RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 CHRNA5P30532 468 aa18.89■□□□□ 0.61
TMEM248-204ENST00000424964 TRIM28Q13263 835 aaKnown RBP18.89■□□□□ 0.61
TMEM248-204ENST00000424964 C2CD5Q86YS7 1000 aa18.89■□□□□ 0.61
TMEM248-204ENST00000424964 DNAAF4Q8WXU2 420 aa18.89■□□□□ 0.61
TMEM248-204ENST00000424964 TRMT112Q9UI30 125 aaKnown RBP18.89■□□□□ 0.61
TMEM248-204ENST00000424964 PXDNLA1KZ92 1463 aa18.89■□□□□ 0.61
TMEM248-204ENST00000424964 GPR162Q16538 588 aa18.88■□□□□ 0.61
TMEM248-204ENST00000424964 IBTKQ9P2D0 1353 aaPredicted RBP18.88■□□□□ 0.61
TMEM248-204ENST00000424964 ANKRD31Q8N7Z5 1873 aa18.88■□□□□ 0.61
TMEM248-204ENST00000424964 F6X3S4 739 aa18.87■□□□□ 0.61
TMEM248-204ENST00000424964 RARSP54136 660 aaKnown RBP18.87■□□□□ 0.61
TMEM248-204ENST00000424964 CCDC191Q8NCU4 936 aa18.87■□□□□ 0.61
TMEM248-204ENST00000424964 PDZRN3Q9UPQ7 1066 aa18.87■□□□□ 0.61
TMEM248-204ENST00000424964 SH3TC1Q8TE82 1336 aa18.86■□□□□ 0.61
TMEM248-204ENST00000424964 CWC25Q9NXE8 425 aaPredicted RBP18.86■□□□□ 0.61
TMEM248-204ENST00000424964 PIM2Q9P1W9 311 aa18.86■□□□□ 0.61
TMEM248-204ENST00000424964 KIAA1551Q9HCM1 1747 aa18.86■□□□□ 0.61
TMEM248-204ENST00000424964 ABCC12Q96J65 1359 aa18.85■□□□□ 0.61
TMEM248-204ENST00000424964 PTPRCP08575 1304 aa18.85■□□□□ 0.61
TMEM248-204ENST00000424964 RNF123Q5XPI4 1314 aa18.85■□□□□ 0.61
TMEM248-204ENST00000424964 IGKV5-2P06315 115 aa18.85■□□□□ 0.61
TMEM248-204ENST00000424964 KCNA3P22001 575 aa18.85■□□□□ 0.61
TMEM248-204ENST00000424964 RTL5Q5HYW3 569 aaPredicted RBP18.85■□□□□ 0.61
TMEM248-204ENST00000424964 SLC4A10Q6U841 1118 aa18.85■□□□□ 0.61
TMEM248-204ENST00000424964 SYNE4Q8N205 404 aa18.85■□□□□ 0.61
TMEM248-204ENST00000424964 ZNF622Q969S3 477 aaKnown RBP eCLIP18.85■□□□□ 0.61
TMEM248-204ENST00000424964 CWF19L2Q2TBE0 894 aaKnown RBP18.84■□□□□ 0.61
TMEM248-204ENST00000424964 FAM89AQ96GI7 184 aa18.84■□□□□ 0.61
TMEM248-204ENST00000424964 BCS1LQ9Y276 419 aa18.84■□□□□ 0.61
TMEM248-204ENST00000424964 NEURL1BA8MQ27 555 aa18.83■□□□□ 0.6
TMEM248-204ENST00000424964 HCLS1P14317 486 aaPredicted RBP18.83■□□□□ 0.6
TMEM248-204ENST00000424964 SLC10A5Q5PT55 438 aa18.83■□□□□ 0.6
TMEM248-204ENST00000424964 ZBTB38Q8NAP3 1195 aaPredicted RBP18.83■□□□□ 0.6
TMEM248-204ENST00000424964 LINS1Q8NG48 757 aa18.83■□□□□ 0.6
TMEM248-204ENST00000424964 NLRP3Q96P20 1036 aa18.83■□□□□ 0.6
TMEM248-204ENST00000424964 NOB1Q9ULX3 412 aaKnown RBP18.83■□□□□ 0.6
TMEM248-204ENST00000424964 SRGNP10124 158 aa18.82■□□□□ 0.6
TMEM248-204ENST00000424964 DALRD3Q5D0E6 543 aaKnown RBP18.82■□□□□ 0.6
TMEM248-204ENST00000424964 JARID2Q92833 1246 aaPredicted RBP18.82■□□□□ 0.6
TMEM248-204ENST00000424964 MASTLQ96GX5 879 aa18.82■□□□□ 0.6
TMEM248-204ENST00000424964 KLRG2A4D1S0 409 aaPredicted RBP18.81■□□□□ 0.6
TMEM248-204ENST00000424964 IRS4O14654 1257 aaPredicted RBP18.81■□□□□ 0.6
TMEM248-204ENST00000424964 BCAR3O75815 825 aa18.81■□□□□ 0.6
TMEM248-204ENST00000424964 PCCAP05165 728 aaPredicted RBP18.81■□□□□ 0.6
TMEM248-204ENST00000424964 NPR1P16066 1061 aa18.81■□□□□ 0.6
TMEM248-204ENST00000424964 YBX3P16989 372 aaKnown RBP eCLIP18.81■□□□□ 0.65e-9■□□□□ 9.5
TMEM248-204ENST00000424964 BRPF1P55201 1214 aaPredicted RBP18.81■□□□□ 0.6
TMEM248-204ENST00000424964 STYK1Q6J9G0 422 aa18.81■□□□□ 0.6
TMEM248-204ENST00000424964 TTLL6Q8N841 843 aa18.81■□□□□ 0.6
TMEM248-204ENST00000424964 GCKRQ14397 625 aa18.8■□□□□ 0.6
TMEM248-204ENST00000424964 BEND3Q5T5X7 828 aa18.8■□□□□ 0.6
TMEM248-204ENST00000424964 RPGRQ92834 1020 aaKnown RBP18.8■□□□□ 0.6
TMEM248-204ENST00000424964 COL11A2P13942 1736 aaPredicted RBP18.8■□□□□ 0.6
TMEM248-204ENST00000424964 BRCA1P38398 1863 aaKnown RBP18.8■□□□□ 0.6
TMEM248-204ENST00000424964 KIF16BQ96L93 1317 aa18.79■□□□□ 0.6
TMEM248-204ENST00000424964 DLEC1Q9Y238 1755 aa18.79■□□□□ 0.6
TMEM248-204ENST00000424964 GRIN3BO60391 1043 aa18.79■□□□□ 0.6
TMEM248-204ENST00000424964 HSP90B1P14625 803 aaKnown RBP18.79■□□□□ 0.6
TMEM248-204ENST00000424964 C3orf67Q6ZVT6 689 aa18.79■□□□□ 0.6
TMEM248-204ENST00000424964 CNKSR1Q969H4 720 aa18.79■□□□□ 0.6
TMEM248-204ENST00000424964 SRCIN1Q9C0H9 1055 aa18.79■□□□□ 0.6
TMEM248-204ENST00000424964 RIC1Q4ADV7 1423 aa18.79■□□□□ 0.6
TMEM248-204ENST00000424964 TNRC6CQ9HCJ0 1690 aaKnown RBP18.79■□□□□ 0.6
TMEM248-204ENST00000424964 IPO8O15397 1037 aaKnown RBP18.78■□□□□ 0.6
TMEM248-204ENST00000424964 CRY2Q49AN0 593 aa18.78■□□□□ 0.6
TMEM248-204ENST00000424964 FRAT1Q92837 279 aaPredicted RBP18.78■□□□□ 0.6
TMEM248-204ENST00000424964 API5Q9BZZ5 524 aaKnown RBP18.78■□□□□ 0.6
TMEM248-204ENST00000424964 ALDH1L1O75891 902 aa18.77■□□□□ 0.6
TMEM248-204ENST00000424964 UBE3BQ7Z3V4 1068 aa18.77■□□□□ 0.6
TMEM248-204ENST00000424964 RBM17Q96I25 401 aaKnown RBP18.77■□□□□ 0.6
TMEM248-204ENST00000424964 CACNA1SQ13698 1873 aa18.76■□□□□ 0.59
TMEM248-204ENST00000424964 H7C1W4 665 aa18.76■□□□□ 0.59
TMEM248-204ENST00000424964 ALDH1B1P30837 517 aa18.76■□□□□ 0.59
TMEM248-204ENST00000424964 ARHGAP45Q92619 1136 aa18.76■□□□□ 0.59
TMEM248-204ENST00000424964 ZNF219Q9P2Y4 722 aaPredicted RBP18.76■□□□□ 0.59
TMEM248-204ENST00000424964 DDX60Q8IY21 1712 aaKnown RBP18.75■□□□□ 0.59
TMEM248-204ENST00000424964 PDE8AO60658 829 aa18.75■□□□□ 0.59
TMEM248-204ENST00000424964 PRPF40BQ6NWY9 871 aaKnown RBP18.75■□□□□ 0.59
TMEM248-204ENST00000424964 C9orf78Q9NZ63 289 aaPredicted RBP18.75■□□□□ 0.59
TMEM248-204ENST00000424964 LAMB2P55268 1798 aa18.75■□□□□ 0.59
TMEM248-204ENST00000424964 CDHR2Q9BYE9 1310 aa18.74■□□□□ 0.59
TMEM248-204ENST00000424964 HOXA10P31260 410 aaPredicted RBP18.74■□□□□ 0.59
TMEM248-204ENST00000424964 ARHGAP27Q6ZUM4 889 aa18.74■□□□□ 0.59
TMEM248-204ENST00000424964 DDX46Q7L014 1031 aaKnown RBP18.74■□□□□ 0.59
TMEM248-204ENST00000424964 CRAMP1Q96RY5 1269 aa18.74■□□□□ 0.59
TMEM248-204ENST00000424964 SLX4Q8IY92 1834 aa18.74■□□□□ 0.59
TMEM248-204ENST00000424964 ARFGEF1Q9Y6D6 1849 aa18.74■□□□□ 0.59
TMEM248-204ENST00000424964 GRM8O00222 908 aa18.73■□□□□ 0.59
TMEM248-204ENST00000424964 C21orf2O43822 256 aa18.73■□□□□ 0.59
TMEM248-204ENST00000424964 SF3B3Q15393 1217 aaKnown RBP18.73■□□□□ 0.59
TMEM248-204ENST00000424964 RCAN3Q9UKA8 241 aa18.73■□□□□ 0.59
TMEM248-204ENST00000424964 CCT4P50991 539 aaKnown RBP18.72■□□□□ 0.59
TMEM248-204ENST00000424964 ZKSCAN2Q63HK3 967 aa18.72■□□□□ 0.59
TMEM248-204ENST00000424964 ATF7IPQ6VMQ6 1270 aa18.72■□□□□ 0.59
TMEM248-204ENST00000424964 TRIM27P14373 513 aa18.71■□□□□ 0.59
TMEM248-204ENST00000424964 CASP7P55210 303 aa18.71■□□□□ 0.59
TMEM248-204ENST00000424964 CTSWP56202 376 aa18.71■□□□□ 0.59
TMEM248-204ENST00000424964 CCDC152Q4G0S7 254 aa18.71■□□□□ 0.59
TMEM248-204ENST00000424964 CCDC85AQ96PX6 553 aaPredicted RBP18.71■□□□□ 0.59
TMEM248-204ENST00000424964 GOLGB1Q14789 3259 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms