RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 TRIM35Q9UPQ4 493 aa12.35□□□□□ -0.43
NUP50-205ENST00000419387 FER1L6Q2WGJ9 1857 aa12.34□□□□□ -0.43
NUP50-205ENST00000419387 CCDC88AQ3V6T2 1871 aa12.34□□□□□ -0.43
NUP50-205ENST00000419387 GPTP24298 496 aa12.34□□□□□ -0.43
NUP50-205ENST00000419387 CCDC93Q567U6 631 aa12.34□□□□□ -0.43
NUP50-205ENST00000419387 SUSD4Q5VX71 490 aa12.34□□□□□ -0.43
NUP50-205ENST00000419387 LRP10Q7Z4F1 713 aa12.34□□□□□ -0.43
NUP50-205ENST00000419387 NUTM1Q86Y26 1132 aa12.34□□□□□ -0.43
NUP50-205ENST00000419387 LAS1LQ9Y4W2 734 aaKnown RBP12.34□□□□□ -0.43
NUP50-205ENST00000419387 UBN2Q6ZU65 1347 aa12.34□□□□□ -0.43
NUP50-205ENST00000419387 NUP98P52948 1817 aa12.33□□□□□ -0.44
NUP50-205ENST00000419387 POTECB2RU33 542 aa12.33□□□□□ -0.44
NUP50-205ENST00000419387 CRY2Q49AN0 593 aa12.33□□□□□ -0.44
NUP50-205ENST00000419387 PPP1R42Q7Z4L9 355 aa12.33□□□□□ -0.44
NUP50-205ENST00000419387 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
NUP50-205ENST00000419387 TNRC6CQ9HCJ0 1690 aaKnown RBP12.32□□□□□ -0.44
NUP50-205ENST00000419387 IBTKQ9P2D0 1353 aaPredicted RBP12.32□□□□□ -0.44
NUP50-205ENST00000419387 ANXA1P04083 346 aa12.32□□□□□ -0.44
NUP50-205ENST00000419387 FKBP4Q02790 459 aaKnown RBP eCLIP12.32□□□□□ -0.44
NUP50-205ENST00000419387 PROSER3Q2NL68 480 aa12.32□□□□□ -0.44
NUP50-205ENST00000419387 PARP10Q53GL7 1025 aa12.32□□□□□ -0.44
NUP50-205ENST00000419387 COPS6Q7L5N1 327 aa12.32□□□□□ -0.44
NUP50-205ENST00000419387 RTKN2Q8IZC4 609 aa12.32□□□□□ -0.44
NUP50-205ENST00000419387 DNAJC5GQ8N7S2 189 aa12.32□□□□□ -0.44
NUP50-205ENST00000419387 NECTIN2Q92692 538 aa12.32□□□□□ -0.44
NUP50-205ENST00000419387 ABCC12Q96J65 1359 aa12.31□□□□□ -0.44
NUP50-205ENST00000419387 ARFGEF2Q9Y6D5 1785 aa12.31□□□□□ -0.44
NUP50-205ENST00000419387 NTSR2O95665 410 aa12.31□□□□□ -0.44
NUP50-205ENST00000419387 AIMP1Q12904 312 aaKnown RBP12.31□□□□□ -0.44
NUP50-205ENST00000419387 KRT24Q2M2I5 525 aa12.31□□□□□ -0.44
NUP50-205ENST00000419387 OLFM4Q6UX06 510 aa12.31□□□□□ -0.44
NUP50-205ENST00000419387 DDX21Q9NR30 783 aaKnown RBP eCLIP12.31□□□□□ -0.44
NUP50-205ENST00000419387 CACNA1SQ13698 1873 aa12.31□□□□□ -0.44
NUP50-205ENST00000419387 TIAM2Q8IVF5 1701 aa12.31□□□□□ -0.44
NUP50-205ENST00000419387 DDNO94850 711 aaPredicted RBP12.3□□□□□ -0.44
NUP50-205ENST00000419387 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
NUP50-205ENST00000419387 HSP90AB3PQ58FF7 597 aa12.3□□□□□ -0.44
NUP50-205ENST00000419387 XAGE3Q8WTP9 111 aa12.3□□□□□ -0.44
NUP50-205ENST00000419387 RPGRQ92834 1020 aaKnown RBP12.3□□□□□ -0.44
NUP50-205ENST00000419387 RBM17Q96I25 401 aaKnown RBP12.3□□□□□ -0.44
NUP50-205ENST00000419387 CFAP44Q96MT7 982 aa12.3□□□□□ -0.44
NUP50-205ENST00000419387 UTP14AQ9BVJ6 771 aaKnown RBP12.3□□□□□ -0.44
NUP50-205ENST00000419387 DICER1Q9UPY3 1922 aaKnown RBP12.3□□□□□ -0.44
NUP50-205ENST00000419387 RIC1Q4ADV7 1423 aa12.29□□□□□ -0.44
NUP50-205ENST00000419387 HOXB7P09629 217 aa12.29□□□□□ -0.44
NUP50-205ENST00000419387 SLC10A5Q5PT55 438 aa12.29□□□□□ -0.44
NUP50-205ENST00000419387 CC2D2BQ6DHV5 1058 aa12.29□□□□□ -0.44
NUP50-205ENST00000419387 SYNE4Q8N205 404 aa12.29□□□□□ -0.44
NUP50-205ENST00000419387 NLRP3Q96P20 1036 aa12.29□□□□□ -0.44
NUP50-205ENST00000419387 CRAMP1Q96RY5 1269 aa12.29□□□□□ -0.44
NUP50-205ENST00000419387 ZNF277Q9NRM2 450 aaPredicted RBP12.29□□□□□ -0.44
NUP50-205ENST00000419387 CEP350Q5VT06 3117 aa12.29□□□□□ -0.44
NUP50-205ENST00000419387 WDR90Q96KV7 1748 aa12.28□□□□□ -0.44
NUP50-205ENST00000419387 APAF1O14727 1248 aa12.28□□□□□ -0.44
NUP50-205ENST00000419387 HTRA3P83110 453 aa12.28□□□□□ -0.44
NUP50-205ENST00000419387 TCIRG1Q13488 830 aa12.28□□□□□ -0.44
NUP50-205ENST00000419387 HDGFL1Q5TGJ6 251 aa12.28□□□□□ -0.44
NUP50-205ENST00000419387 PSMD1Q99460 953 aa12.28□□□□□ -0.44
NUP50-205ENST00000419387 CHPF2Q9P2E5 772 aa12.28□□□□□ -0.44
NUP50-205ENST00000419387 ZNF316A6NFI3 1004 aaPredicted RBP12.27□□□□□ -0.45
NUP50-205ENST00000419387 ZNF853P0CG23 659 aa12.27□□□□□ -0.45
NUP50-205ENST00000419387 IARSP41252 1262 aaKnown RBP12.27□□□□□ -0.45
NUP50-205ENST00000419387 EVX2Q03828 476 aa12.27□□□□□ -0.45
NUP50-205ENST00000419387 GRIPAP1Q4V328 841 aa12.27□□□□□ -0.45
NUP50-205ENST00000419387 DUSP27Q5VZP5 1158 aa12.27□□□□□ -0.45
NUP50-205ENST00000419387 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.45
NUP50-205ENST00000419387 NLRP10Q86W26 655 aa12.27□□□□□ -0.45
NUP50-205ENST00000419387 SPDYE1Q8NFV5 336 aaPredicted RBP12.27□□□□□ -0.45
NUP50-205ENST00000419387 MBIPQ9NS73 344 aa12.27□□□□□ -0.45
NUP50-205ENST00000419387 DBF4Q9UBU7 674 aaPredicted RBP12.27□□□□□ -0.45
NUP50-205ENST00000419387 RNF123Q5XPI4 1314 aa12.27□□□□□ -0.45
NUP50-205ENST00000419387 IQCA1LA6NCM1 817 aa12.26□□□□□ -0.45
NUP50-205ENST00000419387 FZD9O00144 591 aa12.26□□□□□ -0.45
NUP50-205ENST00000419387 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
NUP50-205ENST00000419387 GNAI1P63096 354 aa12.26□□□□□ -0.45
NUP50-205ENST00000419387 CALD1Q05682 793 aaKnown RBP12.26□□□□□ -0.45
NUP50-205ENST00000419387 ANKRD13DQ6ZTN6 518 aa12.26□□□□□ -0.45
NUP50-205ENST00000419387 PLBD2Q8NHP8 589 aa12.26□□□□□ -0.45
NUP50-205ENST00000419387 KLRG1Q96E93 195 aa12.26□□□□□ -0.45
NUP50-205ENST00000419387 L3MBTL3Q96JM7 780 aaPredicted RBP12.26□□□□□ -0.45
NUP50-205ENST00000419387 TRMT112Q9UI30 125 aaKnown RBP12.26□□□□□ -0.45
NUP50-205ENST00000419387 TCERG1O14776 1098 aaKnown RBP12.25□□□□□ -0.45
NUP50-205ENST00000419387 JDP2Q8WYK2 163 aa12.25□□□□□ -0.45
NUP50-205ENST00000419387 TMX4Q9H1E5 349 aaPredicted RBP12.25□□□□□ -0.45
NUP50-205ENST00000419387 IFT57Q9NWB7 429 aa12.25□□□□□ -0.45
NUP50-205ENST00000419387 HYPKQ9NX55 129 aa12.25□□□□□ -0.45
NUP50-205ENST00000419387 SNED1Q8TER0 1413 aa12.25□□□□□ -0.45
NUP50-205ENST00000419387 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
NUP50-205ENST00000419387 HCLS1P14317 486 aaPredicted RBP12.24□□□□□ -0.45
NUP50-205ENST00000419387 CHADLQ6NUI6 762 aa12.24□□□□□ -0.45
NUP50-205ENST00000419387 SH3TC1Q8TE82 1336 aa12.24□□□□□ -0.45
NUP50-205ENST00000419387 ZNF541Q9H0D2 1346 aa12.24□□□□□ -0.45
NUP50-205ENST00000419387 TAF1DQ9H5J8 278 aaPredicted RBP12.24□□□□□ -0.45
NUP50-205ENST00000419387 CLEC11AQ9Y240 323 aa12.24□□□□□ -0.45
NUP50-205ENST00000419387 BBOX1O75936 387 aa12.23□□□□□ -0.45
NUP50-205ENST00000419387 POTEIP0CG38 1075 aa12.23□□□□□ -0.45
NUP50-205ENST00000419387 POTEJP0CG39 1038 aa12.23□□□□□ -0.45
NUP50-205ENST00000419387 CCDC184Q52MB2 194 aa12.23□□□□□ -0.45
NUP50-205ENST00000419387 ISCA1Q9BUE6 129 aa12.23□□□□□ -0.45
NUP50-205ENST00000419387 HACL1Q9UJ83 578 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms