RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 PDZRN3Q9UPQ7 1066 aa23.74■■□□□ 1.39
DDR1-233ENST00000421124 RNF123Q5XPI4 1314 aa23.74■■□□□ 1.39
DDR1-233ENST00000421124 TNRC6CQ9HCJ0 1690 aaKnown RBP23.73■■□□□ 1.39
DDR1-233ENST00000421124 KCNA3P22001 575 aa23.73■■□□□ 1.39
DDR1-233ENST00000421124 ERFEQ4G0M1 354 aa23.73■■□□□ 1.39
DDR1-233ENST00000421124 C2CD5Q86YS7 1000 aa23.73■■□□□ 1.39
DDR1-233ENST00000421124 PELP1Q8IZL8 1130 aaKnown RBP23.73■■□□□ 1.39
DDR1-233ENST00000421124 MRPL50Q8N5N7 158 aaKnown RBP23.73■■□□□ 1.39
DDR1-233ENST00000421124 ABCC12Q96J65 1359 aa23.73■■□□□ 1.39
DDR1-233ENST00000421124 RIC1Q4ADV7 1423 aa23.73■■□□□ 1.39
DDR1-233ENST00000421124 H0YIN7 160 aa23.72■■□□□ 1.39
DDR1-233ENST00000421124 GPR162Q16538 588 aa23.72■■□□□ 1.39
DDR1-233ENST00000421124 CACNA1SQ13698 1873 aa23.71■■□□□ 1.39
DDR1-233ENST00000421124 ARFGEF1Q9Y6D6 1849 aa23.71■■□□□ 1.39
DDR1-233ENST00000421124 NEXNQ0ZGT2 675 aa23.71■■□□□ 1.39
DDR1-233ENST00000421124 DNAAF4Q8WXU2 420 aa23.71■■□□□ 1.39
DDR1-233ENST00000421124 TRMT112Q9UI30 125 aaKnown RBP23.71■■□□□ 1.39
DDR1-233ENST00000421124 LAMB2P55268 1798 aa23.7■■□□□ 1.39
DDR1-233ENST00000421124 CCDC191Q8NCU4 936 aa23.7■■□□□ 1.38
DDR1-233ENST00000421124 BCL2L13Q9BXK5 485 aa23.7■■□□□ 1.38
DDR1-233ENST00000421124 SMC4Q9NTJ3 1288 aa23.7■■□□□ 1.38
DDR1-233ENST00000421124 PIM2Q9P1W9 311 aa23.7■■□□□ 1.38
DDR1-233ENST00000421124 WWC3Q9ULE0 1092 aa23.7■■□□□ 1.38
DDR1-233ENST00000421124 DDX60Q8IY21 1712 aaKnown RBP23.7■■□□□ 1.38
DDR1-233ENST00000421124 SH3TC1Q8TE82 1336 aa23.69■■□□□ 1.38
DDR1-233ENST00000421124 KLRG2A4D1S0 409 aaPredicted RBP23.68■■□□□ 1.38
DDR1-233ENST00000421124 CWC25Q9NXE8 425 aaPredicted RBP23.68■■□□□ 1.38
DDR1-233ENST00000421124 IGKV5-2P06315 115 aa23.67■■□□□ 1.38
DDR1-233ENST00000421124 YBX3P16989 372 aaKnown RBP eCLIP23.67■■□□□ 1.38
DDR1-233ENST00000421124 RARSP54136 660 aaKnown RBP23.67■■□□□ 1.38
DDR1-233ENST00000421124 SLC10A5Q5PT55 438 aa23.67■■□□□ 1.38
DDR1-233ENST00000421124 BCS1LQ9Y276 419 aa23.67■■□□□ 1.38
DDR1-233ENST00000421124 PTPRCP08575 1304 aa23.66■■□□□ 1.38
DDR1-233ENST00000421124 F6X3S4 739 aa23.66■■□□□ 1.38
DDR1-233ENST00000421124 SRGNP10124 158 aa23.66■■□□□ 1.38
DDR1-233ENST00000421124 SYNE4Q8N205 404 aa23.66■■□□□ 1.38
DDR1-233ENST00000421124 ZNF622Q969S3 477 aaKnown RBP eCLIP23.66■■□□□ 1.38
DDR1-233ENST00000421124 DALRD3Q5D0E6 543 aaKnown RBP23.65■■□□□ 1.38
DDR1-233ENST00000421124 STYK1Q6J9G0 422 aa23.65■■□□□ 1.38
DDR1-233ENST00000421124 ZBTB38Q8NAP3 1195 aaPredicted RBP23.65■■□□□ 1.38
DDR1-233ENST00000421124 LINS1Q8NG48 757 aa23.65■■□□□ 1.38
DDR1-233ENST00000421124 FAM89AQ96GI7 184 aa23.65■■□□□ 1.38
DDR1-233ENST00000421124 MASTLQ96GX5 879 aa23.65■■□□□ 1.38
DDR1-233ENST00000421124 NEURL1BA8MQ27 555 aa23.64■■□□□ 1.37
DDR1-233ENST00000421124 NPR1P16066 1061 aa23.64■■□□□ 1.37
DDR1-233ENST00000421124 BRPF1P55201 1214 aaPredicted RBP23.64■■□□□ 1.37
DDR1-233ENST00000421124 CWF19L2Q2TBE0 894 aaKnown RBP23.64■■□□□ 1.37
DDR1-233ENST00000421124 TTLL6Q8N841 843 aa23.64■■□□□ 1.37
DDR1-233ENST00000421124 NLRP3Q96P20 1036 aa23.64■■□□□ 1.37
DDR1-233ENST00000421124 GRIN3BO60391 1043 aa23.63■■□□□ 1.37
DDR1-233ENST00000421124 PCCAP05165 728 aaPredicted RBP23.63■■□□□ 1.37
DDR1-233ENST00000421124 HCLS1P14317 486 aaPredicted RBP23.63■■□□□ 1.37
DDR1-233ENST00000421124 CRY2Q49AN0 593 aa23.63■■□□□ 1.37
DDR1-233ENST00000421124 SLX4Q8IY92 1834 aa23.63■■□□□ 1.37
DDR1-233ENST00000421124 CHD4Q14839 1912 aa23.63■■□□□ 1.37
DDR1-233ENST00000421124 RTL5Q5HYW3 569 aaPredicted RBP23.62■■□□□ 1.37
DDR1-233ENST00000421124 CNKSR1Q969H4 720 aa23.62■■□□□ 1.37
DDR1-233ENST00000421124 MYH3P11055 1940 aa23.62■■□□□ 1.37
DDR1-233ENST00000421124 BEND3Q5T5X7 828 aa23.61■■□□□ 1.37
DDR1-233ENST00000421124 SLC4A10Q6U841 1118 aa23.61■■□□□ 1.37
DDR1-233ENST00000421124 C3orf67Q6ZVT6 689 aa23.61■■□□□ 1.37
DDR1-233ENST00000421124 RPGRQ92834 1020 aaKnown RBP23.61■■□□□ 1.37
DDR1-233ENST00000421124 KIF16BQ96L93 1317 aa23.6■■□□□ 1.37
DDR1-233ENST00000421124 IRS4O14654 1257 aaPredicted RBP23.6■■□□□ 1.37
DDR1-233ENST00000421124 GCKRQ14397 625 aa23.6■■□□□ 1.37
DDR1-233ENST00000421124 HSP90B1P14625 803 aaKnown RBP23.59■■□□□ 1.37
DDR1-233ENST00000421124 YTHDC1Q96MU7 727 aaKnown RBP23.59■■□□□ 1.37
DDR1-233ENST00000421124 NOB1Q9ULX3 412 aaKnown RBP23.59■■□□□ 1.37
DDR1-233ENST00000421124 GOLGB1Q14789 3259 aaKnown RBP23.59■■□□□ 1.37
DDR1-233ENST00000421124 ALDH1B1P30837 517 aa23.58■■□□□ 1.37
DDR1-233ENST00000421124 HOXA10P31260 410 aaPredicted RBP23.58■■□□□ 1.37
DDR1-233ENST00000421124 JARID2Q92833 1246 aaPredicted RBP23.58■■□□□ 1.37
DDR1-233ENST00000421124 SRCIN1Q9C0H9 1055 aa23.58■■□□□ 1.37
DDR1-233ENST00000421124 CDHR2Q9BYE9 1310 aa23.58■■□□□ 1.36
DDR1-233ENST00000421124 PRPF40BQ6NWY9 871 aaKnown RBP23.57■■□□□ 1.36
DDR1-233ENST00000421124 RBM17Q96I25 401 aaKnown RBP23.57■■□□□ 1.36
DDR1-233ENST00000421124 TAF1P21675 1872 aa23.56■■□□□ 1.36
DDR1-233ENST00000421124 H7C1W4 665 aa23.56■■□□□ 1.36
DDR1-233ENST00000421124 BCAR3O75815 825 aa23.56■■□□□ 1.36
DDR1-233ENST00000421124 ALDH1L1O75891 902 aa23.56■■□□□ 1.36
DDR1-233ENST00000421124 UBE3BQ7Z3V4 1068 aa23.56■■□□□ 1.36
DDR1-233ENST00000421124 API5Q9BZZ5 524 aaKnown RBP23.56■■□□□ 1.36
DDR1-233ENST00000421124 ARHGAP45Q92619 1136 aa23.55■■□□□ 1.36
DDR1-233ENST00000421124 CRAMP1Q96RY5 1269 aa23.55■■□□□ 1.36
DDR1-233ENST00000421124 PDE8AO60658 829 aa23.54■■□□□ 1.36
DDR1-233ENST00000421124 SF3B3Q15393 1217 aaKnown RBP23.54■■□□□ 1.36
DDR1-233ENST00000421124 FER1L6Q2WGJ9 1857 aa23.53■■□□□ 1.36
DDR1-233ENST00000421124 IPO8O15397 1037 aaKnown RBP23.53■■□□□ 1.36
DDR1-233ENST00000421124 ARHGAP27Q6ZUM4 889 aa23.53■■□□□ 1.36
DDR1-233ENST00000421124 ZNF219Q9P2Y4 722 aaPredicted RBP23.53■■□□□ 1.36
DDR1-233ENST00000421124 C21orf2O43822 256 aa23.52■■□□□ 1.36
DDR1-233ENST00000421124 CASP7P55210 303 aa23.52■■□□□ 1.36
DDR1-233ENST00000421124 DDX46Q7L014 1031 aaKnown RBP23.52■■□□□ 1.36
DDR1-233ENST00000421124 FRAT1Q92837 279 aaPredicted RBP23.52■■□□□ 1.36
DDR1-233ENST00000421124 ABCC4O15439 1325 aa23.52■■□□□ 1.36
DDR1-233ENST00000421124 GRM8O00222 908 aa23.51■■□□□ 1.35
DDR1-233ENST00000421124 YY1P25490 414 aa23.51■■□□□ 1.35
DDR1-233ENST00000421124 C9orf78Q9NZ63 289 aaPredicted RBP23.51■■□□□ 1.35
DDR1-233ENST00000421124 SBF1O95248 1867 aa23.5■■□□□ 1.35
DDR1-233ENST00000421124 CTSWP56202 376 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms