RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 NLRP3Q96P20 1036 aa13.42□□□□□ -0.26
ZNF3-208ENST00000428683 UTP14AQ9BVJ6 771 aaKnown RBP13.42□□□□□ -0.26
ZNF3-208ENST00000428683 CCDC88AQ3V6T2 1871 aa13.42□□□□□ -0.26
ZNF3-208ENST00000428683 HOXA10P31260 410 aaPredicted RBP13.41□□□□□ -0.26
ZNF3-208ENST00000428683 IARSP41252 1262 aaKnown RBP13.41□□□□□ -0.26
ZNF3-208ENST00000428683 KLRG1Q96E93 195 aa13.41□□□□□ -0.26
ZNF3-208ENST00000428683 DDX21Q9NR30 783 aaKnown RBP eCLIP13.41□□□□□ -0.26
ZNF3-208ENST00000428683 CHPF2Q9P2E5 772 aa13.41□□□□□ -0.26
ZNF3-208ENST00000428683 LAMB4A4D0S4 1761 aa13.4□□□□□ -0.26
ZNF3-208ENST00000428683 FER1L6Q2WGJ9 1857 aa13.4□□□□□ -0.26
ZNF3-208ENST00000428683 APAF1O14727 1248 aa13.4□□□□□ -0.26
ZNF3-208ENST00000428683 HCLS1P14317 486 aaPredicted RBP13.4□□□□□ -0.26
ZNF3-208ENST00000428683 HSP90AB3PQ58FF7 597 aa13.4□□□□□ -0.26
ZNF3-208ENST00000428683 HDGFL1Q5TGJ6 251 aa13.4□□□□□ -0.26
ZNF3-208ENST00000428683 CRAMP1Q96RY5 1269 aa13.4□□□□□ -0.26
ZNF3-208ENST00000428683 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
ZNF3-208ENST00000428683 PPEF1O14829 653 aaPredicted RBP13.39□□□□□ -0.27
ZNF3-208ENST00000428683 TCIRG1Q13488 830 aa13.39□□□□□ -0.27
ZNF3-208ENST00000428683 SLC10A5Q5PT55 438 aa13.39□□□□□ -0.27
ZNF3-208ENST00000428683 CC2D2BQ6DHV5 1058 aa13.39□□□□□ -0.27
ZNF3-208ENST00000428683 CHADLQ6NUI6 762 aa13.39□□□□□ -0.27
ZNF3-208ENST00000428683 NLRP10Q86W26 655 aa13.39□□□□□ -0.27
ZNF3-208ENST00000428683 JDP2Q8WYK2 163 aa13.39□□□□□ -0.27
ZNF3-208ENST00000428683 CFAP44Q96MT7 982 aa13.39□□□□□ -0.27
ZNF3-208ENST00000428683 TRMT112Q9UI30 125 aaKnown RBP13.39□□□□□ -0.27
ZNF3-208ENST00000428683 TNRC6CQ9HCJ0 1690 aaKnown RBP13.39□□□□□ -0.27
ZNF3-208ENST00000428683 CACNA1SQ13698 1873 aa13.38□□□□□ -0.27
ZNF3-208ENST00000428683 IBTKQ9P2D0 1353 aaPredicted RBP13.38□□□□□ -0.27
ZNF3-208ENST00000428683 IQCA1LA6NCM1 817 aa13.38□□□□□ -0.27
ZNF3-208ENST00000428683 ELL2O00472 640 aaPredicted RBP13.38□□□□□ -0.27
ZNF3-208ENST00000428683 EAPPQ56P03 285 aaPredicted RBP13.38□□□□□ -0.27
ZNF3-208ENST00000428683 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
ZNF3-208ENST00000428683 PSMD1Q99460 953 aa13.38□□□□□ -0.27
ZNF3-208ENST00000428683 TMX4Q9H1E5 349 aaPredicted RBP13.38□□□□□ -0.27
ZNF3-208ENST00000428683 TAF1DQ9H5J8 278 aaPredicted RBP13.38□□□□□ -0.27
ZNF3-208ENST00000428683 MBIPQ9NS73 344 aa13.38□□□□□ -0.27
ZNF3-208ENST00000428683 CLEC11AQ9Y240 323 aa13.38□□□□□ -0.27
ZNF3-208ENST00000428683 GJA3Q9Y6H8 435 aa13.38□□□□□ -0.27
ZNF3-208ENST00000428683 NUP98P52948 1817 aa13.38□□□□□ -0.27
ZNF3-208ENST00000428683 TIAM2Q8IVF5 1701 aa13.38□□□□□ -0.27
ZNF3-208ENST00000428683 FZD9O00144 591 aa13.37□□□□□ -0.27
ZNF3-208ENST00000428683 ANKRD13DQ6ZTN6 518 aa13.37□□□□□ -0.27
ZNF3-208ENST00000428683 LARGE2Q8N3Y3 721 aa13.37□□□□□ -0.27
ZNF3-208ENST00000428683 DBF4Q9UBU7 674 aaPredicted RBP13.37□□□□□ -0.27
ZNF3-208ENST00000428683 WDR90Q96KV7 1748 aa13.36□□□□□ -0.27
ZNF3-208ENST00000428683 ATP5J2-PTCD1G3V325 749 aa13.36□□□□□ -0.27
ZNF3-208ENST00000428683 EIF6P56537 245 aaKnown RBP13.36□□□□□ -0.27
ZNF3-208ENST00000428683 CCDC184Q52MB2 194 aa13.36□□□□□ -0.27
ZNF3-208ENST00000428683 IFFO2Q5TF58 517 aa13.36□□□□□ -0.27
ZNF3-208ENST00000428683 PLBD2Q8NHP8 589 aa13.36□□□□□ -0.27
ZNF3-208ENST00000428683 L3MBTL3Q96JM7 780 aaPredicted RBP13.36□□□□□ -0.27
ZNF3-208ENST00000428683 HACL1Q9UJ83 578 aa13.36□□□□□ -0.27
ZNF3-208ENST00000428683 RNF123Q5XPI4 1314 aa13.36□□□□□ -0.27
ZNF3-208ENST00000428683 ZNF853P0CG23 659 aa13.35□□□□□ -0.27
ZNF3-208ENST00000428683 EPHX2P34913 555 aa13.35□□□□□ -0.27
ZNF3-208ENST00000428683 RTL5Q5HYW3 569 aaPredicted RBP13.35□□□□□ -0.27
ZNF3-208ENST00000428683 JMYQ8N9B5 988 aa13.35□□□□□ -0.27
ZNF3-208ENST00000428683 ATP6V0A2Q9Y487 856 aa13.35□□□□□ -0.27
ZNF3-208ENST00000428683 ABCC4O15439 1325 aa13.35□□□□□ -0.27
ZNF3-208ENST00000428683 SH3TC1Q8TE82 1336 aa13.35□□□□□ -0.27
ZNF3-208ENST00000428683 RIC1Q4ADV7 1423 aa13.34□□□□□ -0.27
ZNF3-208ENST00000428683 PPIP5K2O43314 1243 aa13.34□□□□□ -0.27
ZNF3-208ENST00000428683 BBOX1O75936 387 aa13.34□□□□□ -0.27
ZNF3-208ENST00000428683 HOXB7P09629 217 aa13.34□□□□□ -0.27
ZNF3-208ENST00000428683 GNAI1P63096 354 aa13.34□□□□□ -0.27
ZNF3-208ENST00000428683 GRIPAP1Q4V328 841 aa13.34□□□□□ -0.27
ZNF3-208ENST00000428683 DDX46Q7L014 1031 aaKnown RBP13.34□□□□□ -0.27
ZNF3-208ENST00000428683 LDHDQ86WU2 507 aa13.34□□□□□ -0.27
ZNF3-208ENST00000428683 GPC2Q8N158 579 aa13.34□□□□□ -0.27
ZNF3-208ENST00000428683 FAM89AQ96GI7 184 aa13.34□□□□□ -0.27
ZNF3-208ENST00000428683 PHAXQ9H814 394 aaKnown RBP13.34□□□□□ -0.27
ZNF3-208ENST00000428683 HYPKQ9NX55 129 aa13.34□□□□□ -0.27
ZNF3-208ENST00000428683 DICER1Q9UPY3 1922 aaKnown RBP13.34□□□□□ -0.27
ZNF3-208ENST00000428683 ARFGEF2Q9Y6D5 1785 aa13.33□□□□□ -0.28
ZNF3-208ENST00000428683 SNED1Q8TER0 1413 aa13.33□□□□□ -0.28
ZNF3-208ENST00000428683 AOC3Q16853 763 aa13.33□□□□□ -0.28
ZNF3-208ENST00000428683 RIC3Q7Z5B4 369 aa13.33□□□□□ -0.28
ZNF3-208ENST00000428683 SP8Q8IXZ3 490 aa13.33□□□□□ -0.28
ZNF3-208ENST00000428683 NIM1KQ8IY84 436 aa13.33□□□□□ -0.28
ZNF3-208ENST00000428683 MPNDQ8N594 471 aa13.33□□□□□ -0.28
ZNF3-208ENST00000428683 C8orf58Q8NAV2 365 aa13.33□□□□□ -0.28
ZNF3-208ENST00000428683 ISCA1Q9BUE6 129 aa13.33□□□□□ -0.28
ZNF3-208ENST00000428683 IFT57Q9NWB7 429 aa13.33□□□□□ -0.28
ZNF3-208ENST00000428683 MKRN1Q9UHC7 482 aaKnown RBP13.33□□□□□ -0.28
ZNF3-208ENST00000428683 CALD1Q05682 793 aaKnown RBP13.32□□□□□ -0.28
ZNF3-208ENST00000428683 MAP1SQ66K74 1059 aaPredicted RBP13.32□□□□□ -0.28
ZNF3-208ENST00000428683 DPP8Q6V1X1 898 aaPredicted RBP13.32□□□□□ -0.28
ZNF3-208ENST00000428683 ITGBL1O95965 494 aaPredicted RBP13.31□□□□□ -0.28
ZNF3-208ENST00000428683 LMOD1P29536 600 aaPredicted RBP13.31□□□□□ -0.28
ZNF3-208ENST00000428683 EPS15P42566 896 aa13.31□□□□□ -0.28
ZNF3-208ENST00000428683 GRAPQ13588 217 aa13.31□□□□□ -0.28
ZNF3-208ENST00000428683 PNMA8AQ86V59 439 aaPredicted RBP13.31□□□□□ -0.28
ZNF3-208ENST00000428683 CNTROBQ8N137 903 aa13.31□□□□□ -0.28
ZNF3-208ENST00000428683 SUPT20HQ8NEM7 779 aa13.31□□□□□ -0.28
ZNF3-208ENST00000428683 GRAPLQ8TC17 118 aaPredicted RBP13.31□□□□□ -0.28
ZNF3-208ENST00000428683 CREBZFQ9NS37 354 aa13.31□□□□□ -0.28
ZNF3-208ENST00000428683 GOLGA2Q08379 1002 aa13.3□□□□□ -0.28
ZNF3-208ENST00000428683 JARID2Q92833 1246 aaPredicted RBP13.3□□□□□ -0.28
ZNF3-208ENST00000428683 MYD88Q99836 296 aa13.3□□□□□ -0.28
ZNF3-208ENST00000428683 PASKQ96RG2 1323 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms