RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 NIP7Q9Y221 180 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTPA-213ENST00000419582 USP16Q9Y5T5 823 aa20.44■□□□□ 0.86
PTPA-213ENST00000419582 COL4A5P29400 1685 aa20.44■□□□□ 0.86
PTPA-213ENST00000419582 CEMIPQ8WUJ3 1361 aa20.44■□□□□ 0.86
PTPA-213ENST00000419582 CIAPIN1Q6FI81 312 aa20.43■□□□□ 0.86
PTPA-213ENST00000419582 SAGE1Q9NXZ1 904 aa20.43■□□□□ 0.86
PTPA-213ENST00000419582 LARGE2Q8N3Y3 721 aa20.42■□□□□ 0.86
PTPA-213ENST00000419582 GAS2L2Q8NHY3 880 aa20.42■□□□□ 0.86
PTPA-213ENST00000419582 POLR3GLQ9BT43 218 aa20.42■□□□□ 0.86
PTPA-213ENST00000419582 KNSTRNQ9Y448 316 aa20.42■□□□□ 0.86
PTPA-213ENST00000419582 KIF7Q2M1P5 1343 aa20.42■□□□□ 0.86
PTPA-213ENST00000419582 SIPA1L3O60292 1781 aaPredicted RBP20.4■□□□□ 0.86
PTPA-213ENST00000419582 DIAPH1O60610 1272 aaKnown RBP20.4■□□□□ 0.86
PTPA-213ENST00000419582 CDHR2Q9BYE9 1310 aa20.4■□□□□ 0.86
PTPA-213ENST00000419582 AMER1Q5JTC6 1135 aaPredicted RBP20.39■□□□□ 0.85
PTPA-213ENST00000419582 CDC37L1Q7L3B6 337 aa20.39■□□□□ 0.85
PTPA-213ENST00000419582 CRAMP1Q96RY5 1269 aa20.39■□□□□ 0.85
PTPA-213ENST00000419582 NYXQ9GZU5 481 aa20.39■□□□□ 0.85
PTPA-213ENST00000419582 RIC1Q4ADV7 1423 aa20.38■□□□□ 0.85
PTPA-213ENST00000419582 BTBD11A6QL63 1104 aa20.38■□□□□ 0.85
PTPA-213ENST00000419582 SNRPA1P09661 255 aaKnown RBP20.38■□□□□ 0.85
PTPA-213ENST00000419582 NIM1KQ8IY84 436 aa20.38■□□□□ 0.85
PTPA-213ENST00000419582 GLIS2Q9BZE0 524 aaPredicted RBP20.38■□□□□ 0.85
PTPA-213ENST00000419582 KCNQ3O43525 872 aa20.37■□□□□ 0.85
PTPA-213ENST00000419582 GTF2E1P29083 439 aaPredicted RBP20.37■□□□□ 0.85
PTPA-213ENST00000419582 NBPF26B4DH59 902 aa20.36■□□□□ 0.85
PTPA-213ENST00000419582 NBPF10Q6P3W6 841 aaKnown RBP20.36■□□□□ 0.85
PTPA-213ENST00000419582 NBPF15Q8N660 670 aa20.36■□□□□ 0.85
PTPA-213ENST00000419582 ZIC5Q96T25 663 aa20.36■□□□□ 0.85
PTPA-213ENST00000419582 NPC1L1Q9UHC9 1359 aa20.35■□□□□ 0.85
PTPA-213ENST00000419582 CXCL9Q07325 125 aa20.35■□□□□ 0.85
PTPA-213ENST00000419582 ZNRF3Q9ULT6 936 aa20.35■□□□□ 0.85
PTPA-213ENST00000419582 FAM155AB1AL88 458 aaPredicted RBP20.34■□□□□ 0.85
PTPA-213ENST00000419582 ERVV-1B6SEH8 477 aa20.34■□□□□ 0.85
PTPA-213ENST00000419582 PIP4K2AP48426 406 aaPredicted RBP20.34■□□□□ 0.85
PTPA-213ENST00000419582 SOX10P56693 466 aa20.34■□□□□ 0.85
PTPA-213ENST00000419582 HLFQ16534 295 aa20.34■□□□□ 0.85
PTPA-213ENST00000419582 RTFDC1Q9BY42 306 aaPredicted RBP20.34■□□□□ 0.85
PTPA-213ENST00000419582 IBTKQ9P2D0 1353 aaPredicted RBP20.34■□□□□ 0.85
PTPA-213ENST00000419582 HIRAP54198 1017 aaPredicted RBP20.33■□□□□ 0.85
PTPA-213ENST00000419582 RPGRQ92834 1020 aaKnown RBP20.33■□□□□ 0.85
PTPA-213ENST00000419582 CCDC102AQ96A19 550 aa20.33■□□□□ 0.85
PTPA-213ENST00000419582 PRAMEF22A3QJZ6 481 aa20.32■□□□□ 0.84
PTPA-213ENST00000419582 PPIP5K2O43314 1243 aa20.32■□□□□ 0.84
PTPA-213ENST00000419582 HUNKP57058 714 aa20.32■□□□□ 0.84
PTPA-213ENST00000419582 GCC1Q96CN9 775 aa20.32■□□□□ 0.84
PTPA-213ENST00000419582 RBM17Q96I25 401 aaKnown RBP20.32■□□□□ 0.84
PTPA-213ENST00000419582 FAM177BA6PVY3 158 aa20.31■□□□□ 0.84
PTPA-213ENST00000419582 GMPSP49915 693 aaPredicted RBP20.31■□□□□ 0.84
PTPA-213ENST00000419582 EIF4G2P78344 907 aaKnown RBP eCLIP20.31■□□□□ 0.84
PTPA-213ENST00000419582 SUPT20HQ8NEM7 779 aa20.31■□□□□ 0.84
PTPA-213ENST00000419582 ABCC12Q96J65 1359 aa20.31■□□□□ 0.84
PTPA-213ENST00000419582 PPEF1O14829 653 aaPredicted RBP20.3■□□□□ 0.84
PTPA-213ENST00000419582 TNIP1Q15025 636 aa20.3■□□□□ 0.84
PTPA-213ENST00000419582 RGMBQ6NW40 437 aa20.3■□□□□ 0.84
PTPA-213ENST00000419582 CTU1Q7Z7A3 348 aaKnown RBP20.3■□□□□ 0.84
PTPA-213ENST00000419582 REM2Q8IYK8 340 aaPredicted RBP20.3■□□□□ 0.84
PTPA-213ENST00000419582 RNF186Q9NXI6 227 aa20.3■□□□□ 0.84
PTPA-213ENST00000419582 ATP6V0A2Q9Y487 856 aa20.3■□□□□ 0.84
PTPA-213ENST00000419582 AOC3Q16853 763 aa20.29■□□□□ 0.84
PTPA-213ENST00000419582 KIF23Q02241 960 aaPredicted RBP20.28■□□□□ 0.84
PTPA-213ENST00000419582 PKN2Q16513 984 aaKnown RBP20.28■□□□□ 0.84
PTPA-213ENST00000419582 NUTM1Q86Y26 1132 aa20.28■□□□□ 0.84
PTPA-213ENST00000419582 TMX4Q9H1E5 349 aaPredicted RBP20.28■□□□□ 0.84
PTPA-213ENST00000419582 ZNF408Q9H9D4 720 aa20.28■□□□□ 0.84
PTPA-213ENST00000419582 TRPA1O75762 1119 aa20.26■□□□□ 0.83
PTPA-213ENST00000419582 HSPA5P11021 654 aaKnown RBP20.26■□□□□ 0.83
PTPA-213ENST00000419582 KIAA2012Q0VF49 1180 aa20.26■□□□□ 0.83
PTPA-213ENST00000419582 DPF2Q92785 391 aa20.26■□□□□ 0.83
PTPA-213ENST00000419582 CNOT7Q9UIV1 285 aaKnown RBP20.26■□□□□ 0.83
PTPA-213ENST00000419582 H7C1D1 291 aa20.25■□□□□ 0.83
PTPA-213ENST00000419582 USP48Q86UV5 1035 aa20.25■□□□□ 0.83
PTPA-213ENST00000419582 C2orf69Q8N8R5 385 aa20.25■□□□□ 0.83
PTPA-213ENST00000419582 TRPM4Q8TD43 1214 aa20.25■□□□□ 0.83
PTPA-213ENST00000419582 MAP3K15Q6ZN16 1313 aa20.25■□□□□ 0.83
PTPA-213ENST00000419582 COL3A1P02461 1466 aaPredicted RBP20.24■□□□□ 0.83
PTPA-213ENST00000419582 PER1O15534 1290 aaPredicted RBP20.24■□□□□ 0.83
PTPA-213ENST00000419582 SLC10A5Q5PT55 438 aa20.24■□□□□ 0.83
PTPA-213ENST00000419582 PHACTR3Q96KR7 559 aa20.24■□□□□ 0.83
PTPA-213ENST00000419582 CSRNP1Q96S65 589 aa20.24■□□□□ 0.83
PTPA-213ENST00000419582 BCL2L13Q9BXK5 485 aa20.24■□□□□ 0.83
PTPA-213ENST00000419582 GBA2Q9HCG7 927 aaPredicted RBP20.24■□□□□ 0.83
PTPA-213ENST00000419582 HPS5Q9UPZ3 1129 aa20.24■□□□□ 0.83
PTPA-213ENST00000419582 BBOX1O75936 387 aa20.23■□□□□ 0.83
PTPA-213ENST00000419582 SP8Q8IXZ3 490 aa20.23■□□□□ 0.83
PTPA-213ENST00000419582 ZNF34Q8IZ26 560 aa20.23■□□□□ 0.83
PTPA-213ENST00000419582 HTATSF1O43719 755 aaKnown RBP20.22■□□□□ 0.83
PTPA-213ENST00000419582 ZNF157P51786 506 aaPredicted RBP20.22■□□□□ 0.83
PTPA-213ENST00000419582 SUSD4Q5VX71 490 aa20.22■□□□□ 0.83
PTPA-213ENST00000419582 NLRP3Q96P20 1036 aa20.22■□□□□ 0.83
PTPA-213ENST00000419582 UBN2Q6ZU65 1347 aa20.22■□□□□ 0.83
PTPA-213ENST00000419582 U2SURPO15042 1029 aaKnown RBP20.21■□□□□ 0.83
PTPA-213ENST00000419582 NTSR2O95665 410 aa20.21■□□□□ 0.83
PTPA-213ENST00000419582 SLC10A3P09131 477 aa20.21■□□□□ 0.83
PTPA-213ENST00000419582 SLC51AQ86UW1 340 aa20.21■□□□□ 0.83
PTPA-213ENST00000419582 RAD17O75943 681 aa20.2■□□□□ 0.82
PTPA-213ENST00000419582 NOM1Q5C9Z4 860 aaKnown RBP20.2■□□□□ 0.82
PTPA-213ENST00000419582 DPP8Q6V1X1 898 aaPredicted RBP20.2■□□□□ 0.82
PTPA-213ENST00000419582 KRT26Q7Z3Y9 468 aa20.2■□□□□ 0.82
PTPA-213ENST00000419582 MPNDQ8N594 471 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms