RNA–Protein interactions for RNA: ENST00000426343.5

HDLBP-212, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-212ENST00000426343 GNAI1P63096 354 aa23.1■■□□□ 1.29
HDLBP-212ENST00000426343 FKBP4Q02790 459 aaKnown RBP eCLIP23.1■■□□□ 1.291e-6■■□□□ 12.8
HDLBP-212ENST00000426343 TCIRG1Q13488 830 aa23.1■■□□□ 1.29
HDLBP-212ENST00000426343 DUSP27Q5VZP5 1158 aa23.1■■□□□ 1.29
HDLBP-212ENST00000426343 RPGRQ92834 1020 aaKnown RBP23.1■■□□□ 1.29
HDLBP-212ENST00000426343 CHPF2Q9P2E5 772 aa23.1■■□□□ 1.29
HDLBP-212ENST00000426343 DBF4Q9UBU7 674 aaPredicted RBP23.1■■□□□ 1.29
HDLBP-212ENST00000426343 CC2D2BQ6DHV5 1058 aa23.09■■□□□ 1.29
HDLBP-212ENST00000426343 NLRP3Q96P20 1036 aa23.09■■□□□ 1.29
HDLBP-212ENST00000426343 RNF123Q5XPI4 1314 aa23.08■■□□□ 1.29
HDLBP-212ENST00000426343 CEP350Q5VT06 3117 aa23.08■■□□□ 1.29
HDLBP-212ENST00000426343 CCDC184Q52MB2 194 aa23.08■■□□□ 1.29
HDLBP-212ENST00000426343 RBM17Q96I25 401 aaKnown RBP23.08■■□□□ 1.29
HDLBP-212ENST00000426343 CRAMP1Q96RY5 1269 aa23.08■■□□□ 1.29
HDLBP-212ENST00000426343 OLFM4Q6UX06 510 aa23.07■■□□□ 1.28
HDLBP-212ENST00000426343 NLRP10Q86W26 655 aa23.07■■□□□ 1.28
HDLBP-212ENST00000426343 HYPKQ9NX55 129 aa23.07■■□□□ 1.28
HDLBP-212ENST00000426343 NUP98P52948 1817 aa23.07■■□□□ 1.28
HDLBP-212ENST00000426343 FER1L6Q2WGJ9 1857 aa23.07■■□□□ 1.28
HDLBP-212ENST00000426343 GRIPAP1Q4V328 841 aa23.06■■□□□ 1.28
HDLBP-212ENST00000426343 ANKRD13DQ6ZTN6 518 aa23.06■■□□□ 1.28
HDLBP-212ENST00000426343 PLBD2Q8NHP8 589 aa23.06■■□□□ 1.28
HDLBP-212ENST00000426343 POTECB2RU33 542 aa23.05■■□□□ 1.28
HDLBP-212ENST00000426343 C3orf67Q6ZVT6 689 aa23.05■■□□□ 1.28
HDLBP-212ENST00000426343 SYNE4Q8N205 404 aa23.05■■□□□ 1.28
HDLBP-212ENST00000426343 SMC1BQ8NDV3 1235 aa23.05■■□□□ 1.28
HDLBP-212ENST00000426343 ZNF277Q9NRM2 450 aaPredicted RBP23.05■■□□□ 1.28
HDLBP-212ENST00000426343 PSMD1Q99460 953 aa23.04■■□□□ 1.28
HDLBP-212ENST00000426343 ARFGEF2Q9Y6D5 1785 aa23.04■■□□□ 1.28
HDLBP-212ENST00000426343 ANP32CO43423 234 aa23.03■■□□□ 1.28
HDLBP-212ENST00000426343 TRMT112Q9UI30 125 aaKnown RBP23.03■■□□□ 1.28
HDLBP-212ENST00000426343 TNRC6CQ9HCJ0 1690 aaKnown RBP23.03■■□□□ 1.28
HDLBP-212ENST00000426343 CCDC27Q2M243 656 aa23.02■■□□□ 1.28
HDLBP-212ENST00000426343 CHMP4AQ9BY43 222 aa23.02■■□□□ 1.28
HDLBP-212ENST00000426343 DDNO94850 711 aaPredicted RBP23.01■■□□□ 1.27
HDLBP-212ENST00000426343 IARSP41252 1262 aaKnown RBP23.01■■□□□ 1.27
HDLBP-212ENST00000426343 NCBP3Q53F19 620 aaKnown RBP23.01■■□□□ 1.27
HDLBP-212ENST00000426343 ISCA1Q9BUE6 129 aa23.01■■□□□ 1.27
HDLBP-212ENST00000426343 SH3TC1Q8TE82 1336 aa23.01■■□□□ 1.27
HDLBP-212ENST00000426343 SNED1Q8TER0 1413 aa23■■□□□ 1.27
HDLBP-212ENST00000426343 PPEF1O14829 653 aaPredicted RBP23■■□□□ 1.27
HDLBP-212ENST00000426343 C8orf58Q8NAV2 365 aa23■■□□□ 1.27
HDLBP-212ENST00000426343 ELL2O00472 640 aaPredicted RBP22.99■■□□□ 1.27
HDLBP-212ENST00000426343 HCLS1P14317 486 aaPredicted RBP22.99■■□□□ 1.27
HDLBP-212ENST00000426343 TRIM28Q13263 835 aaKnown RBP22.99■■□□□ 1.27
HDLBP-212ENST00000426343 MRS2Q9HD23 443 aa22.99■■□□□ 1.27
HDLBP-212ENST00000426343 TIAM2Q8IVF5 1701 aa22.99■■□□□ 1.27
HDLBP-212ENST00000426343 FZD9O00144 591 aa22.98■■□□□ 1.27
HDLBP-212ENST00000426343 BBOX1O75936 387 aa22.98■■□□□ 1.27
HDLBP-212ENST00000426343 DNAJC5GQ8N7S2 189 aa22.98■■□□□ 1.27
HDLBP-212ENST00000426343 L3MBTL3Q96JM7 780 aaPredicted RBP22.98■■□□□ 1.27
HDLBP-212ENST00000426343 TMX4Q9H1E5 349 aaPredicted RBP22.98■■□□□ 1.27
HDLBP-212ENST00000426343 ATP6V0A2Q9Y487 856 aa22.98■■□□□ 1.27
HDLBP-212ENST00000426343 WDR90Q96KV7 1748 aa22.97■■□□□ 1.27
HDLBP-212ENST00000426343 IQCA1LA6NCM1 817 aa22.97■■□□□ 1.27
HDLBP-212ENST00000426343 JDP2Q8WYK2 163 aa22.97■■□□□ 1.27
HDLBP-212ENST00000426343 CCDC88AQ3V6T2 1871 aa22.96■■□□□ 1.27
HDLBP-212ENST00000426343 CCDC30Q5VVM6 783 aa22.96■■□□□ 1.27
HDLBP-212ENST00000426343 WWC1Q8IX03 1113 aa22.96■■□□□ 1.27
HDLBP-212ENST00000426343 ABCC4O15439 1325 aa22.96■■□□□ 1.27
HDLBP-212ENST00000426343 DICER1Q9UPY3 1922 aaKnown RBP22.96■■□□□ 1.27
HDLBP-212ENST00000426343 ATP5J2-PTCD1G3V325 749 aa22.95■■□□□ 1.26
HDLBP-212ENST00000426343 TCERG1O14776 1098 aaKnown RBP22.95■■□□□ 1.26
HDLBP-212ENST00000426343 GOLGA2Q08379 1002 aa22.95■■□□□ 1.26
HDLBP-212ENST00000426343 DDX46Q7L014 1031 aaKnown RBP22.95■■□□□ 1.26
HDLBP-212ENST00000426343 RIC3Q7Z5B4 369 aa22.95■■□□□ 1.26
HDLBP-212ENST00000426343 CACNA1SQ13698 1873 aa22.94■■□□□ 1.26
HDLBP-212ENST00000426343 ZNF541Q9H0D2 1346 aa22.94■■□□□ 1.26
HDLBP-212ENST00000426343 SP8Q8IXZ3 490 aa22.94■■□□□ 1.26
HDLBP-212ENST00000426343 PHAXQ9H814 394 aaKnown RBP22.94■■□□□ 1.26
HDLBP-212ENST00000426343 IL16Q14005 1332 aa22.93■■□□□ 1.26
HDLBP-212ENST00000426343 FAM89AQ96GI7 184 aa22.93■■□□□ 1.26
HDLBP-212ENST00000426343 VPS33BQ9H267 617 aa22.93■■□□□ 1.26
HDLBP-212ENST00000426343 GRAPQ13588 217 aa22.92■■□□□ 1.26
HDLBP-212ENST00000426343 SF3B3Q15393 1217 aaKnown RBP22.92■■□□□ 1.26
HDLBP-212ENST00000426343 LARGE2Q8N3Y3 721 aa22.92■■□□□ 1.26
HDLBP-212ENST00000426343 TSPYL6Q8N831 410 aa22.92■■□□□ 1.26
HDLBP-212ENST00000426343 GRAPLQ8TC17 118 aaPredicted RBP22.92■■□□□ 1.26
HDLBP-212ENST00000426343 TAF1DQ9H5J8 278 aaPredicted RBP22.92■■□□□ 1.26
HDLBP-212ENST00000426343 EIF6P56537 245 aaKnown RBP22.91■■□□□ 1.26
HDLBP-212ENST00000426343 CHADLQ6NUI6 762 aa22.91■■□□□ 1.26
HDLBP-212ENST00000426343 TMC4Q7Z404 712 aa22.91■■□□□ 1.26
HDLBP-212ENST00000426343 SLC51AQ86UW1 340 aa22.91■■□□□ 1.26
HDLBP-212ENST00000426343 GPC2Q8N158 579 aa22.91■■□□□ 1.26
HDLBP-212ENST00000426343 SUPT20HQ8NEM7 779 aa22.91■■□□□ 1.26
HDLBP-212ENST00000426343 TSR2Q969E8 191 aaKnown RBP22.91■■□□□ 1.26
HDLBP-212ENST00000426343 RTFDC1Q9BY42 306 aaPredicted RBP22.91■■□□□ 1.26
HDLBP-212ENST00000426343 DDX58O95786 925 aaKnown RBP22.9■■□□□ 1.26
HDLBP-212ENST00000426343 ZNF428Q96B54 188 aa22.9■■□□□ 1.26
HDLBP-212ENST00000426343 HACL1Q9UJ83 578 aa22.9■■□□□ 1.26
HDLBP-212ENST00000426343 HSP90B1P14625 803 aaKnown RBP22.89■■□□□ 1.25
HDLBP-212ENST00000426343 HTRA3P83110 453 aa22.89■■□□□ 1.25
HDLBP-212ENST00000426343 ZBTB38Q8NAP3 1195 aaPredicted RBP22.89■■□□□ 1.25
HDLBP-212ENST00000426343 ANKRD36CQ5JPF3 1778 aa22.89■■□□□ 1.25
HDLBP-212ENST00000426343 IRS4O14654 1257 aaPredicted RBP22.88■■□□□ 1.25
HDLBP-212ENST00000426343 DPP8Q6V1X1 898 aaPredicted RBP22.88■■□□□ 1.25
HDLBP-212ENST00000426343 LDHDQ86WU2 507 aa22.88■■□□□ 1.25
HDLBP-212ENST00000426343 NIM1KQ8IY84 436 aa22.88■■□□□ 1.25
HDLBP-212ENST00000426343 MPNDQ8N594 471 aa22.88■■□□□ 1.25
HDLBP-212ENST00000426343 CCDC191Q8NCU4 936 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 832.6 ms