RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	EAPP	Q56P03	285 aa	Predicted RBP	23.23	■■□□□ 1.31
MRPL28-203	ENST00000429738	OLFM4	Q6UX06	510 aa		23.23	■■□□□ 1.31
MRPL28-203	ENST00000429738	PRDM10	Q9NQV6	1147 aa		23.23	■■□□□ 1.31
MRPL28-203	ENST00000429738	ZNF541	Q9H0D2	1346 aa		23.23	■■□□□ 1.31
MRPL28-203	ENST00000429738	FAM177B	A6PVY3	158 aa		23.22	■■□□□ 1.31
MRPL28-203	ENST00000429738	VEGFB	P49765	207 aa		23.22	■■□□□ 1.31
MRPL28-203	ENST00000429738	KIF6	Q6ZMV9	814 aa		23.22	■■□□□ 1.31
MRPL28-203	ENST00000429738	CLEC11A	Q9Y240	323 aa		23.22	■■□□□ 1.31
MRPL28-203	ENST00000429738	EPHX2	P34913	555 aa		23.21	■■□□□ 1.31
MRPL28-203	ENST00000429738	ZEB1	P37275	1124 aa	Predicted RBP	23.21	■■□□□ 1.31
MRPL28-203	ENST00000429738	SYNE4	Q8N205	404 aa		23.21	■■□□□ 1.31
MRPL28-203	ENST00000429738	IBTK	Q9P2D0	1353 aa	Predicted RBP	23.2	■■□□□ 1.3
MRPL28-203	ENST00000429738	UBN2	Q6ZU65	1347 aa		23.2	■■□□□ 1.3
MRPL28-203	ENST00000429738	FZD9	O00144	591 aa		23.2	■■□□□ 1.3
MRPL28-203	ENST00000429738	EIF2S2	P20042	333 aa	Known RBP	23.2	■■□□□ 1.3
MRPL28-203	ENST00000429738	GTF2E1	P29083	439 aa	Predicted RBP	23.2	■■□□□ 1.3
MRPL28-203	ENST00000429738	IARS	P41252	1262 aa	Known RBP	23.2	■■□□□ 1.3
MRPL28-203	ENST00000429738	PNMA8A	Q86V59	439 aa	Predicted RBP	23.2	■■□□□ 1.3
MRPL28-203	ENST00000429738	AIDA	Q96BJ3	306 aa		23.2	■■□□□ 1.3
MRPL28-203	ENST00000429738	CTCF	P49711	727 aa	Predicted RBP	23.19	■■□□□ 1.3
MRPL28-203	ENST00000429738	GIGYF2	Q6Y7W6	1299 aa	Known RBP	23.19	■■□□□ 1.3
MRPL28-203	ENST00000429738	NYX	Q9GZU5	481 aa		23.19	■■□□□ 1.3
MRPL28-203	ENST00000429738	ZBTB3	Q9H5J0	574 aa		23.19	■■□□□ 1.3
MRPL28-203	ENST00000429738	RIC1	Q4ADV7	1423 aa		23.18	■■□□□ 1.3
MRPL28-203	ENST00000429738	ABCC12	Q96J65	1359 aa		23.18	■■□□□ 1.3
MRPL28-203	ENST00000429738	PROSER3	Q2NL68	480 aa		23.18	■■□□□ 1.3
MRPL28-203	ENST00000429738	ZNF34	Q8IZ26	560 aa		23.18	■■□□□ 1.3
MRPL28-203	ENST00000429738	CNTROB	Q8N137	903 aa		23.18	■■□□□ 1.3
MRPL28-203	ENST00000429738	GPC2	Q8N158	579 aa		23.17	■■□□□ 1.3
MRPL28-203	ENST00000429738	WBP1L	Q9NX94	342 aa		23.17	■■□□□ 1.3
MRPL28-203	ENST00000429738	RNF123	Q5XPI4	1314 aa		23.16	■■□□□ 1.3
MRPL28-203	ENST00000429738	KRT24	Q2M2I5	525 aa		23.16	■■□□□ 1.3
MRPL28-203	ENST00000429738	CRY2	Q49AN0	593 aa		23.16	■■□□□ 1.3
MRPL28-203	ENST00000429738	JDP2	Q8WYK2	163 aa		23.16	■■□□□ 1.3
MRPL28-203	ENST00000429738	PSMD1	Q99460	953 aa		23.16	■■□□□ 1.3
MRPL28-203	ENST00000429738	ANKRD36C	Q5JPF3	1778 aa		23.15	■■□□□ 1.3
MRPL28-203	ENST00000429738	ANXA1	P04083	346 aa		23.15	■■□□□ 1.3
MRPL28-203	ENST00000429738	GPT	P24298	496 aa		23.15	■■□□□ 1.3
MRPL28-203	ENST00000429738	DEFB115	Q30KQ5	88 aa		23.15	■■□□□ 1.3
MRPL28-203	ENST00000429738	SUSD4	Q5VX71	490 aa		23.15	■■□□□ 1.3
MRPL28-203	ENST00000429738	MAP1S	Q66K74	1059 aa	Predicted RBP	23.15	■■□□□ 1.3
MRPL28-203	ENST00000429738	CC2D2B	Q6DHV5	1058 aa		23.15	■■□□□ 1.3
MRPL28-203	ENST00000429738	NUTM1	Q86Y26	1132 aa		23.15	■■□□□ 1.3
MRPL28-203	ENST00000429738	CFAP44	Q96MT7	982 aa		23.15	■■□□□ 1.3
MRPL28-203	ENST00000429738	RASSF10	A6NK89	507 aa		23.14	■■□□□ 1.29
MRPL28-203	ENST00000429738	NTSR2	O95665	410 aa		23.14	■■□□□ 1.29
MRPL28-203	ENST00000429738	ADAMTSL1	Q8N6G6	1762 aa		23.14	■■□□□ 1.29
MRPL28-203	ENST00000429738	HOXB7	P09629	217 aa		23.13	■■□□□ 1.29
MRPL28-203	ENST00000429738	DDX21	Q9NR30	783 aa	Known RBP eCLIP	23.13	■■□□□ 1.29
MRPL28-203	ENST00000429738	LAS1L	Q9Y4W2	734 aa	Known RBP	23.13	■■□□□ 1.29
MRPL28-203	ENST00000429738	APAF1	O14727	1248 aa		23.12	■■□□□ 1.29
MRPL28-203	ENST00000429738	ZNF853	P0CG23	659 aa		23.12	■■□□□ 1.29
MRPL28-203	ENST00000429738	EIF6	P56537	245 aa	Known RBP	23.12	■■□□□ 1.29
MRPL28-203	ENST00000429738	PARP10	Q53GL7	1025 aa		23.12	■■□□□ 1.29
MRPL28-203	ENST00000429738	SNED1	Q8TER0	1413 aa		23.12	■■□□□ 1.29
MRPL28-203	ENST00000429738	NECTIN2	Q92692	538 aa		23.12	■■□□□ 1.29
MRPL28-203	ENST00000429738	HOXA10	P31260	410 aa	Predicted RBP	23.11	■■□□□ 1.29
MRPL28-203	ENST00000429738	LBX1	P52954	281 aa		23.11	■■□□□ 1.29
MRPL28-203	ENST00000429738	GRIPAP1	Q4V328	841 aa		23.11	■■□□□ 1.29
MRPL28-203	ENST00000429738	COPS6	Q7L5N1	327 aa		23.11	■■□□□ 1.29
MRPL28-203	ENST00000429738	PPP1R42	Q7Z4L9	355 aa		23.1	■■□□□ 1.29
MRPL28-203	ENST00000429738	XAGE3	Q8WTP9	111 aa		23.1	■■□□□ 1.29
MRPL28-203	ENST00000429738	MBIP	Q9NS73	344 aa		23.1	■■□□□ 1.29
MRPL28-203	ENST00000429738	GJA3	Q9Y6H8	435 aa		23.1	■■□□□ 1.29
MRPL28-203	ENST00000429738	CCDC184	Q52MB2	194 aa		23.09	■■□□□ 1.29
MRPL28-203	ENST00000429738	RPGR	Q92834	1020 aa	Known RBP	23.09	■■□□□ 1.29
MRPL28-203	ENST00000429738	ABT1	Q9ULW3	272 aa	Known RBP	23.09	■■□□□ 1.29
MRPL28-203	ENST00000429738	WDR33	Q9C0J8	1336 aa	Known RBP	23.08	■■□□□ 1.29
MRPL28-203	ENST00000429738	LMOD1	P29536	600 aa	Predicted RBP	23.08	■■□□□ 1.29
MRPL28-203	ENST00000429738	MAP2K1	Q02750	393 aa	Predicted RBP	23.08	■■□□□ 1.29
MRPL28-203	ENST00000429738	HDGFL1	Q5TGJ6	251 aa		23.08	■■□□□ 1.29
MRPL28-203	ENST00000429738	CHPF2	Q9P2E5	772 aa		23.08	■■□□□ 1.29
MRPL28-203	ENST00000429738	AIMP1	Q12904	312 aa	Known RBP	23.07	■■□□□ 1.28
MRPL28-203	ENST00000429738	HSP90AB3P	Q58FF7	597 aa		23.07	■■□□□ 1.28
MRPL28-203	ENST00000429738	LARGE2	Q8N3Y3	721 aa		23.07	■■□□□ 1.28
MRPL28-203	ENST00000429738	CRAMP1	Q96RY5	1269 aa		23.07	■■□□□ 1.28
MRPL28-203	ENST00000429738	IFT57	Q9NWB7	429 aa		23.07	■■□□□ 1.28
MRPL28-203	ENST00000429738	HSPA8	P11142	646 aa	Known RBP	23.06	■■□□□ 1.28
MRPL28-203	ENST00000429738	SLC10A5	Q5PT55	438 aa		23.06	■■□□□ 1.28
MRPL28-203	ENST00000429738	RBM17	Q96I25	401 aa	Known RBP	23.06	■■□□□ 1.28
MRPL28-203	ENST00000429738	UTP14A	Q9BVJ6	771 aa	Known RBP	23.06	■■□□□ 1.28
MRPL28-203	ENST00000429738	EPS15	P42566	896 aa		23.05	■■□□□ 1.28
MRPL28-203	ENST00000429738	CALD1	Q05682	793 aa	Known RBP	23.05	■■□□□ 1.28
MRPL28-203	ENST00000429738	TCIRG1	Q13488	830 aa		23.05	■■□□□ 1.28
MRPL28-203	ENST00000429738	DUSP27	Q5VZP5	1158 aa		23.05	■■□□□ 1.28
MRPL28-203	ENST00000429738	C3orf67	Q6ZVT6	689 aa		23.05	■■□□□ 1.28
MRPL28-203	ENST00000429738	DBF4	Q9UBU7	674 aa	Predicted RBP	23.05	■■□□□ 1.28
MRPL28-203	ENST00000429738	LAMB2	P55268	1798 aa		23.04	■■□□□ 1.28
MRPL28-203	ENST00000429738	COL4A5	P29400	1685 aa		23.04	■■□□□ 1.28
MRPL28-203	ENST00000429738	ZNF316	A6NFI3	1004 aa	Predicted RBP	23.04	■■□□□ 1.28
MRPL28-203	ENST00000429738	SCNN1D	P51172	638 aa		23.04	■■□□□ 1.28
MRPL28-203	ENST00000429738	GNAI1	P63096	354 aa		23.04	■■□□□ 1.28
MRPL28-203	ENST00000429738	NLRP10	Q86W26	655 aa		23.04	■■□□□ 1.28
MRPL28-203	ENST00000429738	USP50	Q70EL3	339 aa	Predicted RBP	23.03	■■□□□ 1.28
MRPL28-203	ENST00000429738	NLRP3	Q96P20	1036 aa		23.03	■■□□□ 1.28
MRPL28-203	ENST00000429738	PPEF1	O14829	653 aa	Predicted RBP	23.02	■■□□□ 1.28
MRPL28-203	ENST00000429738	PLBD2	Q8NHP8	589 aa		23.02	■■□□□ 1.28
MRPL28-203	ENST00000429738	LTBP1	Q14766	1721 aa		23.02	■■□□□ 1.28
MRPL28-203	ENST00000429738	TCERG1	O14776	1098 aa	Known RBP	23.01	■■□□□ 1.27
MRPL28-203	ENST00000429738	ECE1	P42892	770 aa		23.01	■■□□□ 1.27

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms