RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 HOXA10P31260 410 aaPredicted RBP35.52■■■■□ 3.28
LMO1-202ENST00000428101 RTKN2Q8IZC4 609 aa35.52■■■■□ 3.28
LMO1-202ENST00000428101 C3orf67Q6ZVT6 689 aa35.51■■■■□ 3.28
LMO1-202ENST00000428101 CHPF2Q9P2E5 772 aa35.51■■■■□ 3.28
LMO1-202ENST00000428101 ANKRD36CQ5JPF3 1778 aa35.51■■■■□ 3.27
LMO1-202ENST00000428101 HOXB7P09629 217 aa35.5■■■■□ 3.27
LMO1-202ENST00000428101 ZNF853P0CG23 659 aa35.5■■■■□ 3.27
LMO1-202ENST00000428101 SMC1BQ8NDV3 1235 aa35.5■■■■□ 3.27
LMO1-202ENST00000428101 ZNF277Q9NRM2 450 aaPredicted RBP35.5■■■■□ 3.27
LMO1-202ENST00000428101 SNED1Q8TER0 1413 aa35.49■■■■□ 3.27
LMO1-202ENST00000428101 RPGRQ92834 1020 aaKnown RBP35.49■■■■□ 3.27
LMO1-202ENST00000428101 UTP14AQ9BVJ6 771 aaKnown RBP35.49■■■■□ 3.27
LMO1-202ENST00000428101 MBIPQ9NS73 344 aa35.49■■■■□ 3.27
LMO1-202ENST00000428101 ZEB1P37275 1124 aaPredicted RBP35.48■■■■□ 3.27
LMO1-202ENST00000428101 HDGFL1Q5TGJ6 251 aa35.48■■■■□ 3.27
LMO1-202ENST00000428101 DNAJC5GQ8N7S2 189 aa35.48■■■■□ 3.27
LMO1-202ENST00000428101 DDNO94850 711 aaPredicted RBP35.47■■■■□ 3.27
LMO1-202ENST00000428101 CCDC184Q52MB2 194 aa35.47■■■■□ 3.27
LMO1-202ENST00000428101 SLC10A5Q5PT55 438 aa35.47■■■■□ 3.27
LMO1-202ENST00000428101 HSP90AB3PQ58FF7 597 aa35.46■■■■□ 3.27
LMO1-202ENST00000428101 DUSP27Q5VZP5 1158 aa35.46■■■■□ 3.27
LMO1-202ENST00000428101 TCIRG1Q13488 830 aa35.45■■■■□ 3.27
LMO1-202ENST00000428101 NLRP10Q86W26 655 aa35.45■■■■□ 3.27
LMO1-202ENST00000428101 SYNE4Q8N205 404 aa35.45■■■■□ 3.27
LMO1-202ENST00000428101 RBM17Q96I25 401 aaKnown RBP35.45■■■■□ 3.27
LMO1-202ENST00000428101 CRAMP1Q96RY5 1269 aa35.45■■■■□ 3.27
LMO1-202ENST00000428101 NLRP3Q96P20 1036 aa35.44■■■■□ 3.26
LMO1-202ENST00000428101 HTRA3P83110 453 aa35.43■■■■□ 3.26
LMO1-202ENST00000428101 IFT57Q9NWB7 429 aa35.43■■■■□ 3.26
LMO1-202ENST00000428101 DBF4Q9UBU7 674 aaPredicted RBP35.43■■■■□ 3.26
LMO1-202ENST00000428101 RNF123Q5XPI4 1314 aa35.42■■■■□ 3.26
LMO1-202ENST00000428101 SLC51AQ86UW1 340 aa35.42■■■■□ 3.26
LMO1-202ENST00000428101 PSMD1Q99460 953 aa35.42■■■■□ 3.26
LMO1-202ENST00000428101 IARSP41252 1262 aaKnown RBP35.41■■■■□ 3.26
LMO1-202ENST00000428101 CC2D2BQ6DHV5 1058 aa35.41■■■■□ 3.26
LMO1-202ENST00000428101 PLBD2Q8NHP8 589 aa35.4■■■■□ 3.26
LMO1-202ENST00000428101 LAMB2P55268 1798 aa35.39■■■■□ 3.26
LMO1-202ENST00000428101 GNAI1P63096 354 aa35.39■■■■□ 3.26
LMO1-202ENST00000428101 ZNF541Q9H0D2 1346 aa35.38■■■■□ 3.25
LMO1-202ENST00000428101 PPEF1O14829 653 aaPredicted RBP35.38■■■■□ 3.25
LMO1-202ENST00000428101 CALD1Q05682 793 aaKnown RBP35.38■■■■□ 3.25
LMO1-202ENST00000428101 ANKRD13DQ6ZTN6 518 aa35.38■■■■□ 3.25
LMO1-202ENST00000428101 L3MBTL3Q96JM7 780 aaPredicted RBP35.37■■■■□ 3.25
LMO1-202ENST00000428101 HYPKQ9NX55 129 aa35.37■■■■□ 3.25
LMO1-202ENST00000428101 HCLS1P14317 486 aaPredicted RBP35.36■■■■□ 3.25
LMO1-202ENST00000428101 TRMT112Q9UI30 125 aaKnown RBP35.36■■■■□ 3.25
LMO1-202ENST00000428101 SCN4AP35499 1836 aa35.35■■■■□ 3.25
LMO1-202ENST00000428101 FZD9O00144 591 aa35.35■■■■□ 3.25
LMO1-202ENST00000428101 TCERG1O14776 1098 aaKnown RBP35.35■■■■□ 3.25
LMO1-202ENST00000428101 GRIPAP1Q4V328 841 aa35.35■■■■□ 3.25
LMO1-202ENST00000428101 SH3TC1Q8TE82 1336 aa35.34■■■■□ 3.25
LMO1-202ENST00000428101 COL4A5P29400 1685 aa35.33■■■■□ 3.25
LMO1-202ENST00000428101 ABCC4O15439 1325 aa35.33■■■■□ 3.25
LMO1-202ENST00000428101 ZNF428Q96B54 188 aa35.33■■■■□ 3.25
LMO1-202ENST00000428101 ISCA1Q9BUE6 129 aa35.33■■■■□ 3.25
LMO1-202ENST00000428101 ELL2O00472 640 aaPredicted RBP35.32■■■■□ 3.24
LMO1-202ENST00000428101 POTEIP0CG38 1075 aa35.32■■■■□ 3.24
LMO1-202ENST00000428101 POTEJP0CG39 1038 aa35.32■■■■□ 3.24
LMO1-202ENST00000428101 C8orf58Q8NAV2 365 aa35.31■■■■□ 3.24
LMO1-202ENST00000428101 ATP6V0A2Q9Y487 856 aa35.31■■■■□ 3.24
LMO1-202ENST00000428101 IQCA1LA6NCM1 817 aa35.3■■■■□ 3.24
LMO1-202ENST00000428101 ZNF316A6NFI3 1004 aaPredicted RBP35.3■■■■□ 3.24
LMO1-202ENST00000428101 ATP5J2-PTCD1G3V325 749 aa35.3■■■■□ 3.24
LMO1-202ENST00000428101 JDP2Q8WYK2 163 aa35.29■■■■□ 3.24
LMO1-202ENST00000428101 KLRG1Q96E93 195 aa35.29■■■■□ 3.24
LMO1-202ENST00000428101 TAF1DQ9H5J8 278 aaPredicted RBP35.29■■■■□ 3.24
LMO1-202ENST00000428101 DDX60Q8IY21 1712 aaKnown RBP35.29■■■■□ 3.24
LMO1-202ENST00000428101 CHADLQ6NUI6 762 aa35.28■■■■□ 3.24
LMO1-202ENST00000428101 PHAXQ9H814 394 aaKnown RBP35.28■■■■□ 3.24
LMO1-202ENST00000428101 TAF1P21675 1872 aa35.28■■■■□ 3.24
LMO1-202ENST00000428101 BBOX1O75936 387 aa35.26■■■■□ 3.24
LMO1-202ENST00000428101 TRIM28Q13263 835 aaKnown RBP35.25■■■■□ 3.23
LMO1-202ENST00000428101 GPC2Q8N158 579 aa35.25■■■■□ 3.23
LMO1-202ENST00000428101 FAM89AQ96GI7 184 aa35.25■■■■□ 3.23
LMO1-202ENST00000428101 CCDC27Q2M243 656 aa35.24■■■■□ 3.23
LMO1-202ENST00000428101 DDX46Q7L014 1031 aaKnown RBP35.24■■■■□ 3.23
LMO1-202ENST00000428101 LARGE2Q8N3Y3 721 aa35.24■■■■□ 3.23
LMO1-202ENST00000428101 SP8Q8IXZ3 490 aa35.23■■■■□ 3.23
LMO1-202ENST00000428101 TSPYL6Q8N831 410 aa35.23■■■■□ 3.23
LMO1-202ENST00000428101 TMX4Q9H1E5 349 aaPredicted RBP35.23■■■■□ 3.23
LMO1-202ENST00000428101 HACL1Q9UJ83 578 aa35.23■■■■□ 3.23
LMO1-202ENST00000428101 GRAPQ13588 217 aa35.22■■■■□ 3.23
LMO1-202ENST00000428101 RIC3Q7Z5B4 369 aa35.22■■■■□ 3.23
LMO1-202ENST00000428101 LDHDQ86WU2 507 aa35.22■■■■□ 3.23
LMO1-202ENST00000428101 WWC1Q8IX03 1113 aa35.22■■■■□ 3.23
LMO1-202ENST00000428101 GRAPLQ8TC17 118 aaPredicted RBP35.22■■■■□ 3.23
LMO1-202ENST00000428101 EIF6P56537 245 aaKnown RBP35.21■■■■□ 3.23
LMO1-202ENST00000428101 GOLGA2Q08379 1002 aa35.21■■■■□ 3.23
LMO1-202ENST00000428101 TSR2Q969E8 191 aaKnown RBP35.21■■■■□ 3.23
LMO1-202ENST00000428101 RTFDC1Q9BY42 306 aaPredicted RBP35.21■■■■□ 3.23
LMO1-202ENST00000428101 MRS2Q9HD23 443 aa35.21■■■■□ 3.23
LMO1-202ENST00000428101 ANP32CO43423 234 aa35.2■■■■□ 3.23
LMO1-202ENST00000428101 JMYQ8N9B5 988 aa35.2■■■■□ 3.23
LMO1-202ENST00000428101 PCNTO95613 3336 aa35.2■■■■□ 3.23
LMO1-202ENST00000428101 PPIP5K2O43314 1243 aa35.19■■■■□ 3.22
LMO1-202ENST00000428101 EPHX2P34913 555 aa35.19■■■■□ 3.22
LMO1-202ENST00000428101 AOC3Q16853 763 aa35.19■■■■□ 3.22
LMO1-202ENST00000428101 VPS33BQ9H267 617 aa35.19■■■■□ 3.22
LMO1-202ENST00000428101 SF3B3Q15393 1217 aaKnown RBP35.18■■■■□ 3.22
LMO1-202ENST00000428101 RTL5Q5HYW3 569 aaPredicted RBP35.18■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms