RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 TYRO3Q06418 890 aa7.7□□□□□ -1.18
TTC39DP-201ENST00000416781 NFX1Q12986 1120 aaKnown RBP7.7□□□□□ -1.18
TTC39DP-201ENST00000416781 ECM1Q16610 540 aa7.7□□□□□ -1.18
TTC39DP-201ENST00000416781 CCDC27Q2M243 656 aa7.7□□□□□ -1.18
TTC39DP-201ENST00000416781 ZCCHC2Q9C0B9 1178 aaKnown RBP7.7□□□□□ -1.18
TTC39DP-201ENST00000416781 DMGDHQ9UI17 866 aaKnown RBP7.7□□□□□ -1.18
TTC39DP-201ENST00000416781 ATXN7O15265 892 aaPredicted RBP7.7□□□□□ -1.18
TTC39DP-201ENST00000416781 ZNF326Q5BKZ1 582 aaKnown RBP7.7□□□□□ -1.18
TTC39DP-201ENST00000416781 DCDC2BA2VCK2 349 aa7.69□□□□□ -1.18
TTC39DP-201ENST00000416781 ARSDP51689 593 aa7.69□□□□□ -1.18
TTC39DP-201ENST00000416781 GTPBP3Q969Y2 492 aaKnown RBP7.69□□□□□ -1.18
TTC39DP-201ENST00000416781 BRD7Q9NPI1 651 aa7.69□□□□□ -1.18
TTC39DP-201ENST00000416781 FAM13BQ9NYF5 915 aa7.69□□□□□ -1.18
TTC39DP-201ENST00000416781 NXF1Q9UBU9 619 aaKnown RBP7.69□□□□□ -1.18
TTC39DP-201ENST00000416781 PCDHGC4Q9Y5F7 938 aa7.69□□□□□ -1.18
TTC39DP-201ENST00000416781 KHNYNO15037 678 aaKnown RBP7.68□□□□□ -1.18
TTC39DP-201ENST00000416781 NDUFB5O43674 189 aa7.68□□□□□ -1.18
TTC39DP-201ENST00000416781 FAM157BP0CG42 384 aa7.68□□□□□ -1.18
TTC39DP-201ENST00000416781 EPB42P16452 691 aa7.68□□□□□ -1.18
TTC39DP-201ENST00000416781 MARSP56192 900 aaKnown RBP7.68□□□□□ -1.18
TTC39DP-201ENST00000416781 UBAP2LQ14157 1087 aaKnown RBP7.68□□□□□ -1.18
TTC39DP-201ENST00000416781 TICAM2Q86XR7 235 aa7.68□□□□□ -1.18
TTC39DP-201ENST00000416781 RGL4Q8IZJ4 473 aa7.68□□□□□ -1.18
TTC39DP-201ENST00000416781 GPR152Q8TDT2 470 aa7.68□□□□□ -1.18
TTC39DP-201ENST00000416781 EDEM1Q92611 657 aa7.68□□□□□ -1.18
TTC39DP-201ENST00000416781 BRPF3Q9ULD4 1205 aa7.68□□□□□ -1.18
TTC39DP-201ENST00000416781 FZD6O60353 706 aa7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 MAPK1P28482 360 aa7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 INPP5BP32019 993 aa7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 VEGFBP49765 207 aa7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 DNM1Q05193 864 aaKnown RBP7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 FOXR1Q6PIV2 292 aa7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 VWA5B2Q8N398 1253 aa7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 DCTN4Q9UJW0 460 aa7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 OPLAHO14841 1288 aa7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 MFAP1P55081 439 aaKnown RBP7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 SV2AQ7L0J3 742 aa7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 PIK3R5Q8WYR1 880 aa7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 ABHD17AQ96GS6 310 aa7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 TRERF1Q96PN7 1200 aa7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 CCDC87Q9NVE4 849 aa7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 USP20Q9Y2K6 914 aa7.67□□□□□ -1.18
TTC39DP-201ENST00000416781 GPR25O00155 361 aa7.66□□□□□ -1.18
TTC39DP-201ENST00000416781 BNIP3LO60238 219 aa7.66□□□□□ -1.18
TTC39DP-201ENST00000416781 PCSK2P16519 638 aa7.66□□□□□ -1.18
TTC39DP-201ENST00000416781 MZF1P28698 734 aaPredicted RBP7.66□□□□□ -1.18
TTC39DP-201ENST00000416781 NANOS1Q8WY41 292 aaKnown RBP7.66□□□□□ -1.18
TTC39DP-201ENST00000416781 POLIQ9UNA4 740 aa7.66□□□□□ -1.18
TTC39DP-201ENST00000416781 PHF24Q9UPV7 400 aa7.66□□□□□ -1.18
TTC39DP-201ENST00000416781 EFSO43281 561 aa7.65□□□□□ -1.18
TTC39DP-201ENST00000416781 PDGFAP04085 211 aa7.65□□□□□ -1.18
TTC39DP-201ENST00000416781 MAPTP10636 758 aaKnown RBP7.65□□□□□ -1.18
TTC39DP-201ENST00000416781 NPAS3Q8IXF0 933 aa7.65□□□□□ -1.18
TTC39DP-201ENST00000416781 NUDT16Q96DE0 195 aaKnown RBP7.65□□□□□ -1.18
TTC39DP-201ENST00000416781 ATXN7L1Q9ULK2 861 aaPredicted RBP7.65□□□□□ -1.18
TTC39DP-201ENST00000416781 RTCBQ9Y3I0 505 aaKnown RBP7.65□□□□□ -1.18
TTC39DP-201ENST00000416781 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.65□□□□□ -1.18
TTC39DP-201ENST00000416781 TNP2Q05952 138 aa7.64□□□□□ -1.19
TTC39DP-201ENST00000416781 CMTR1Q8N1G2 835 aaKnown RBP7.64□□□□□ -1.19
TTC39DP-201ENST00000416781 TTC16Q8NEE8 873 aa7.64□□□□□ -1.19
TTC39DP-201ENST00000416781 NDFIP2Q9NV92 336 aa7.64□□□□□ -1.19
TTC39DP-201ENST00000416781 KCNH4Q9UQ05 1017 aa7.64□□□□□ -1.19
TTC39DP-201ENST00000416781 H3BM21 787 aa7.63□□□□□ -1.19
TTC39DP-201ENST00000416781 USP5P45974 858 aa7.63□□□□□ -1.19
TTC39DP-201ENST00000416781 SFSWAPQ12872 951 aaKnown RBP7.63□□□□□ -1.19
TTC39DP-201ENST00000416781 LAMC2Q13753 1193 aa7.63□□□□□ -1.19
TTC39DP-201ENST00000416781 TMC1Q8TDI8 760 aa7.63□□□□□ -1.19
TTC39DP-201ENST00000416781 FGFR3P22607 806 aa7.63□□□□□ -1.19
TTC39DP-201ENST00000416781 KCNQ4P56696 695 aa7.63□□□□□ -1.19
TTC39DP-201ENST00000416781 C8orf34Q49A92 452 aa7.63□□□□□ -1.19
TTC39DP-201ENST00000416781 CFHR5Q9BXR6 569 aa7.63□□□□□ -1.19
TTC39DP-201ENST00000416781 MARK1Q9P0L2 795 aa7.63□□□□□ -1.19
TTC39DP-201ENST00000416781 TERTO14746 1132 aaKnown RBP7.62□□□□□ -1.19
TTC39DP-201ENST00000416781 CLSTN1O94985 981 aa7.62□□□□□ -1.19
TTC39DP-201ENST00000416781 RPLP1P05386 114 aaKnown RBP7.62□□□□□ -1.19
TTC39DP-201ENST00000416781 CD33P20138 364 aa7.62□□□□□ -1.19
TTC39DP-201ENST00000416781 GRNP28799 593 aaKnown RBP7.62□□□□□ -1.19
TTC39DP-201ENST00000416781 TRIP4Q15650 581 aaPredicted RBP7.62□□□□□ -1.19
TTC39DP-201ENST00000416781 ZSCAN29Q8IWY8 852 aaPredicted RBP7.62□□□□□ -1.19
TTC39DP-201ENST00000416781 ZNF428Q96B54 188 aa7.62□□□□□ -1.19
TTC39DP-201ENST00000416781 CITED4Q96RK1 184 aa7.62□□□□□ -1.19
TTC39DP-201ENST00000416781 RBCK1Q9BYM8 510 aa7.62□□□□□ -1.19
TTC39DP-201ENST00000416781 STRN4Q9NRL3 753 aa7.62□□□□□ -1.19
TTC39DP-201ENST00000416781 FNDC3AQ9Y2H6 1198 aaKnown RBP7.62□□□□□ -1.19
TTC39DP-201ENST00000416781 PDE3BQ13370 1112 aa7.61□□□□□ -1.19
TTC39DP-201ENST00000416781 GJD3Q8N144 294 aa7.61□□□□□ -1.19
TTC39DP-201ENST00000416781 SLC16A10Q8TF71 515 aa7.61□□□□□ -1.19
TTC39DP-201ENST00000416781 ASB16Q96NS5 453 aa7.61□□□□□ -1.19
TTC39DP-201ENST00000416781 KCNMB2Q9Y691 235 aa7.61□□□□□ -1.19
TTC39DP-201ENST00000416781 UBAP1LF5GYI3 381 aa7.6□□□□□ -1.19
TTC39DP-201ENST00000416781 XYLBO75191 536 aa7.6□□□□□ -1.19
TTC39DP-201ENST00000416781 TMC7Q7Z402 723 aa7.6□□□□□ -1.19
TTC39DP-201ENST00000416781 HCN2Q9UL51 889 aa7.6□□□□□ -1.19
TTC39DP-201ENST00000416781 A6NHS1 94 aa7.6□□□□□ -1.19
TTC39DP-201ENST00000416781 EHHADHQ08426 723 aa7.6□□□□□ -1.19
TTC39DP-201ENST00000416781 SPEM2Q0P670 501 aa7.6□□□□□ -1.19
TTC39DP-201ENST00000416781 DNAJC14Q6Y2X3 702 aaPredicted RBP7.6□□□□□ -1.19
TTC39DP-201ENST00000416781 FAM129BQ96TA1 746 aa7.6□□□□□ -1.19
TTC39DP-201ENST00000416781 GGNBP2Q9H3C7 697 aa7.6□□□□□ -1.19
TTC39DP-201ENST00000416781 VSIG8P0DPA2 414 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms