000430858 MIER1Q8N108 512 aa12.53□□□□□ -0.4
HDAC6-207ENST00000430858 RRAGCQ9HB90 399 aa12.53□□□□□ -0.4
HDAC6-207ENST00000430858 CDHR2Q9BYE9 1310 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms