RNA–Protein interactions for RNA: ENST00000423479.7

CTCFL-205, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-205ENST00000423479 NECAB1Q8N987 351 aa16.8■□□□□ 0.28
CTCFL-205ENST00000423479 PDCP20941 246 aa16.79■□□□□ 0.28
CTCFL-205ENST00000423479 CACTINQ8WUQ7 758 aaKnown RBP16.79■□□□□ 0.28
CTCFL-205ENST00000423479 ZNF592Q92610 1267 aa16.79■□□□□ 0.28
CTCFL-205ENST00000423479 SCAND2PQ9GZW5 306 aaPredicted RBP16.79■□□□□ 0.28
CTCFL-205ENST00000423479 ZNF165P49910 485 aa16.79■□□□□ 0.28
CTCFL-205ENST00000423479 FAM173BQ6P4H8 233 aa16.79■□□□□ 0.28
CTCFL-205ENST00000423479 CDC37L1Q7L3B6 337 aa16.79■□□□□ 0.28
CTCFL-205ENST00000423479 NGDNQ8NEJ9 315 aaKnown RBP16.79■□□□□ 0.28
CTCFL-205ENST00000423479 TTC21AQ8NDW8 1320 aa16.78■□□□□ 0.28
CTCFL-205ENST00000423479 PEAK1Q9H792 1746 aa16.78■□□□□ 0.28
CTCFL-205ENST00000423479 PTH1RQ03431 593 aa16.78■□□□□ 0.28
CTCFL-205ENST00000423479 POLA2Q14181 598 aa16.78■□□□□ 0.28
CTCFL-205ENST00000423479 KRT222Q8N1A0 295 aa16.78■□□□□ 0.28
CTCFL-205ENST00000423479 BBXQ8WY36 941 aaPredicted RBP16.78■□□□□ 0.28
CTCFL-205ENST00000423479 MAP3K19Q56UN5 1328 aa16.78■□□□□ 0.28
CTCFL-205ENST00000423479 NPHP3Q7Z494 1330 aa16.78■□□□□ 0.28
CTCFL-205ENST00000423479 SRGAP3O43295 1099 aa16.78■□□□□ 0.28
CTCFL-205ENST00000423479 ZKSCAN1P17029 563 aaPredicted RBP16.78■□□□□ 0.28
CTCFL-205ENST00000423479 RBM43Q6ZSC3 357 aaKnown RBP16.78■□□□□ 0.28
CTCFL-205ENST00000423479 C14orf37Q86TY3 774 aa16.78■□□□□ 0.28
CTCFL-205ENST00000423479 SPATA32Q96LK8 384 aa16.78■□□□□ 0.28
CTCFL-205ENST00000423479 CLSTN2Q9H4D0 955 aa16.78■□□□□ 0.28
CTCFL-205ENST00000423479 SOX12O15370 315 aa16.77■□□□□ 0.28
CTCFL-205ENST00000423479 TERF2Q15554 542 aa16.77■□□□□ 0.28
CTCFL-205ENST00000423479 ZNF397Q8NF99 534 aaPredicted RBP16.77■□□□□ 0.28
CTCFL-205ENST00000423479 RGPD1P0DJD0 1748 aa16.77■□□□□ 0.27
CTCFL-205ENST00000423479 OVOS2A0A0J9YW53 1432 aa16.77■□□□□ 0.27
CTCFL-205ENST00000423479 OVOS2Q6IE36 1432 aa16.77■□□□□ 0.27
CTCFL-205ENST00000423479 GLRX3O76003 335 aaKnown RBP16.77■□□□□ 0.27
CTCFL-205ENST00000423479 KCNB2Q92953 911 aa16.77■□□□□ 0.27
CTCFL-205ENST00000423479 TPCN1Q9ULQ1 816 aa16.77■□□□□ 0.27
CTCFL-205ENST00000423479 MAP3K5Q99683 1374 aa16.77■□□□□ 0.27
CTCFL-205ENST00000423479 KDM4FA0A1W2PPD8 638 aa16.76■□□□□ 0.27
CTCFL-205ENST00000423479 CDC25BP30305 580 aa16.76■□□□□ 0.27
CTCFL-205ENST00000423479 HSPA2P54652 639 aa16.76■□□□□ 0.27
CTCFL-205ENST00000423479 CCDC144BQ3MJ40 725 aa16.76■□□□□ 0.27
CTCFL-205ENST00000423479 CCDC144CPQ8IYA2 1237 aa16.76■□□□□ 0.27
CTCFL-205ENST00000423479 DNAJC25Q9H1X3 360 aa16.76■□□□□ 0.27
CTCFL-205ENST00000423479 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
CTCFL-205ENST00000423479 TTC41PQ6P2S7 1318 aa16.76■□□□□ 0.27
CTCFL-205ENST00000423479 CAVIN2O95810 425 aa16.75■□□□□ 0.27
CTCFL-205ENST00000423479 LRRC8AQ8IWT6 810 aa16.75■□□□□ 0.27
CTCFL-205ENST00000423479 DDX54Q8TDD1 881 aaKnown RBP16.75■□□□□ 0.27
CTCFL-205ENST00000423479 TFIP11Q9UBB9 837 aaKnown RBP16.75■□□□□ 0.27
CTCFL-205ENST00000423479 PIK3C2AO00443 1686 aa16.75■□□□□ 0.27
CTCFL-205ENST00000423479 CCDC66A2RUB6 948 aa16.75■□□□□ 0.27
CTCFL-205ENST00000423479 NECTIN1Q15223 517 aa16.75■□□□□ 0.27
CTCFL-205ENST00000423479 PTPN14Q15678 1187 aa16.75■□□□□ 0.27
CTCFL-205ENST00000423479 KMT5BQ4FZB7 885 aa16.75■□□□□ 0.27
CTCFL-205ENST00000423479 HSP90AB4PQ58FF6 505 aa16.75■□□□□ 0.27
CTCFL-205ENST00000423479 LEO1Q8WVC0 666 aaPredicted RBP16.75■□□□□ 0.27
CTCFL-205ENST00000423479 USP42Q9H9J4 1324 aaKnown RBP16.75■□□□□ 0.27
CTCFL-205ENST00000423479 NEMFO60524 1076 aa16.74■□□□□ 0.27
CTCFL-205ENST00000423479 NR1I2O75469 434 aa16.74■□□□□ 0.27
CTCFL-205ENST00000423479 BCL11BQ9C0K0 894 aaPredicted RBP16.74■□□□□ 0.27
CTCFL-205ENST00000423479 ZNF215Q9UL58 517 aaPredicted RBP16.74■□□□□ 0.27
CTCFL-205ENST00000423479 GOLGA6L19H0YKK7 550 aa16.74■□□□□ 0.27
CTCFL-205ENST00000423479 GTF2E1P29083 439 aaPredicted RBP16.74■□□□□ 0.27
CTCFL-205ENST00000423479 BICD2Q8TD16 824 aa16.74■□□□□ 0.27
CTCFL-205ENST00000423479 STRCP1A6NGW2 1772 aa16.73■□□□□ 0.27
CTCFL-205ENST00000423479 FAM208AQ9UK61 1670 aaKnown RBP16.73■□□□□ 0.27
CTCFL-205ENST00000423479 KCNJ4P48050 445 aa16.73■□□□□ 0.27
CTCFL-205ENST00000423479 RBM6P78332 1123 aaKnown RBP16.73■□□□□ 0.27
CTCFL-205ENST00000423479 TMEM51Q9NW97 253 aa16.73■□□□□ 0.27
CTCFL-205ENST00000423479 LMTK3Q96Q04 1460 aa16.73■□□□□ 0.27
CTCFL-205ENST00000423479 HTATSF1O43719 755 aaKnown RBP16.73■□□□□ 0.27
CTCFL-205ENST00000423479 PSMA5P28066 241 aa16.73■□□□□ 0.27
CTCFL-205ENST00000423479 OS9Q13438 667 aaPredicted RBP16.72■□□□□ 0.27
CTCFL-205ENST00000423479 CREB3L3Q68CJ9 461 aa16.72■□□□□ 0.27
CTCFL-205ENST00000423479 PROSER2Q86WR7 435 aaPredicted RBP16.72■□□□□ 0.27
CTCFL-205ENST00000423479 RBM8AQ9Y5S9 174 aaKnown RBP16.72■□□□□ 0.27
CTCFL-205ENST00000423479 USP27XA6NNY8 438 aa16.72■□□□□ 0.27
CTCFL-205ENST00000423479 ANKRD1Q15327 319 aa16.72■□□□□ 0.27
CTCFL-205ENST00000423479 SARM1Q6SZW1 724 aa16.72■□□□□ 0.27
CTCFL-205ENST00000423479 NYAP1Q6ZVC0 841 aa16.72■□□□□ 0.27
CTCFL-205ENST00000423479 ERO1AQ96HE7 468 aa16.72■□□□□ 0.27
CTCFL-205ENST00000423479 SKILP12757 684 aa16.71■□□□□ 0.27
CTCFL-205ENST00000423479 LARP1Q6PKG0 1096 aaKnown RBP16.71■□□□□ 0.27
CTCFL-205ENST00000423479 CLASRPQ8N2M8 674 aaKnown RBP16.71■□□□□ 0.27
CTCFL-205ENST00000423479 MRFAP1L1Q96HT8 127 aa16.71■□□□□ 0.27
CTCFL-205ENST00000423479 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.27
CTCFL-205ENST00000423479 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.71■□□□□ 0.27
CTCFL-205ENST00000423479 PHF8Q9UPP1 1060 aa16.71■□□□□ 0.27
CTCFL-205ENST00000423479 V9GYY5 206 aaPredicted RBP16.71■□□□□ 0.27
CTCFL-205ENST00000423479 NBPF7P0C2Y1 421 aaPredicted RBP16.71■□□□□ 0.26
CTCFL-205ENST00000423479 FAM53CQ9NYF3 392 aa16.71■□□□□ 0.26
CTCFL-205ENST00000423479 HDGFL1Q5TGJ6 251 aa16.7■□□□□ 0.26
CTCFL-205ENST00000423479 FBXO38Q6PIJ6 1188 aa16.7■□□□□ 0.26
CTCFL-205ENST00000423479 PGBD1Q96JS3 809 aa16.7■□□□□ 0.26
CTCFL-205ENST00000423479 ECHDC1Q9NTX5 307 aa16.7■□□□□ 0.26
CTCFL-205ENST00000423479 CRYBG1Q9Y4K1 1723 aa16.7■□□□□ 0.26
CTCFL-205ENST00000423479 KDRP35968 1356 aa16.7■□□□□ 0.26
CTCFL-205ENST00000423479 GNAT3A8MTJ3 354 aa16.7■□□□□ 0.26
CTCFL-205ENST00000423479 ARID5BQ14865 1188 aa16.7■□□□□ 0.26
CTCFL-205ENST00000423479 IQCB1Q15051 598 aa16.7■□□□□ 0.26
CTCFL-205ENST00000423479 SLFNL1Q499Z3 407 aa16.7■□□□□ 0.26
CTCFL-205ENST00000423479 EVI5LQ96CN4 794 aa16.7■□□□□ 0.26
CTCFL-205ENST00000423479 GPATCH3Q96I76 525 aa16.7■□□□□ 0.26
CTCFL-205ENST00000423479 MARF1Q9Y4F3 1742 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms