RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 SDSP20132 328 aa13.54□□□□□ -0.24
PTCH1-208ENST00000430669 CCDC183Q5T5S1 534 aa13.54□□□□□ -0.24
PTCH1-208ENST00000430669 PRPF40BQ6NWY9 871 aaKnown RBP13.54□□□□□ -0.24
PTCH1-208ENST00000430669 MAGEC2Q9UBF1 373 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-208ENST00000430669 IKQ13123 557 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-208ENST00000430669 IQCA1Q86XH1 822 aa13.53□□□□□ -0.24
PTCH1-208ENST00000430669 XAGE3Q8WTP9 111 aa13.53□□□□□ -0.24
PTCH1-208ENST00000430669 NUP62CLQ9H1M0 184 aa13.53□□□□□ -0.24
PTCH1-208ENST00000430669 VWDEQ8N2E2 1590 aa13.53□□□□□ -0.24
PTCH1-208ENST00000430669 A0A0U1RQG5 324 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-208ENST00000430669 ADAMTS2O95450 1211 aa13.53□□□□□ -0.24
PTCH1-208ENST00000430669 SOGA3Q5TF21 947 aa13.52□□□□□ -0.24
PTCH1-208ENST00000430669 METP08581 1390 aa13.52□□□□□ -0.25
PTCH1-208ENST00000430669 KDM2BQ8NHM5 1336 aa13.52□□□□□ -0.25
PTCH1-208ENST00000430669 SMTNL1A8MU46 457 aa13.52□□□□□ -0.25
PTCH1-208ENST00000430669 CAVIN2O95810 425 aa13.52□□□□□ -0.25
PTCH1-208ENST00000430669 DZIP1Q86YF9 867 aaKnown RBP13.52□□□□□ -0.25
PTCH1-208ENST00000430669 RAD50Q92878 1312 aa13.51□□□□□ -0.25
PTCH1-208ENST00000430669 MAP3K11Q16584 847 aa13.51□□□□□ -0.25
PTCH1-208ENST00000430669 NFATC2IPQ8NCF5 419 aa13.51□□□□□ -0.25
PTCH1-208ENST00000430669 BRPF1P55201 1214 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-208ENST00000430669 ESYT1Q9BSJ8 1104 aa13.51□□□□□ -0.25
PTCH1-208ENST00000430669 DDX21Q9NR30 783 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTCH1-208ENST00000430669 NCAPD2Q15021 1401 aa13.51□□□□□ -0.25
PTCH1-208ENST00000430669 ST5P78524 1137 aa13.51□□□□□ -0.25
PTCH1-208ENST00000430669 ZSCAN16Q9H4T2 348 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-208ENST00000430669 GSTO1P78417 241 aa13.51□□□□□ -0.25
PTCH1-208ENST00000430669 SEC63Q9UGP8 760 aaKnown RBP13.51□□□□□ -0.25
PTCH1-208ENST00000430669 CCDC8Q9H0W5 538 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-208ENST00000430669 ZBTB7BO15156 539 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-208ENST00000430669 CHRNA2Q15822 529 aa13.51□□□□□ -0.25
PTCH1-208ENST00000430669 LDHAL6AQ6ZMR3 332 aa13.51□□□□□ -0.25
PTCH1-208ENST00000430669 PPP4R3BQ5MIZ7 849 aa13.5□□□□□ -0.25
PTCH1-208ENST00000430669 PYM1Q9BRP8 204 aaKnown RBP13.5□□□□□ -0.25
PTCH1-208ENST00000430669 C8orf34Q49A92 452 aa13.5□□□□□ -0.25
PTCH1-208ENST00000430669 ZNF790Q6PG37 636 aa13.5□□□□□ -0.25
PTCH1-208ENST00000430669 COPS6Q7L5N1 327 aa13.5□□□□□ -0.25
PTCH1-208ENST00000430669 CNNM2Q9H8M5 875 aa13.5□□□□□ -0.25
PTCH1-208ENST00000430669 NRXN1Q9ULB1 1477 aa13.5□□□□□ -0.25
PTCH1-208ENST00000430669 CCAR1Q8IX12 1150 aaKnown RBP13.5□□□□□ -0.25
PTCH1-208ENST00000430669 SMC2O95347 1197 aa13.5□□□□□ -0.25
PTCH1-208ENST00000430669 CCDC178Q5BJE1 867 aa13.5□□□□□ -0.25
PTCH1-208ENST00000430669 DDX46Q7L014 1031 aaKnown RBP13.5□□□□□ -0.25
PTCH1-208ENST00000430669 ABCF2Q9UG63 623 aa13.5□□□□□ -0.25
PTCH1-208ENST00000430669 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
PTCH1-208ENST00000430669 SLC12A7Q9Y666 1083 aa13.5□□□□□ -0.25
PTCH1-208ENST00000430669 LTKP29376 864 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 NUP133Q8WUM0 1156 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 LMTK3Q96Q04 1460 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 BAG3O95817 575 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 GNAT2P19087 354 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 MCMDC2Q4G0Z9 681 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 CATIPQ7Z7H3 387 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 C8orf76Q96K31 380 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 ARGLU1Q9NWB6 273 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-208ENST00000430669 RLBP1P12271 317 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 DDB1Q16531 1140 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 CEP57L1Q8IYX8 460 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 PLEKHF1Q96S99 279 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 SLC52A2Q9HAB3 445 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 ZBTB3Q9H5J0 574 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 TRMT2AQ8IZ69 625 aaKnown RBP13.49□□□□□ -0.25
PTCH1-208ENST00000430669 AK7Q96M32 723 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 MYOM1P52179 1685 aa13.49□□□□□ -0.25
PTCH1-208ENST00000430669 USP5P45974 858 aa13.48□□□□□ -0.25
PTCH1-208ENST00000430669 LUC7LQ9NQ29 371 aaKnown RBP13.48□□□□□ -0.25
PTCH1-208ENST00000430669 GOLIM4O00461 696 aa13.48□□□□□ -0.25
PTCH1-208ENST00000430669 MCM5P33992 734 aa13.48□□□□□ -0.25
PTCH1-208ENST00000430669 TMTC2Q8N394 836 aa13.48□□□□□ -0.25
PTCH1-208ENST00000430669 EPB41L2O43491 1005 aaKnown RBP13.48□□□□□ -0.25
PTCH1-208ENST00000430669 NCOA7Q8NI08 942 aa13.48□□□□□ -0.25
PTCH1-208ENST00000430669 KRT23Q9C075 422 aa13.48□□□□□ -0.25
PTCH1-208ENST00000430669 KIF5BP33176 963 aa13.48□□□□□ -0.25
PTCH1-208ENST00000430669 CCDC83Q8IWF9 413 aa13.48□□□□□ -0.25
PTCH1-208ENST00000430669 PHF23Q9BUL5 403 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-208ENST00000430669 ABCC4O15439 1325 aa13.48□□□□□ -0.25
PTCH1-208ENST00000430669 ATP6V1AP38606 617 aa13.48□□□□□ -0.25
PTCH1-208ENST00000430669 NEK1Q96PY6 1258 aa13.48□□□□□ -0.25
PTCH1-208ENST00000430669 PDE4BQ07343 736 aa13.48□□□□□ -0.25
PTCH1-208ENST00000430669 SSRP1Q08945 709 aaKnown RBP13.48□□□□□ -0.25
PTCH1-208ENST00000430669 PLEKHM2Q8IWE5 1019 aa13.48□□□□□ -0.25
PTCH1-208ENST00000430669 MAP7D2Q96T17 732 aa13.48□□□□□ -0.25
PTCH1-208ENST00000430669 RFC4P35249 363 aa13.47□□□□□ -0.25
PTCH1-208ENST00000430669 KRI1Q8N9T8 703 aaKnown RBP13.47□□□□□ -0.25
PTCH1-208ENST00000430669 PLBD2Q8NHP8 589 aa13.47□□□□□ -0.25
PTCH1-208ENST00000430669 TMOD2Q9NZR1 351 aa13.47□□□□□ -0.25
PTCH1-208ENST00000430669 PTCH1Q13635 1447 aa13.47□□□□□ -0.25
PTCH1-208ENST00000430669 METTL22Q9BUU2 404 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-208ENST00000430669 TSPYL6Q8N831 410 aa13.47□□□□□ -0.25
PTCH1-208ENST00000430669 DLG5Q8TDM6 1919 aa13.47□□□□□ -0.25
PTCH1-208ENST00000430669 ROBO2Q9HCK4 1378 aa13.47□□□□□ -0.25
PTCH1-208ENST00000430669 ERVV-2B6SEH9 535 aa13.47□□□□□ -0.25
PTCH1-208ENST00000430669 STX6O43752 255 aa13.47□□□□□ -0.25
PTCH1-208ENST00000430669 CEBPZQ03701 1054 aaKnown RBP13.47□□□□□ -0.25
PTCH1-208ENST00000430669 CTCFLQ8NI51 663 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-208ENST00000430669 LDHCP07864 332 aa13.47□□□□□ -0.25
PTCH1-208ENST00000430669 CCDC12Q8WUD4 166 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-208ENST00000430669 LRRC7Q96NW7 1537 aa13.47□□□□□ -0.25
PTCH1-208ENST00000430669 UBE2HP62256 183 aa13.47□□□□□ -0.25
PTCH1-208ENST00000430669 SPATA31D1Q6ZQQ2 1576 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms