RNA–Protein interactions for RNA: ENST00000424362.5

BRPF1-203, Transcript of bromodomain and PHD finger containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRPF1, Length 4,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-203ENST00000424362 SOGA3Q5TF21 947 aa20.31■□□□□ 0.84
BRPF1-203ENST00000424362 IQCEQ6IPM2 695 aa20.31■□□□□ 0.84
BRPF1-203ENST00000424362 ABCF2Q9UG63 623 aa20.31■□□□□ 0.84
BRPF1-203ENST00000424362 MSH6P52701 1360 aa20.31■□□□□ 0.84
BRPF1-203ENST00000424362 ATP5J2-PTCD1G3V325 749 aa20.31■□□□□ 0.84
BRPF1-203ENST00000424362 POLR3DP05423 398 aaPredicted RBP20.31■□□□□ 0.84
BRPF1-203ENST00000424362 KRT18P05783 430 aaKnown RBP20.31■□□□□ 0.84
BRPF1-203ENST00000424362 KSR2Q6VAB6 950 aa20.31■□□□□ 0.84
BRPF1-203ENST00000424362 DDX46Q7L014 1031 aaKnown RBP20.31■□□□□ 0.84
BRPF1-203ENST00000424362 SLC12A7Q9Y666 1083 aa20.31■□□□□ 0.84
BRPF1-203ENST00000424362 KIF4BQ2VIQ3 1234 aa20.3■□□□□ 0.84
BRPF1-203ENST00000424362 CCDC150Q8NCX0 1101 aa20.3■□□□□ 0.84
BRPF1-203ENST00000424362 FLT4P35916 1363 aa20.3■□□□□ 0.84
BRPF1-203ENST00000424362 ARHGEF5Q12774 1597 aa20.3■□□□□ 0.84
BRPF1-203ENST00000424362 IGHMBP2P38935 993 aaKnown RBP20.3■□□□□ 0.84
BRPF1-203ENST00000424362 TYRO3Q06418 890 aa20.3■□□□□ 0.84
BRPF1-203ENST00000424362 GOLGA8AA7E2F4 631 aa20.3■□□□□ 0.84
BRPF1-203ENST00000424362 PATL2C9JE40 543 aaKnown RBP20.3■□□□□ 0.84
BRPF1-203ENST00000424362 SYT1P21579 422 aa20.3■□□□□ 0.84
BRPF1-203ENST00000424362 CASQ1P31415 396 aa20.3■□□□□ 0.84
BRPF1-203ENST00000424362 ANKRD13DQ6ZTN6 518 aa20.3■□□□□ 0.84
BRPF1-203ENST00000424362 MAP3K12Q12852 859 aa20.29■□□□□ 0.84
BRPF1-203ENST00000424362 CTDP1Q9Y5B0 961 aaPredicted RBP20.29■□□□□ 0.84
BRPF1-203ENST00000424362 KDM6BO15054 1643 aa20.29■□□□□ 0.84
BRPF1-203ENST00000424362 SKIDA1Q1XH10 827 aa20.29■□□□□ 0.84
BRPF1-203ENST00000424362 TSPYL1Q9H0U9 437 aa20.29■□□□□ 0.84
BRPF1-203ENST00000424362 ZNF521Q96K83 1311 aa20.29■□□□□ 0.84
BRPF1-203ENST00000424362 KIAA1328Q86T90 577 aa20.29■□□□□ 0.84
BRPF1-203ENST00000424362 CCDC82Q8N4S0 544 aa20.29■□□□□ 0.84
BRPF1-203ENST00000424362 KDM5CP41229 1560 aa20.29■□□□□ 0.84
BRPF1-203ENST00000424362 IFIT3O14879 490 aaKnown RBP20.29■□□□□ 0.84
BRPF1-203ENST00000424362 PPFIA3O75145 1194 aa20.29■□□□□ 0.84
BRPF1-203ENST00000424362 SKILP12757 684 aa20.29■□□□□ 0.84
BRPF1-203ENST00000424362 SNRKQ9NRH2 765 aa20.29■□□□□ 0.84
BRPF1-203ENST00000424362 ATP7AQ04656 1500 aa20.28■□□□□ 0.84
BRPF1-203ENST00000424362 SPDYE4A6NLX3 237 aa20.28■□□□□ 0.84
BRPF1-203ENST00000424362 IARSP41252 1262 aaKnown RBP20.28■□□□□ 0.84
BRPF1-203ENST00000424362 HAND2P61296 217 aa20.28■□□□□ 0.84
BRPF1-203ENST00000424362 TANGO6Q9C0B7 1094 aa20.28■□□□□ 0.84
BRPF1-203ENST00000424362 DNAJC25Q9H1X3 360 aa20.28■□□□□ 0.84
BRPF1-203ENST00000424362 TARBP1Q13395 1621 aaKnown RBP20.28■□□□□ 0.84
BRPF1-203ENST00000424362 IL13P35225 146 aa20.28■□□□□ 0.84
BRPF1-203ENST00000424362 CCDC148Q8NFR7 591 aa20.28■□□□□ 0.84
BRPF1-203ENST00000424362 LINS1Q8NG48 757 aa20.28■□□□□ 0.84
BRPF1-203ENST00000424362 YTHDC2Q9H6S0 1430 aaKnown RBP20.28■□□□□ 0.84
BRPF1-203ENST00000424362 IKQ13123 557 aaPredicted RBP20.28■□□□□ 0.84
BRPF1-203ENST00000424362 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.28■□□□□ 0.84
BRPF1-203ENST00000424362 MAGI2Q86UL8 1455 aa20.28■□□□□ 0.84
BRPF1-203ENST00000424362 IFNL2Q8IZJ0 200 aa20.28■□□□□ 0.84
BRPF1-203ENST00000424362 LRRC2Q9BYS8 371 aa20.28■□□□□ 0.84
BRPF1-203ENST00000424362 MINDY4BA8MYZ0 360 aa20.27■□□□□ 0.84
BRPF1-203ENST00000424362 NCOA7Q8NI08 942 aa20.27■□□□□ 0.84
BRPF1-203ENST00000424362 PHAXQ9H814 394 aaKnown RBP20.27■□□□□ 0.84
BRPF1-203ENST00000424362 GOLGA6L9A6NEM1 432 aa20.27■□□□□ 0.84
BRPF1-203ENST00000424362 SSRP1Q08945 709 aaKnown RBP20.27■□□□□ 0.84
BRPF1-203ENST00000424362 NMIQ13287 307 aaPredicted RBP20.27■□□□□ 0.84
BRPF1-203ENST00000424362 CCDC102BQ68D86 513 aa20.27■□□□□ 0.84
BRPF1-203ENST00000424362 ZBTB3Q9H5J0 574 aa20.27■□□□□ 0.84
BRPF1-203ENST00000424362 CWC25Q9NXE8 425 aaPredicted RBP20.27■□□□□ 0.84
BRPF1-203ENST00000424362 SNRPA1P09661 255 aaKnown RBP20.27■□□□□ 0.84
BRPF1-203ENST00000424362 G2E3Q7L622 706 aa20.27■□□□□ 0.84
BRPF1-203ENST00000424362 PA2G4Q9UQ80 394 aaKnown RBP20.27■□□□□ 0.84
BRPF1-203ENST00000424362 MCMDC2Q4G0Z9 681 aa20.26■□□□□ 0.83
BRPF1-203ENST00000424362 JAKMIP3Q5VZ66 844 aa20.26■□□□□ 0.83
BRPF1-203ENST00000424362 MRPS27Q92552 414 aaKnown RBP20.26■□□□□ 0.83
BRPF1-203ENST00000424362 GOLGA6L10A6NI86 522 aa20.26■□□□□ 0.83
BRPF1-203ENST00000424362 CHL1O00533 1208 aa20.26■□□□□ 0.83
BRPF1-203ENST00000424362 CREB3L3Q68CJ9 461 aa20.26■□□□□ 0.83
BRPF1-203ENST00000424362 KCNG4Q8TDN1 519 aa20.26■□□□□ 0.83
BRPF1-203ENST00000424362 PIBF1Q8WXW3 757 aa20.26■□□□□ 0.83
BRPF1-203ENST00000424362 Q6ZUG5 572 aa20.25■□□□□ 0.83
BRPF1-203ENST00000424362 EYA1Q99502 592 aa20.25■□□□□ 0.83
BRPF1-203ENST00000424362 RNF41Q9H4P4 317 aaPredicted RBP20.25■□□□□ 0.83
BRPF1-203ENST00000424362 BMS1Q14692 1282 aaKnown RBP20.25■□□□□ 0.83
BRPF1-203ENST00000424362 ANKRD24Q8TF21 1146 aa20.25■□□□□ 0.83
BRPF1-203ENST00000424362 MBD5Q9P267 1494 aa20.25■□□□□ 0.83
BRPF1-203ENST00000424362 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
BRPF1-203ENST00000424362 JARID2Q92833 1246 aaPredicted RBP20.25■□□□□ 0.83
BRPF1-203ENST00000424362 MICU3Q86XE3 530 aa20.25■□□□□ 0.83
BRPF1-203ENST00000424362 XAGE3Q8WTP9 111 aa20.25■□□□□ 0.83
BRPF1-203ENST00000424362 CRACR2AQ9BSW2 395 aa20.25■□□□□ 0.83
BRPF1-203ENST00000424362 BMP2KQ9NSY1 1161 aaPredicted RBP20.25■□□□□ 0.83
BRPF1-203ENST00000424362 TMOD3Q9NYL9 352 aa20.25■□□□□ 0.83
BRPF1-203ENST00000424362 KLF18A0A0U1RQI7 1052 aa20.24■□□□□ 0.83
BRPF1-203ENST00000424362 SAMD1Q6SPF0 538 aaPredicted RBP20.24■□□□□ 0.83
BRPF1-203ENST00000424362 LMBRD1Q9NUN5 540 aa20.24■□□□□ 0.83
BRPF1-203ENST00000424362 AKAP4Q5JQC9 854 aa20.24■□□□□ 0.83
BRPF1-203ENST00000424362 METAP2P50579 478 aaKnown RBP eCLIP20.24■□□□□ 0.83
BRPF1-203ENST00000424362 HSP90AB3PQ58FF7 597 aa20.24■□□□□ 0.83
BRPF1-203ENST00000424362 COPS6Q7L5N1 327 aa20.24■□□□□ 0.83
BRPF1-203ENST00000424362 CTCFLQ8NI51 663 aaPredicted RBP20.24■□□□□ 0.83
BRPF1-203ENST00000424362 CALCOCO1Q9P1Z2 691 aa20.24■□□□□ 0.83
BRPF1-203ENST00000424362 KIAA0754O94854 1291 aa20.24■□□□□ 0.83
BRPF1-203ENST00000424362 SYKP43405 635 aa20.24■□□□□ 0.83
BRPF1-203ENST00000424362 ISM2Q6H9L7 571 aa20.24■□□□□ 0.83
BRPF1-203ENST00000424362 SBNO2Q9Y2G9 1366 aa20.24■□□□□ 0.83
BRPF1-203ENST00000424362 ANKRD18BA2A2Z9 1011 aa20.23■□□□□ 0.83
BRPF1-203ENST00000424362 FAM193AP78312 1265 aa20.23■□□□□ 0.83
BRPF1-203ENST00000424362 RUFY3Q7L099 469 aa20.23■□□□□ 0.83
BRPF1-203ENST00000424362 IQCA1Q86XH1 822 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms