RNA–Protein interactions for RNA: ENST00000429586.6

ABCF3-203, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCF3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-203ENST00000429586 ONECUT3O60422 494 aaPredicted RBP20.86■□□□□ 0.93
ABCF3-203ENST00000429586 CRKLP46109 303 aaKnown RBP20.86■□□□□ 0.93
ABCF3-203ENST00000429586 EPHA10Q5JZY3 1008 aa20.86■□□□□ 0.93
ABCF3-203ENST00000429586 KIF6Q6ZMV9 814 aa20.86■□□□□ 0.93
ABCF3-203ENST00000429586 TBC1D2BQ9UPU7 963 aa20.85■□□□□ 0.93
ABCF3-203ENST00000429586 NHSQ6T4R5 1651 aa20.85■□□□□ 0.93
ABCF3-203ENST00000429586 POLA2Q14181 598 aa20.85■□□□□ 0.93
ABCF3-203ENST00000429586 INTS5Q6P9B9 1019 aaKnown RBP20.85■□□□□ 0.93
ABCF3-203ENST00000429586 MCM4P33991 863 aa20.84■□□□□ 0.93
ABCF3-203ENST00000429586 RBM10P98175 930 aaKnown RBP20.84■□□□□ 0.93
ABCF3-203ENST00000429586 HLFQ16534 295 aa20.84■□□□□ 0.93
ABCF3-203ENST00000429586 SMARCC1Q92922 1105 aaPredicted RBP20.84■□□□□ 0.93
ABCF3-203ENST00000429586 SURF6O75683 361 aaKnown RBP20.84■□□□□ 0.93
ABCF3-203ENST00000429586 CCDC87Q9NVE4 849 aa20.84■□□□□ 0.93
ABCF3-203ENST00000429586 PA2G4Q9UQ80 394 aaKnown RBP20.83■□□□□ 0.92
ABCF3-203ENST00000429586 CWC25Q9NXE8 425 aaPredicted RBP20.82■□□□□ 0.92
ABCF3-203ENST00000429586 ISY1Q9ULR0 285 aaKnown RBP20.82■□□□□ 0.92
ABCF3-203ENST00000429586 MAP3K15Q6ZN16 1313 aa20.82■□□□□ 0.92
ABCF3-203ENST00000429586 NUP98P52948 1817 aa20.82■□□□□ 0.92
ABCF3-203ENST00000429586 IBTKQ9P2D0 1353 aaPredicted RBP20.82■□□□□ 0.92
ABCF3-203ENST00000429586 COL5A3P25940 1745 aaPredicted RBP20.82■□□□□ 0.92
ABCF3-203ENST00000429586 GPTP24298 496 aa20.82■□□□□ 0.92
ABCF3-203ENST00000429586 DZIP3Q86Y13 1208 aaKnown RBP20.81■□□□□ 0.92
ABCF3-203ENST00000429586 IL6STP40189 918 aaPredicted RBP20.81■□□□□ 0.92
ABCF3-203ENST00000429586 TCIRG1Q13488 830 aa20.81■□□□□ 0.92
ABCF3-203ENST00000429586 PLEKHM2Q8IWE5 1019 aa20.81■□□□□ 0.92
ABCF3-203ENST00000429586 LINC00116Q8NCU8 138 aa20.81■□□□□ 0.92
ABCF3-203ENST00000429586 LRRCC1Q9C099 1032 aa20.81■□□□□ 0.92
ABCF3-203ENST00000429586 IL1RAPL2Q9NP60 686 aa20.81■□□□□ 0.92
ABCF3-203ENST00000429586 MTX1Q13505 466 aa20.8■□□□□ 0.92
ABCF3-203ENST00000429586 SMIM5Q71RC9 77 aa20.8■□□□□ 0.92
ABCF3-203ENST00000429586 KLHDC4Q8TBB5 520 aa20.8■□□□□ 0.92
ABCF3-203ENST00000429586 SEC24BO95487 1268 aa20.8■□□□□ 0.92
ABCF3-203ENST00000429586 GZF1Q9H116 711 aaPredicted RBP20.8■□□□□ 0.92
ABCF3-203ENST00000429586 CASP7P55210 303 aa20.79■□□□□ 0.92
ABCF3-203ENST00000429586 GRPEL1Q9HAV7 217 aa20.79■□□□□ 0.92
ABCF3-203ENST00000429586 EIF5P55010 431 aaKnown RBP20.79■□□□□ 0.92
ABCF3-203ENST00000429586 ISCA1Q9BUE6 129 aa20.79■□□□□ 0.92
ABCF3-203ENST00000429586 HDAC5Q9UQL6 1122 aa20.79■□□□□ 0.92
ABCF3-203ENST00000429586 CICQ96RK0 1608 aaPredicted RBP20.79■□□□□ 0.92
ABCF3-203ENST00000429586 TSHZ3Q63HK5 1081 aa20.78■□□□□ 0.92
ABCF3-203ENST00000429586 GIGYF2Q6Y7W6 1299 aaKnown RBP20.78■□□□□ 0.92
ABCF3-203ENST00000429586 CCDC191Q8NCU4 936 aa20.78■□□□□ 0.92
ABCF3-203ENST00000429586 RREB1Q92766 1687 aa20.78■□□□□ 0.92
ABCF3-203ENST00000429586 ANKRD36CQ5JPF3 1778 aa20.78■□□□□ 0.92
ABCF3-203ENST00000429586 H7C1W4 665 aa20.77■□□□□ 0.92
ABCF3-203ENST00000429586 TRAK2O60296 914 aa20.77■□□□□ 0.92
ABCF3-203ENST00000429586 OS9Q13438 667 aaPredicted RBP20.77■□□□□ 0.92
ABCF3-203ENST00000429586 SIL1Q9H173 461 aa20.77■□□□□ 0.92
ABCF3-203ENST00000429586 KRT27Q7Z3Y8 459 aa20.76■□□□□ 0.91
ABCF3-203ENST00000429586 SYNE4Q8N205 404 aa20.76■□□□□ 0.91
ABCF3-203ENST00000429586 FAM89AQ96GI7 184 aa20.75■□□□□ 0.91
ABCF3-203ENST00000429586 TBC1D2Q9BYX2 928 aa20.75■□□□□ 0.91
ABCF3-203ENST00000429586 CHMP3Q9Y3E7 222 aa20.75■□□□□ 0.91
ABCF3-203ENST00000429586 GSPT1P15170 499 aaKnown RBP20.75■□□□□ 0.91
ABCF3-203ENST00000429586 RHPN1Q8TCX5 695 aa20.75■□□□□ 0.91
ABCF3-203ENST00000429586 ZNF831Q5JPB2 1677 aa20.75■□□□□ 0.91
ABCF3-203ENST00000429586 LMBR1LQ6UX01 489 aa20.74■□□□□ 0.91
ABCF3-203ENST00000429586 TRIM44Q96DX7 344 aaPredicted RBP20.74■□□□□ 0.91
ABCF3-203ENST00000429586 CCNL1Q9UK58 526 aaPredicted RBP20.74■□□□□ 0.91
ABCF3-203ENST00000429586 NUTM1Q86Y26 1132 aa20.74■□□□□ 0.91
ABCF3-203ENST00000429586 FOXO4P98177 505 aa20.74■□□□□ 0.91
ABCF3-203ENST00000429586 ZNF772Q68DY9 489 aaPredicted RBP20.74■□□□□ 0.91
ABCF3-203ENST00000429586 LY75O60449 1722 aa20.73■□□□□ 0.91
ABCF3-203ENST00000429586 COL15A1P39059 1388 aa20.73■□□□□ 0.91
ABCF3-203ENST00000429586 BMP2KLQ5H9B9 411 aa20.73■□□□□ 0.91
ABCF3-203ENST00000429586 RBM6P78332 1123 aaKnown RBP20.73■□□□□ 0.91
ABCF3-203ENST00000429586 KIAA1211Q6ZU35 1233 aa20.73■□□□□ 0.91
ABCF3-203ENST00000429586 NLRP10Q86W26 655 aa20.73■□□□□ 0.91
ABCF3-203ENST00000429586 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.73■□□□□ 0.91
ABCF3-203ENST00000429586 FAM177BA6PVY3 158 aa20.72■□□□□ 0.91
ABCF3-203ENST00000429586 RAB11FIP3O75154 756 aa20.72■□□□□ 0.91
ABCF3-203ENST00000429586 TRIM37O94972 964 aa20.72■□□□□ 0.91
ABCF3-203ENST00000429586 RABL6Q3YEC7 729 aaPredicted RBP20.72■□□□□ 0.91
ABCF3-203ENST00000429586 CCDC85AQ96PX6 553 aaPredicted RBP20.72■□□□□ 0.91
ABCF3-203ENST00000429586 TAF1LQ8IZX4 1826 aa20.72■□□□□ 0.91
ABCF3-203ENST00000429586 UBN2Q6ZU65 1347 aa20.72■□□□□ 0.91
ABCF3-203ENST00000429586 TTC22Q5TAA0 569 aa20.72■□□□□ 0.91
ABCF3-203ENST00000429586 KIF1BPQ96EK5 621 aa20.72■□□□□ 0.91
ABCF3-203ENST00000429586 TBC1D32Q96NH3 1257 aa20.72■□□□□ 0.91
ABCF3-203ENST00000429586 PDE1AP54750 535 aa20.71■□□□□ 0.91
ABCF3-203ENST00000429586 TRIM28Q13263 835 aaKnown RBP20.71■□□□□ 0.91
ABCF3-203ENST00000429586 ERVV-1B6SEH8 477 aa20.71■□□□□ 0.91
ABCF3-203ENST00000429586 CAMTA2O94983 1202 aa20.71■□□□□ 0.91
ABCF3-203ENST00000429586 MAP7D2Q96T17 732 aa20.71■□□□□ 0.91
ABCF3-203ENST00000429586 TERF1P54274 439 aa20.7■□□□□ 0.9
ABCF3-203ENST00000429586 HSP90AB3PQ58FF7 597 aa20.7■□□□□ 0.9
ABCF3-203ENST00000429586 SALL3Q9BXA9 1300 aa20.7■□□□□ 0.9
ABCF3-203ENST00000429586 MX1P20591 662 aa20.7■□□□□ 0.9
ABCF3-203ENST00000429586 RFX5P48382 616 aaPredicted RBP20.7■□□□□ 0.9
ABCF3-203ENST00000429586 HSP90AB4PQ58FF6 505 aa20.7■□□□□ 0.9
ABCF3-203ENST00000429586 CHMP5Q9NZZ3 219 aa20.7■□□□□ 0.9
ABCF3-203ENST00000429586 SASH1O94885 1247 aa20.69■□□□□ 0.9
ABCF3-203ENST00000429586 FAM196AQ6ZSG2 479 aa20.69■□□□□ 0.9
ABCF3-203ENST00000429586 AMIGO3Q86WK7 504 aa20.69■□□□□ 0.9
ABCF3-203ENST00000429586 UPF2Q9HAU5 1272 aaKnown RBP20.69■□□□□ 0.9
ABCF3-203ENST00000429586 PCCAP05165 728 aaPredicted RBP20.69■□□□□ 0.9
ABCF3-203ENST00000429586 PTPN12Q05209 780 aaKnown RBP20.69■□□□□ 0.9
ABCF3-203ENST00000429586 G3BP1Q13283 466 aaKnown RBP eCLIP20.69■□□□□ 0.91e-6■■■■□ 24.7
ABCF3-203ENST00000429586 ZBTB38Q8NAP3 1195 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms