RNA–Protein interactions for RNA: ENST00000427404.5

FARP1-204, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-204ENST00000427404 CACNA1SQ13698 1873 aa9.36□□□□□ -0.91
FARP1-204ENST00000427404 FAM177BA6PVY3 158 aa9.36□□□□□ -0.91
FARP1-204ENST00000427404 LMNB1P20700 586 aa9.36□□□□□ -0.91
FARP1-204ENST00000427404 GTF2E1P29083 439 aaPredicted RBP9.36□□□□□ -0.91
FARP1-204ENST00000427404 RASSF7Q02833 373 aa9.36□□□□□ -0.91
FARP1-204ENST00000427404 TCIRG1Q13488 830 aa9.36□□□□□ -0.91
FARP1-204ENST00000427404 ERFEQ4G0M1 354 aa9.36□□□□□ -0.91
FARP1-204ENST00000427404 NUTM1Q86Y26 1132 aa9.36□□□□□ -0.91
FARP1-204ENST00000427404 PLBD2Q8NHP8 589 aa9.36□□□□□ -0.91
FARP1-204ENST00000427404 C7orf43Q8WVR3 580 aa9.36□□□□□ -0.91
FARP1-204ENST00000427404 RNF181Q9P0P0 153 aa9.36□□□□□ -0.91
FARP1-204ENST00000427404 C21orf2O43822 256 aa9.35□□□□□ -0.91
FARP1-204ENST00000427404 ALDH1B1P30837 517 aa9.35□□□□□ -0.91
FARP1-204ENST00000427404 HOXA10P31260 410 aaPredicted RBP9.35□□□□□ -0.91
FARP1-204ENST00000427404 PRELPP51888 382 aa9.35□□□□□ -0.91
FARP1-204ENST00000427404 C1QTNF8P60827 252 aa9.35□□□□□ -0.91
FARP1-204ENST00000427404 AIMP1Q12904 312 aaKnown RBP9.35□□□□□ -0.91
FARP1-204ENST00000427404 SLC10A5Q5PT55 438 aa9.35□□□□□ -0.91
FARP1-204ENST00000427404 NLRP10Q86W26 655 aa9.35□□□□□ -0.91
FARP1-204ENST00000427404 TIAM2Q8IVF5 1701 aa9.35□□□□□ -0.91
FARP1-204ENST00000427404 WDR63Q8IWG1 891 aa9.35□□□□□ -0.91
FARP1-204ENST00000427404 C8orf58Q8NAV2 365 aa9.35□□□□□ -0.91
FARP1-204ENST00000427404 UTP14AQ9BVJ6 771 aaKnown RBP9.35□□□□□ -0.91
FARP1-204ENST00000427404 DICER1Q9UPY3 1922 aaKnown RBP9.35□□□□□ -0.91
FARP1-204ENST00000427404 SNED1Q8TER0 1413 aa9.34□□□□□ -0.91
FARP1-204ENST00000427404 KIF3CO14782 793 aa9.34□□□□□ -0.91
FARP1-204ENST00000427404 CCDC93Q567U6 631 aa9.34□□□□□ -0.91
FARP1-204ENST00000427404 CCDC30Q5VVM6 783 aa9.34□□□□□ -0.91
FARP1-204ENST00000427404 ANKRD13DQ6ZTN6 518 aa9.34□□□□□ -0.91
FARP1-204ENST00000427404 ZNF526Q8TF50 670 aaPredicted RBP9.34□□□□□ -0.91
FARP1-204ENST00000427404 TSR2Q969E8 191 aaKnown RBP9.34□□□□□ -0.91
FARP1-204ENST00000427404 ISCA1Q9BUE6 129 aa9.34□□□□□ -0.91
FARP1-204ENST00000427404 TAOK3Q9H2K8 898 aa9.34□□□□□ -0.91
FARP1-204ENST00000427404 CCDC88AQ3V6T2 1871 aa9.34□□□□□ -0.91
FARP1-204ENST00000427404 ELL2O00472 640 aaPredicted RBP9.33□□□□□ -0.92
FARP1-204ENST00000427404 TRIM28Q13263 835 aaKnown RBP9.33□□□□□ -0.92
FARP1-204ENST00000427404 TSPYL6Q8N831 410 aa9.33□□□□□ -0.92
FARP1-204ENST00000427404 CRAMP1Q96RY5 1269 aa9.33□□□□□ -0.92
FARP1-204ENST00000427404 KDM2BQ8NHM5 1336 aa9.32□□□□□ -0.92
FARP1-204ENST00000427404 SH3TC1Q8TE82 1336 aa9.32□□□□□ -0.92
FARP1-204ENST00000427404 FANCIQ9NVI1 1328 aa9.32□□□□□ -0.92
FARP1-204ENST00000427404 LAMB2P55268 1798 aa9.32□□□□□ -0.92
FARP1-204ENST00000427404 FKBP4Q02790 459 aaKnown RBP eCLIP9.32□□□□□ -0.92
FARP1-204ENST00000427404 GOLGA2Q08379 1002 aa9.32□□□□□ -0.92
FARP1-204ENST00000427404 CC2D2BQ6DHV5 1058 aa9.32□□□□□ -0.92
FARP1-204ENST00000427404 C3orf67Q6ZVT6 689 aa9.32□□□□□ -0.92
FARP1-204ENST00000427404 RTKN2Q8IZC4 609 aa9.32□□□□□ -0.92
FARP1-204ENST00000427404 FAM9BQ8IZU0 186 aa9.32□□□□□ -0.92
FARP1-204ENST00000427404 RPGRQ92834 1020 aaKnown RBP9.32□□□□□ -0.92
FARP1-204ENST00000427404 RBM17Q96I25 401 aaKnown RBP9.32□□□□□ -0.92
FARP1-204ENST00000427404 NLRP3Q96P20 1036 aa9.32□□□□□ -0.92
FARP1-204ENST00000427404 ZNF219Q9P2Y4 722 aaPredicted RBP9.32□□□□□ -0.92
FARP1-204ENST00000427404 TRMT112Q9UI30 125 aaKnown RBP9.32□□□□□ -0.92
FARP1-204ENST00000427404 DDX60Q8IY21 1712 aaKnown RBP9.31□□□□□ -0.92
FARP1-204ENST00000427404 GLTPD2A6NH11 291 aa9.31□□□□□ -0.92
FARP1-204ENST00000427404 TWISTNBQ3B726 338 aaPredicted RBP9.31□□□□□ -0.92
FARP1-204ENST00000427404 GRIPAP1Q4V328 841 aa9.31□□□□□ -0.92
FARP1-204ENST00000427404 PHAXQ9H814 394 aaKnown RBP9.31□□□□□ -0.92
FARP1-204ENST00000427404 WDR90Q96KV7 1748 aa9.31□□□□□ -0.92
FARP1-204ENST00000427404 ZNF521Q96K83 1311 aa9.31□□□□□ -0.92
FARP1-204ENST00000427404 CACNA1FO60840 1977 aa9.3□□□□□ -0.92
FARP1-204ENST00000427404 SENP3-EIF4A1A0A087X0R7 540 aa9.3□□□□□ -0.92
FARP1-204ENST00000427404 DDX58O95786 925 aaKnown RBP9.3□□□□□ -0.92
FARP1-204ENST00000427404 RIC3Q7Z5B4 369 aa9.3□□□□□ -0.92
FARP1-204ENST00000427404 PSMD1Q99460 953 aa9.3□□□□□ -0.92
FARP1-204ENST00000427404 STK31Q9BXU1 1019 aa9.3□□□□□ -0.92
FARP1-204ENST00000427404 NMRK2Q9NPI5 230 aa9.3□□□□□ -0.92
FARP1-204ENST00000427404 ABCC4O15439 1325 aa9.3□□□□□ -0.92
FARP1-204ENST00000427404 ATP5J2-PTCD1G3V325 749 aa9.29□□□□□ -0.92
FARP1-204ENST00000427404 CCER2I3L3R5 266 aa9.29□□□□□ -0.92
FARP1-204ENST00000427404 PPEF1O14829 653 aaPredicted RBP9.29□□□□□ -0.92
FARP1-204ENST00000427404 TOMM70O94826 608 aa9.29□□□□□ -0.92
FARP1-204ENST00000427404 HCLS1P14317 486 aaPredicted RBP9.29□□□□□ -0.92
FARP1-204ENST00000427404 OLFM4Q6UX06 510 aa9.29□□□□□ -0.92
FARP1-204ENST00000427404 SYNE4Q8N205 404 aa9.29□□□□□ -0.92
FARP1-204ENST00000427404 CCDC191Q8NCU4 936 aa9.29□□□□□ -0.92
FARP1-204ENST00000427404 METTL22Q9BUU2 404 aaPredicted RBP9.29□□□□□ -0.92
FARP1-204ENST00000427404 MYH16Q9H6N6 1097 aa9.29□□□□□ -0.92
FARP1-204ENST00000427404 VAMP4O75379 141 aa9.28□□□□□ -0.92
FARP1-204ENST00000427404 BBOX1O75936 387 aa9.28□□□□□ -0.92
FARP1-204ENST00000427404 PCCAP05165 728 aaPredicted RBP9.28□□□□□ -0.92
FARP1-204ENST00000427404 HSP90B1P14625 803 aaKnown RBP9.28□□□□□ -0.92
FARP1-204ENST00000427404 GRAPQ13588 217 aa9.28□□□□□ -0.92
FARP1-204ENST00000427404 SF3B3Q15393 1217 aaKnown RBP9.28□□□□□ -0.92
FARP1-204ENST00000427404 DPY19L2Q6NUT2 758 aa9.28□□□□□ -0.92
FARP1-204ENST00000427404 KSR2Q6VAB6 950 aa9.28□□□□□ -0.92
FARP1-204ENST00000427404 TMC4Q7Z404 712 aa9.28□□□□□ -0.92
FARP1-204ENST00000427404 ZBTB38Q8NAP3 1195 aaPredicted RBP9.28□□□□□ -0.92
FARP1-204ENST00000427404 RBM46Q8TBY0 533 aaKnown RBP9.28□□□□□ -0.92
FARP1-204ENST00000427404 GRAPLQ8TC17 118 aaPredicted RBP9.28□□□□□ -0.92
FARP1-204ENST00000427404 FAM89AQ96GI7 184 aa9.28□□□□□ -0.92
FARP1-204ENST00000427404 MYD88Q99836 296 aa9.28□□□□□ -0.92
FARP1-204ENST00000427404 ZNF277Q9NRM2 450 aaPredicted RBP9.28□□□□□ -0.92
FARP1-204ENST00000427404 SALL2Q9Y467 1007 aaPredicted RBP9.28□□□□□ -0.92
FARP1-204ENST00000427404 ATP6V0A2Q9Y487 856 aa9.28□□□□□ -0.92
FARP1-204ENST00000427404 LRRC37AA6NMS7 1700 aa9.28□□□□□ -0.92
FARP1-204ENST00000427404 PI4KAP2A4QPH2 592 aa9.27□□□□□ -0.93
FARP1-204ENST00000427404 IRS4O14654 1257 aaPredicted RBP9.27□□□□□ -0.93
FARP1-204ENST00000427404 SLC4A2P04920 1241 aa9.27□□□□□ -0.93
FARP1-204ENST00000427404 VEGFAP15692 232 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms