RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 ZBTB3Q9H5J0 574 aa17.28■□□□□ 0.36
HLA-F-219ENST00000429294 ERBB4Q15303 1308 aa17.27■□□□□ 0.36
HLA-F-219ENST00000429294 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.36
HLA-F-219ENST00000429294 ITGBL1O95965 494 aaPredicted RBP17.27■□□□□ 0.36
HLA-F-219ENST00000429294 HOXA10P31260 410 aaPredicted RBP17.27■□□□□ 0.36
HLA-F-219ENST00000429294 TTLL7Q6ZT98 887 aa17.27■□□□□ 0.36
HLA-F-219ENST00000429294 PPP1R42Q7Z4L9 355 aa17.27■□□□□ 0.36
HLA-F-219ENST00000429294 ABCC12Q96J65 1359 aa17.27■□□□□ 0.35
HLA-F-219ENST00000429294 IBTKQ9P2D0 1353 aaPredicted RBP17.27■□□□□ 0.35
HLA-F-219ENST00000429294 CNTROBQ8N137 903 aa17.26■□□□□ 0.35
HLA-F-219ENST00000429294 LARGE2Q8N3Y3 721 aa17.26■□□□□ 0.35
HLA-F-219ENST00000429294 PLEKHF1Q96S99 279 aa17.26■□□□□ 0.35
HLA-F-219ENST00000429294 THUMPD2Q9BTF0 503 aaKnown RBP17.26■□□□□ 0.35
HLA-F-219ENST00000429294 GJA3Q9Y6H8 435 aa17.26■□□□□ 0.35
HLA-F-219ENST00000429294 NUP98P52948 1817 aa17.26■□□□□ 0.35
HLA-F-219ENST00000429294 PARP10Q53GL7 1025 aa17.25■□□□□ 0.35
HLA-F-219ENST00000429294 GIGYF2Q6Y7W6 1299 aaKnown RBP17.25■□□□□ 0.35
HLA-F-219ENST00000429294 NLRP3Q96P20 1036 aa17.25■□□□□ 0.35
HLA-F-219ENST00000429294 CRAMP1Q96RY5 1269 aa17.25■□□□□ 0.35
HLA-F-219ENST00000429294 TSPYL4Q9UJ04 414 aa17.25■□□□□ 0.35
HLA-F-219ENST00000429294 DLG5Q8TDM6 1919 aa17.25■□□□□ 0.35
HLA-F-219ENST00000429294 RIC1Q4ADV7 1423 aa17.24■□□□□ 0.35
HLA-F-219ENST00000429294 SUSD4Q5VX71 490 aa17.24■□□□□ 0.35
HLA-F-219ENST00000429294 MAP1SQ66K74 1059 aaPredicted RBP17.24■□□□□ 0.35
HLA-F-219ENST00000429294 ZNF34Q8IZ26 560 aa17.24■□□□□ 0.35
HLA-F-219ENST00000429294 KDM3BQ7LBC6 1761 aa17.24■□□□□ 0.35
HLA-F-219ENST00000429294 UBN2Q6ZU65 1347 aa17.23■□□□□ 0.35
HLA-F-219ENST00000429294 TCERG1O14776 1098 aaKnown RBP17.23■□□□□ 0.35
HLA-F-219ENST00000429294 PPEF1O14829 653 aaPredicted RBP17.23■□□□□ 0.35
HLA-F-219ENST00000429294 CTCFP49711 727 aaPredicted RBP17.23■□□□□ 0.35
HLA-F-219ENST00000429294 VEGFBP49765 207 aa17.23■□□□□ 0.35
HLA-F-219ENST00000429294 DEFB115Q30KQ5 88 aa17.23■□□□□ 0.35
HLA-F-219ENST00000429294 FOXN1O15353 648 aa17.22■□□□□ 0.35
HLA-F-219ENST00000429294 EIF2S2P20042 333 aaKnown RBP17.22■□□□□ 0.35
HLA-F-219ENST00000429294 NIM1KQ8IY84 436 aa17.22■□□□□ 0.35
HLA-F-219ENST00000429294 UTP14AQ9BVJ6 771 aaKnown RBP17.22■□□□□ 0.35
HLA-F-219ENST00000429294 PRDM10Q9NQV6 1147 aa17.22■□□□□ 0.35
HLA-F-219ENST00000429294 ABT1Q9ULW3 272 aaKnown RBP17.22■□□□□ 0.35
HLA-F-219ENST00000429294 NTSR2O95665 410 aa17.21■□□□□ 0.35
HLA-F-219ENST00000429294 RIPK4P57078 832 aa17.21■□□□□ 0.35
HLA-F-219ENST00000429294 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.35
HLA-F-219ENST00000429294 BABAM1Q9NWV8 329 aa17.21■□□□□ 0.35
HLA-F-219ENST00000429294 PPIP5K2O43314 1243 aa17.2■□□□□ 0.34
HLA-F-219ENST00000429294 HSP90AB3PQ58FF7 597 aa17.2■□□□□ 0.34
HLA-F-219ENST00000429294 SUPT20HQ8NEM7 779 aa17.2■□□□□ 0.34
HLA-F-219ENST00000429294 VPS33BQ9H267 617 aa17.2■□□□□ 0.34
HLA-F-219ENST00000429294 SNED1Q8TER0 1413 aa17.2■□□□□ 0.34
HLA-F-219ENST00000429294 RASSF10A6NK89 507 aa17.19■□□□□ 0.34
HLA-F-219ENST00000429294 USP50Q70EL3 339 aaPredicted RBP17.19■□□□□ 0.34
HLA-F-219ENST00000429294 DDX21Q9NR30 783 aaKnown RBP eCLIP17.19■□□□□ 0.34
HLA-F-219ENST00000429294 MAP2K1Q02750 393 aaPredicted RBP17.18■□□□□ 0.34
HLA-F-219ENST00000429294 SLC10A5Q5PT55 438 aa17.18■□□□□ 0.34
HLA-F-219ENST00000429294 WBP1LQ9NX94 342 aa17.18■□□□□ 0.34
HLA-F-219ENST00000429294 ATP6V0A2Q9Y487 856 aa17.18■□□□□ 0.34
HLA-F-219ENST00000429294 BBOX1O75936 387 aa17.17■□□□□ 0.34
HLA-F-219ENST00000429294 EPS15P42566 896 aa17.17■□□□□ 0.34
HLA-F-219ENST00000429294 SCNN1DP51172 638 aa17.17■□□□□ 0.34
HLA-F-219ENST00000429294 RALBP1Q15311 655 aa17.17■□□□□ 0.34
HLA-F-219ENST00000429294 PAXIP1Q6ZW49 1069 aaPredicted RBP17.17■□□□□ 0.34
HLA-F-219ENST00000429294 BEGAINQ9BUH8 593 aa17.17■□□□□ 0.34
HLA-F-219ENST00000429294 ADAMTSL1Q8N6G6 1762 aa17.17■□□□□ 0.34
HLA-F-219ENST00000429294 WDR33Q9C0J8 1336 aaKnown RBP17.17■□□□□ 0.34
HLA-F-219ENST00000429294 ECE1P42892 770 aa17.16■□□□□ 0.34
HLA-F-219ENST00000429294 C3orf67Q6ZVT6 689 aa17.16■□□□□ 0.34
HLA-F-219ENST00000429294 ZNRF3Q9ULT6 936 aa17.16■□□□□ 0.34
HLA-F-219ENST00000429294 ANXA1P04083 346 aa17.15■□□□□ 0.34
HLA-F-219ENST00000429294 TMPOP42166 694 aaKnown RBP17.15■□□□□ 0.34
HLA-F-219ENST00000429294 LBX1P52954 281 aa17.15■□□□□ 0.34
HLA-F-219ENST00000429294 AIMP1Q12904 312 aaKnown RBP17.15■□□□□ 0.34
HLA-F-219ENST00000429294 PDIA6Q15084 440 aa17.15■□□□□ 0.34
HLA-F-219ENST00000429294 AOC3Q16853 763 aa17.15■□□□□ 0.34
HLA-F-219ENST00000429294 DPP8Q6V1X1 898 aaPredicted RBP17.15■□□□□ 0.34
HLA-F-219ENST00000429294 DDX46Q7L014 1031 aaKnown RBP17.15■□□□□ 0.34
HLA-F-219ENST00000429294 COPS6Q7L5N1 327 aa17.15■□□□□ 0.34
HLA-F-219ENST00000429294 ADARB2Q9NS39 739 aaKnown RBP17.15■□□□□ 0.34
HLA-F-219ENST00000429294 TRMT112Q9UI30 125 aaKnown RBP17.15■□□□□ 0.34
HLA-F-219ENST00000429294 ABCC4O15439 1325 aa17.15■□□□□ 0.34
HLA-F-219ENST00000429294 PROSER3Q2NL68 480 aa17.14■□□□□ 0.33
HLA-F-219ENST00000429294 LRP10Q7Z4F1 713 aa17.14■□□□□ 0.33
HLA-F-219ENST00000429294 SP8Q8IXZ3 490 aa17.14■□□□□ 0.33
HLA-F-219ENST00000429294 MPNDQ8N594 471 aa17.14■□□□□ 0.33
HLA-F-219ENST00000429294 XAGE3Q8WTP9 111 aa17.14■□□□□ 0.33
HLA-F-219ENST00000429294 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
HLA-F-219ENST00000429294 CXCL9Q07325 125 aa17.13■□□□□ 0.33
HLA-F-219ENST00000429294 TCIRG1Q13488 830 aa17.13■□□□□ 0.33
HLA-F-219ENST00000429294 TMC4Q7Z404 712 aa17.13■□□□□ 0.33
HLA-F-219ENST00000429294 NLRP10Q86W26 655 aa17.13■□□□□ 0.33
HLA-F-219ENST00000429294 BCL2L13Q9BXK5 485 aa17.13■□□□□ 0.33
HLA-F-219ENST00000429294 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
HLA-F-219ENST00000429294 GPRC5DQ9NZD1 345 aa17.13■□□□□ 0.33
HLA-F-219ENST00000429294 SH3TC1Q8TE82 1336 aa17.13■□□□□ 0.33
HLA-F-219ENST00000429294 COL4A5P29400 1685 aa17.13■□□□□ 0.33
HLA-F-219ENST00000429294 HCLS1P14317 486 aaPredicted RBP17.12■□□□□ 0.33
HLA-F-219ENST00000429294 GRM1Q13255 1194 aa17.12■□□□□ 0.33
HLA-F-219ENST00000429294 TNIP1Q15025 636 aa17.12■□□□□ 0.33
HLA-F-219ENST00000429294 NEUROD2Q15784 382 aa17.12■□□□□ 0.33
HLA-F-219ENST00000429294 CIAPIN1Q6FI81 312 aa17.12■□□□□ 0.33
HLA-F-219ENST00000429294 CAPNS2Q96L46 248 aa17.12■□□□□ 0.33
HLA-F-219ENST00000429294 KIAA2012Q0VF49 1180 aa17.11■□□□□ 0.33
HLA-F-219ENST00000429294 GRAPQ13588 217 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms