RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 NTSR2O95665 410 aa21.17■□□□□ 0.98
COL18A1-205ENST00000423214 TMPOP42166 694 aaKnown RBP21.17■□□□□ 0.98
COL18A1-205ENST00000423214 EAPPQ56P03 285 aaPredicted RBP21.17■□□□□ 0.98
COL18A1-205ENST00000423214 CC2D2BQ6DHV5 1058 aa21.17■□□□□ 0.98
COL18A1-205ENST00000423214 ZNF34Q8IZ26 560 aa21.17■□□□□ 0.98
COL18A1-205ENST00000423214 JDP2Q8WYK2 163 aa21.17■□□□□ 0.98
COL18A1-205ENST00000423214 RBM17Q96I25 401 aaKnown RBP21.17■□□□□ 0.98
COL18A1-205ENST00000423214 TAF1DQ9H5J8 278 aaPredicted RBP21.17■□□□□ 0.98
COL18A1-205ENST00000423214 CREBZFQ9NS37 354 aa21.17■□□□□ 0.98
COL18A1-205ENST00000423214 BABAM1Q9NWV8 329 aa21.17■□□□□ 0.98
COL18A1-205ENST00000423214 HACL1Q9UJ83 578 aa21.17■□□□□ 0.98
COL18A1-205ENST00000423214 TAF1P21675 1872 aa21.15■□□□□ 0.98
COL18A1-205ENST00000423214 COL4A5P29400 1685 aa21.15■□□□□ 0.98
COL18A1-205ENST00000423214 RNF123Q5XPI4 1314 aa21.15■□□□□ 0.98
COL18A1-205ENST00000423214 PPEF1O14829 653 aaPredicted RBP21.15■□□□□ 0.98
COL18A1-205ENST00000423214 WDR43Q15061 677 aaKnown RBP eCLIP21.15■□□□□ 0.989e-7■■■□□ 16.4
COL18A1-205ENST00000423214 TRPM7Q96QT4 1865 aa21.15■□□□□ 0.98
COL18A1-205ENST00000423214 DDX60Q8IY21 1712 aaKnown RBP21.15■□□□□ 0.98
COL18A1-205ENST00000423214 HSPA1AP0DMV8 641 aaKnown RBP21.14■□□□□ 0.97
COL18A1-205ENST00000423214 HSPA1BP0DMV9 641 aaKnown RBP21.14■□□□□ 0.97
COL18A1-205ENST00000423214 HOXA10P31260 410 aaPredicted RBP21.14■□□□□ 0.97
COL18A1-205ENST00000423214 NEUROD2Q15784 382 aa21.14■□□□□ 0.97
COL18A1-205ENST00000423214 GRIPAP1Q4V328 841 aa21.14■□□□□ 0.97
COL18A1-205ENST00000423214 CCDC146Q8IYE0 955 aa21.14■□□□□ 0.97
COL18A1-205ENST00000423214 TMX4Q9H1E5 349 aaPredicted RBP21.14■□□□□ 0.97
COL18A1-205ENST00000423214 LTBP1Q14766 1721 aa21.13■□□□□ 0.97
COL18A1-205ENST00000423214 FZD9O00144 591 aa21.13■□□□□ 0.97
COL18A1-205ENST00000423214 ANXA1P04083 346 aa21.13■□□□□ 0.97
COL18A1-205ENST00000423214 EPHX2P34913 555 aa21.13■□□□□ 0.97
COL18A1-205ENST00000423214 EIF6P56537 245 aaKnown RBP21.13■□□□□ 0.97
COL18A1-205ENST00000423214 DDX10Q13206 875 aaKnown RBP21.13■□□□□ 0.97
COL18A1-205ENST00000423214 GPC2Q8N158 579 aa21.13■□□□□ 0.97
COL18A1-205ENST00000423214 NECTIN2Q92692 538 aa21.13■□□□□ 0.97
COL18A1-205ENST00000423214 CRAMP1Q96RY5 1269 aa21.13■□□□□ 0.97
COL18A1-205ENST00000423214 CLEC11AQ9Y240 323 aa21.13■□□□□ 0.97
COL18A1-205ENST00000423214 TCERG1O14776 1098 aaKnown RBP21.12■□□□□ 0.97
COL18A1-205ENST00000423214 PDIA6Q15084 440 aa21.12■□□□□ 0.97
COL18A1-205ENST00000423214 PROSER3Q2NL68 480 aa21.12■□□□□ 0.97
COL18A1-205ENST00000423214 HSP90AB3PQ58FF7 597 aa21.12■□□□□ 0.97
COL18A1-205ENST00000423214 LRP10Q7Z4F1 713 aa21.12■□□□□ 0.97
COL18A1-205ENST00000423214 LARGE2Q8N3Y3 721 aa21.12■□□□□ 0.97
COL18A1-205ENST00000423214 NLRP3Q96P20 1036 aa21.12■□□□□ 0.97
COL18A1-205ENST00000423214 UTP14AQ9BVJ6 771 aaKnown RBP21.12■□□□□ 0.97
COL18A1-205ENST00000423214 MKRN1Q9UHC7 482 aaKnown RBP21.12■□□□□ 0.97
COL18A1-205ENST00000423214 AIMP1Q12904 312 aaKnown RBP21.11■□□□□ 0.97
COL18A1-205ENST00000423214 COL13A1Q5TAT6 717 aaPredicted RBP21.11■□□□□ 0.97
COL18A1-205ENST00000423214 PNMA8AQ86V59 439 aaPredicted RBP21.11■□□□□ 0.97
COL18A1-205ENST00000423214 LAS1LQ9Y4W2 734 aaKnown RBP21.11■□□□□ 0.97
COL18A1-205ENST00000423214 PASKQ96RG2 1323 aa21.1■□□□□ 0.97
COL18A1-205ENST00000423214 LRRC37AA6NMS7 1700 aa21.1■□□□□ 0.97
COL18A1-205ENST00000423214 LMOD1P29536 600 aaPredicted RBP21.1■□□□□ 0.97
COL18A1-205ENST00000423214 GJA3Q9Y6H8 435 aa21.1■□□□□ 0.97
COL18A1-205ENST00000423214 C3orf67Q6ZVT6 689 aa21.09■□□□□ 0.97
COL18A1-205ENST00000423214 XAGE3Q8WTP9 111 aa21.09■□□□□ 0.97
COL18A1-205ENST00000423214 RUNDC1Q96C34 613 aa21.09■□□□□ 0.97
COL18A1-205ENST00000423214 CNTNAP1P78357 1384 aa21.09■□□□□ 0.97
COL18A1-205ENST00000423214 ABCC4O15439 1325 aa21.08■□□□□ 0.97
COL18A1-205ENST00000423214 COPS6Q7L5N1 327 aa21.08■□□□□ 0.97
COL18A1-205ENST00000423214 NIM1KQ8IY84 436 aa21.08■□□□□ 0.97
COL18A1-205ENST00000423214 PPIP5K2O43314 1243 aa21.07■□□□□ 0.96
COL18A1-205ENST00000423214 TNS4Q8IZW8 715 aa21.07■□□□□ 0.96
COL18A1-205ENST00000423214 DDX21Q9NR30 783 aaKnown RBP eCLIP21.07■□□□□ 0.96
COL18A1-205ENST00000423214 TMEM88BA6NKF7 163 aa21.06■□□□□ 0.96
COL18A1-205ENST00000423214 KRT24Q2M2I5 525 aa21.06■□□□□ 0.96
COL18A1-205ENST00000423214 SLC51AQ86UW1 340 aa21.06■□□□□ 0.96
COL18A1-205ENST00000423214 CHL1O00533 1208 aa21.05■□□□□ 0.96
COL18A1-205ENST00000423214 HDGFL1Q5TGJ6 251 aa21.05■□□□□ 0.96
COL18A1-205ENST00000423214 NLRP10Q86W26 655 aa21.05■□□□□ 0.96
COL18A1-205ENST00000423214 CHPF2Q9P2E5 772 aa21.05■□□□□ 0.96
COL18A1-205ENST00000423214 TRMT112Q9UI30 125 aaKnown RBP21.05■□□□□ 0.96
COL18A1-205ENST00000423214 ATP6V0A2Q9Y487 856 aa21.05■□□□□ 0.96
COL18A1-205ENST00000423214 SH3TC1Q8TE82 1336 aa21.04■□□□□ 0.96
COL18A1-205ENST00000423214 ITGBL1O95965 494 aaPredicted RBP21.04■□□□□ 0.96
COL18A1-205ENST00000423214 AOC3Q16853 763 aa21.04■□□□□ 0.96
COL18A1-205ENST00000423214 SLC10A5Q5PT55 438 aa21.04■□□□□ 0.96
COL18A1-205ENST00000423214 MAP1SQ66K74 1059 aaPredicted RBP21.04■□□□□ 0.96
COL18A1-205ENST00000423214 SUPT20HQ8NEM7 779 aa21.04■□□□□ 0.96
COL18A1-205ENST00000423214 TRIM35Q9UPQ4 493 aa21.04■□□□□ 0.96
COL18A1-205ENST00000423214 HCLS1P14317 486 aaPredicted RBP21.03■□□□□ 0.96
COL18A1-205ENST00000423214 TCIRG1Q13488 830 aa21.03■□□□□ 0.96
COL18A1-205ENST00000423214 DDX46Q7L014 1031 aaKnown RBP21.03■□□□□ 0.96
COL18A1-205ENST00000423214 CNTROBQ8N137 903 aa21.03■□□□□ 0.96
COL18A1-205ENST00000423214 HOXB7P09629 217 aa21.02■□□□□ 0.96
COL18A1-205ENST00000423214 DPP8Q6V1X1 898 aaPredicted RBP21.02■□□□□ 0.96
COL18A1-205ENST00000423214 VPS33BQ9H267 617 aa21.02■□□□□ 0.96
COL18A1-205ENST00000423214 DUOX1Q9NRD9 1551 aa21.02■□□□□ 0.95
COL18A1-205ENST00000423214 SCNN1DP51172 638 aa21.01■□□□□ 0.95
COL18A1-205ENST00000423214 ADAMTS8Q9UP79 889 aa21.01■□□□□ 0.95
COL18A1-205ENST00000423214 CAPN15O75808 1086 aa21■□□□□ 0.95
COL18A1-205ENST00000423214 BBOX1O75936 387 aa21■□□□□ 0.95
COL18A1-205ENST00000423214 GRAPQ13588 217 aa21■□□□□ 0.95
COL18A1-205ENST00000423214 PLBD2Q8NHP8 589 aa21■□□□□ 0.95
COL18A1-205ENST00000423214 GRAPLQ8TC17 118 aaPredicted RBP21■□□□□ 0.95
COL18A1-205ENST00000423214 DBF4Q9UBU7 674 aaPredicted RBP21■□□□□ 0.95
COL18A1-205ENST00000423214 THSD7BQ9C0I4 1608 aa21■□□□□ 0.95
COL18A1-205ENST00000423214 EPS15P42566 896 aa20.99■□□□□ 0.95
COL18A1-205ENST00000423214 SP8Q8IXZ3 490 aa20.99■□□□□ 0.95
COL18A1-205ENST00000423214 MPNDQ8N594 471 aa20.99■□□□□ 0.95
COL18A1-205ENST00000423214 AIDAQ96BJ3 306 aa20.99■□□□□ 0.95
COL18A1-205ENST00000423214 ABT1Q9ULW3 272 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms