RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 ZBTB7AO95365 584 aa16.21■□□□□ 0.19
ATG4B-208ENST00000419606 TM4SF1P30408 202 aa16.21■□□□□ 0.19
ATG4B-208ENST00000419606 DDR1Q08345 913 aa16.21■□□□□ 0.19
ATG4B-208ENST00000419606 TRIM28Q13263 835 aaKnown RBP16.21■□□□□ 0.19
ATG4B-208ENST00000419606 GCKRQ14397 625 aa16.21■□□□□ 0.19
ATG4B-208ENST00000419606 EXOC6Q8TAG9 804 aa16.21■□□□□ 0.19
ATG4B-208ENST00000419606 MEIS3Q99687 375 aa16.21■□□□□ 0.19
ATG4B-208ENST00000419606 USP44Q9H0E7 712 aa16.21■□□□□ 0.19
ATG4B-208ENST00000419606 CWC25Q9NXE8 425 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-208ENST00000419606 ZBTB7BO15156 539 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-208ENST00000419606 CCDC24Q8N4L8 307 aa16.2■□□□□ 0.18
ATG4B-208ENST00000419606 CCDC191Q8NCU4 936 aa16.2■□□□□ 0.18
ATG4B-208ENST00000419606 SETDB2Q96T68 719 aa16.2■□□□□ 0.18
ATG4B-208ENST00000419606 NBPF7P0C2Y1 421 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-208ENST00000419606 NLGN1Q8N2Q7 840 aa16.19■□□□□ 0.18
ATG4B-208ENST00000419606 FAM89AQ96GI7 184 aa16.19■□□□□ 0.18
ATG4B-208ENST00000419606 GRM8O00222 908 aa16.18■□□□□ 0.18
ATG4B-208ENST00000419606 POLRMTO00411 1230 aaKnown RBP16.18■□□□□ 0.18
ATG4B-208ENST00000419606 NTSR2O95665 410 aa16.18■□□□□ 0.18
ATG4B-208ENST00000419606 MMP10P09238 476 aa16.18■□□□□ 0.18
ATG4B-208ENST00000419606 PARP10Q53GL7 1025 aa16.18■□□□□ 0.18
ATG4B-208ENST00000419606 UBE3BQ7Z3V4 1068 aa16.18■□□□□ 0.18
ATG4B-208ENST00000419606 NUTM1Q86Y26 1132 aa16.18■□□□□ 0.18
ATG4B-208ENST00000419606 C9orf78Q9NZ63 289 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-208ENST00000419606 TRMT112Q9UI30 125 aaKnown RBP16.18■□□□□ 0.18
ATG4B-208ENST00000419606 ATF5Q9Y2D1 282 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-208ENST00000419606 H7C1W4 665 aa16.17■□□□□ 0.18
ATG4B-208ENST00000419606 CASP7P55210 303 aa16.17■□□□□ 0.18
ATG4B-208ENST00000419606 SLC16A10Q8TF71 515 aa16.17■□□□□ 0.18
ATG4B-208ENST00000419606 UTP14AQ9BVJ6 771 aaKnown RBP16.17■□□□□ 0.18
ATG4B-208ENST00000419606 C1orf115Q9H7X2 142 aa16.17■□□□□ 0.18
ATG4B-208ENST00000419606 UTYO14607 1347 aa16.17■□□□□ 0.18
ATG4B-208ENST00000419606 CARMIL3Q8ND23 1372 aa16.16■□□□□ 0.18
ATG4B-208ENST00000419606 SERPINB2P05120 415 aa16.16■□□□□ 0.18
ATG4B-208ENST00000419606 PCCAP05165 728 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-208ENST00000419606 ERFEQ4G0M1 354 aa16.16■□□□□ 0.18
ATG4B-208ENST00000419606 PPP1R42Q7Z4L9 355 aa16.16■□□□□ 0.18
ATG4B-208ENST00000419606 NBPF5PQ86XG9 351 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-208ENST00000419606 ZBTB38Q8NAP3 1195 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-208ENST00000419606 SUCLG2Q96I99 432 aa16.16■□□□□ 0.18
ATG4B-208ENST00000419606 DDX19BQ9UMR2 479 aa16.16■□□□□ 0.18
ATG4B-208ENST00000419606 DDX60Q8IY21 1712 aaKnown RBP16.16■□□□□ 0.18
ATG4B-208ENST00000419606 NRXN2Q9P2S2 1712 aa16.16■□□□□ 0.18
ATG4B-208ENST00000419606 ABCC12Q96J65 1359 aa16.15■□□□□ 0.18
ATG4B-208ENST00000419606 HCLS1P14317 486 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-208ENST00000419606 EPHA10Q5JZY3 1008 aa16.15■□□□□ 0.18
ATG4B-208ENST00000419606 KAZALD1Q96I82 304 aa16.15■□□□□ 0.18
ATG4B-208ENST00000419606 IBTKQ9P2D0 1353 aaPredicted RBP16.14■□□□□ 0.17
ATG4B-208ENST00000419606 PRR5LQ6MZQ0 368 aa16.14■□□□□ 0.17
ATG4B-208ENST00000419606 MTFR1LQ9H019 292 aa16.14■□□□□ 0.17
ATG4B-208ENST00000419606 ZBTB40Q9NUA8 1239 aa16.14■□□□□ 0.17
ATG4B-208ENST00000419606 LRRFIP2Q9Y608 721 aaKnown RBP16.14■□□□□ 0.17
ATG4B-208ENST00000419606 PARP3Q9Y6F1 533 aa16.14■□□□□ 0.17
ATG4B-208ENST00000419606 TNRC6CQ9HCJ0 1690 aaKnown RBP16.14■□□□□ 0.17
ATG4B-208ENST00000419606 UBTFL1P0CB47 393 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-208ENST00000419606 C3orf67Q6ZVT6 689 aa16.13■□□□□ 0.17
ATG4B-208ENST00000419606 SH3TC1Q8TE82 1336 aa16.13■□□□□ 0.17
ATG4B-208ENST00000419606 LAMB2P55268 1798 aa16.13■□□□□ 0.17
ATG4B-208ENST00000419606 ANKRD31Q8N7Z5 1873 aa16.12■□□□□ 0.17
ATG4B-208ENST00000419606 IRS4O14654 1257 aaPredicted RBP16.12■□□□□ 0.17
ATG4B-208ENST00000419606 NEFLP07196 543 aa16.12■□□□□ 0.17
ATG4B-208ENST00000419606 GNAI3P08754 354 aa16.12■□□□□ 0.17
ATG4B-208ENST00000419606 GTF2E1P29083 439 aaPredicted RBP16.12■□□□□ 0.17
ATG4B-208ENST00000419606 FOXO4P98177 505 aa16.12■□□□□ 0.17
ATG4B-208ENST00000419606 TPTE2Q6XPS3 522 aa16.12■□□□□ 0.17
ATG4B-208ENST00000419606 CNBD1Q8NA66 436 aa16.12■□□□□ 0.17
ATG4B-208ENST00000419606 NYXQ9GZU5 481 aa16.12■□□□□ 0.17
ATG4B-208ENST00000419606 CDHR2Q9BYE9 1310 aa16.12■□□□□ 0.17
ATG4B-208ENST00000419606 GNAI2P04899 355 aa16.11■□□□□ 0.17
ATG4B-208ENST00000419606 PTGER2P43116 358 aa16.11■□□□□ 0.17
ATG4B-208ENST00000419606 SGIP1Q9BQI5 828 aa16.11■□□□□ 0.17
ATG4B-208ENST00000419606 BICC1Q9H694 974 aaKnown RBP16.11■□□□□ 0.17
ATG4B-208ENST00000419606 NPHP1O15259 732 aa16.1■□□□□ 0.17
ATG4B-208ENST00000419606 ANKRD44Q8N8A2 993 aa16.1■□□□□ 0.17
ATG4B-208ENST00000419606 CCDC85AQ96PX6 553 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-208ENST00000419606 PCDHB15Q9Y5E8 787 aa16.1■□□□□ 0.17
ATG4B-208ENST00000419606 MYH3P11055 1940 aa16.09■□□□□ 0.17
ATG4B-208ENST00000419606 SLC10A5Q5PT55 438 aa16.09■□□□□ 0.17
ATG4B-208ENST00000419606 PDE8AO60658 829 aa16.08■□□□□ 0.16
ATG4B-208ENST00000419606 PLA2G12BQ9BX93 195 aa16.08■□□□□ 0.16
ATG4B-208ENST00000419606 COL4A1P02462 1669 aa16.08■□□□□ 0.16
ATG4B-208ENST00000419606 POLD1P28340 1107 aa16.07■□□□□ 0.16
ATG4B-208ENST00000419606 CTSWP56202 376 aa16.07■□□□□ 0.16
ATG4B-208ENST00000419606 ST5P78524 1137 aa16.07■□□□□ 0.16
ATG4B-208ENST00000419606 CEP85Q6P2H3 762 aa16.07■□□□□ 0.16
ATG4B-208ENST00000419606 LMBR1LQ6UX01 489 aa16.07■□□□□ 0.16
ATG4B-208ENST00000419606 SIRT2Q8IXJ6 389 aa16.07■□□□□ 0.16
ATG4B-208ENST00000419606 TAF1P21675 1872 aa16.07■□□□□ 0.16
ATG4B-208ENST00000419606 COL11A2P13942 1736 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-208ENST00000419606 PNMA6EA0A0J9YXQ4 647 aa16.06■□□□□ 0.16
ATG4B-208ENST00000419606 CSF1RP07333 972 aa16.06■□□□□ 0.16
ATG4B-208ENST00000419606 RABL6Q3YEC7 729 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-208ENST00000419606 TTLL11Q8NHH1 800 aa16.06■□□□□ 0.16
ATG4B-208ENST00000419606 CHMP4BQ9H444 224 aaKnown RBP16.06■□□□□ 0.16
ATG4B-208ENST00000419606 RIC1Q4ADV7 1423 aa16.05■□□□□ 0.16
ATG4B-208ENST00000419606 C10orf71Q711Q0 1435 aa16.05■□□□□ 0.16
ATG4B-208ENST00000419606 GREM2Q9H772 168 aa16.05■□□□□ 0.16
ATG4B-208ENST00000419606 SPON1Q9HCB6 807 aa16.05■□□□□ 0.16
ATG4B-208ENST00000419606 CHMP3Q9Y3E7 222 aa16.05■□□□□ 0.16
ATG4B-208ENST00000419606 KIF13BQ9NQT8 1826 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms