RNA–Protein interactions for RNA: ENST00000416427.5

RANBP1-204, Transcript of RAN binding protein 1, human

TSL 5

Gene RANBP1, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP1-204	ENST00000416427	RIC1	Q4ADV7	1423 aa		32.72	■■■□□ 2.83
RANBP1-204	ENST00000416427	PPP1R42	Q7Z4L9	355 aa		32.72	■■■□□ 2.83
RANBP1-204	ENST00000416427	PARP10	Q53GL7	1025 aa		32.71	■■■□□ 2.83
RANBP1-204	ENST00000416427	C3orf67	Q6ZVT6	689 aa		32.71	■■■□□ 2.83
RANBP1-204	ENST00000416427	CHPF2	Q9P2E5	772 aa		32.71	■■■□□ 2.83
RANBP1-204	ENST00000416427	RTKN2	Q8IZC4	609 aa		32.7	■■■□□ 2.83
RANBP1-204	ENST00000416427	APAF1	O14727	1248 aa		32.69	■■■□□ 2.82
RANBP1-204	ENST00000416427	HDGFL1	Q5TGJ6	251 aa		32.69	■■■□□ 2.82
RANBP1-204	ENST00000416427	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.69	■■■□□ 2.82
RANBP1-204	ENST00000416427	TCERG1	O14776	1098 aa	Known RBP	32.68	■■■□□ 2.82
RANBP1-204	ENST00000416427	SLC51A	Q86UW1	340 aa		32.68	■■■□□ 2.82
RANBP1-204	ENST00000416427	DNAJC5G	Q8N7S2	189 aa		32.68	■■■□□ 2.82
RANBP1-204	ENST00000416427	ZNF428	Q96B54	188 aa		32.68	■■■□□ 2.82
RANBP1-204	ENST00000416427	UTP14A	Q9BVJ6	771 aa	Known RBP	32.68	■■■□□ 2.82
RANBP1-204	ENST00000416427	LAMB2	P55268	1798 aa		32.68	■■■□□ 2.82
RANBP1-204	ENST00000416427	SYNE4	Q8N205	404 aa		32.67	■■■□□ 2.82
RANBP1-204	ENST00000416427	HOXA10	P31260	410 aa	Predicted RBP	32.66	■■■□□ 2.82
RANBP1-204	ENST00000416427	RBM17	Q96I25	401 aa	Known RBP	32.66	■■■□□ 2.82
RANBP1-204	ENST00000416427	CFAP44	Q96MT7	982 aa		32.66	■■■□□ 2.82
RANBP1-204	ENST00000416427	MBIP	Q9NS73	344 aa		32.65	■■■□□ 2.82
RANBP1-204	ENST00000416427	IARS	P41252	1262 aa	Known RBP	32.64	■■■□□ 2.82
RANBP1-204	ENST00000416427	HSP90AB3P	Q58FF7	597 aa		32.64	■■■□□ 2.82
RANBP1-204	ENST00000416427	SNED1	Q8TER0	1413 aa		32.64	■■■□□ 2.82
RANBP1-204	ENST00000416427	NLRP3	Q96P20	1036 aa		32.64	■■■□□ 2.82
RANBP1-204	ENST00000416427	ZNF541	Q9H0D2	1346 aa		32.64	■■■□□ 2.82
RANBP1-204	ENST00000416427	PPEF1	O14829	653 aa	Predicted RBP	32.63	■■■□□ 2.81
RANBP1-204	ENST00000416427	NLRP10	Q86W26	655 aa		32.63	■■■□□ 2.81
RANBP1-204	ENST00000416427	DUSP27	Q5VZP5	1158 aa		32.62	■■■□□ 2.81
RANBP1-204	ENST00000416427	CRAMP1	Q96RY5	1269 aa		32.62	■■■□□ 2.81
RANBP1-204	ENST00000416427	SCN4A	P35499	1836 aa		32.61	■■■□□ 2.81
RANBP1-204	ENST00000416427	POTEI	P0CG38	1075 aa		32.61	■■■□□ 2.81
RANBP1-204	ENST00000416427	POTEJ	P0CG39	1038 aa		32.61	■■■□□ 2.81
RANBP1-204	ENST00000416427	TCIRG1	Q13488	830 aa		32.61	■■■□□ 2.81
RANBP1-204	ENST00000416427	HOXB7	P09629	217 aa		32.6	■■■□□ 2.81
RANBP1-204	ENST00000416427	HCLS1	P14317	486 aa	Predicted RBP	32.6	■■■□□ 2.81
RANBP1-204	ENST00000416427	CCDC184	Q52MB2	194 aa		32.6	■■■□□ 2.81
RANBP1-204	ENST00000416427	PSMD1	Q99460	953 aa		32.6	■■■□□ 2.81
RANBP1-204	ENST00000416427	SLC10A5	Q5PT55	438 aa		32.59	■■■□□ 2.81
RANBP1-204	ENST00000416427	CC2D2B	Q6DHV5	1058 aa		32.59	■■■□□ 2.81
RANBP1-204	ENST00000416427	DBF4	Q9UBU7	674 aa	Predicted RBP	32.59	■■■□□ 2.81
RANBP1-204	ENST00000416427	TRMT112	Q9UI30	125 aa	Known RBP	32.59	■■■□□ 2.81
RANBP1-204	ENST00000416427	COL4A5	P29400	1685 aa		32.58	■■■□□ 2.81
RANBP1-204	ENST00000416427	TAF1	P21675	1872 aa		32.57	■■■□□ 2.8
RANBP1-204	ENST00000416427	ZNF853	P0CG23	659 aa		32.57	■■■□□ 2.8
RANBP1-204	ENST00000416427	KLRG1	Q96E93	195 aa		32.57	■■■□□ 2.8
RANBP1-204	ENST00000416427	ABCC4	O15439	1325 aa		32.56	■■■□□ 2.8
RANBP1-204	ENST00000416427	RNF123	Q5XPI4	1314 aa		32.56	■■■□□ 2.8
RANBP1-204	ENST00000416427	ELL2	O00472	640 aa	Predicted RBP	32.56	■■■□□ 2.8
RANBP1-204	ENST00000416427	PLBD2	Q8NHP8	589 aa		32.56	■■■□□ 2.8
RANBP1-204	ENST00000416427	IFT57	Q9NWB7	429 aa		32.56	■■■□□ 2.8
RANBP1-204	ENST00000416427	DDX60	Q8IY21	1712 aa	Known RBP	32.55	■■■□□ 2.8
RANBP1-204	ENST00000416427	IQCA1L	A6NCM1	817 aa		32.55	■■■□□ 2.8
RANBP1-204	ENST00000416427	CHADL	Q6NUI6	762 aa		32.55	■■■□□ 2.8
RANBP1-204	ENST00000416427	ANKRD13D	Q6ZTN6	518 aa		32.55	■■■□□ 2.8
RANBP1-204	ENST00000416427	JDP2	Q8WYK2	163 aa		32.55	■■■□□ 2.8
RANBP1-204	ENST00000416427	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.55	■■■□□ 2.8
RANBP1-204	ENST00000416427	SH3TC1	Q8TE82	1336 aa		32.54	■■■□□ 2.8
RANBP1-204	ENST00000416427	GNAI1	P63096	354 aa		32.54	■■■□□ 2.8
RANBP1-204	ENST00000416427	CALD1	Q05682	793 aa	Known RBP	32.54	■■■□□ 2.8
RANBP1-204	ENST00000416427	ATP5J2-PTCD1	G3V325	749 aa		32.53	■■■□□ 2.8
RANBP1-204	ENST00000416427	FZD9	O00144	591 aa		32.53	■■■□□ 2.8
RANBP1-204	ENST00000416427	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.53	■■■□□ 2.8
RANBP1-204	ENST00000416427	HYPK	Q9NX55	129 aa		32.53	■■■□□ 2.8
RANBP1-204	ENST00000416427	LARGE2	Q8N3Y3	721 aa		32.52	■■■□□ 2.8
RANBP1-204	ENST00000416427	ZEB1	P37275	1124 aa	Predicted RBP	32.51	■■■□□ 2.79
RANBP1-204	ENST00000416427	EAPP	Q56P03	285 aa	Predicted RBP	32.51	■■■□□ 2.79
RANBP1-204	ENST00000416427	TMX4	Q9H1E5	349 aa	Predicted RBP	32.51	■■■□□ 2.79
RANBP1-204	ENST00000416427	ATP6V0A2	Q9Y487	856 aa		32.51	■■■□□ 2.79
RANBP1-204	ENST00000416427	PCNT	O95613	3336 aa		32.51	■■■□□ 2.79
RANBP1-204	ENST00000416427	HACL1	Q9UJ83	578 aa		32.5	■■■□□ 2.79
RANBP1-204	ENST00000416427	GJA3	Q9Y6H8	435 aa		32.5	■■■□□ 2.79
RANBP1-204	ENST00000416427	GRIPAP1	Q4V328	841 aa		32.49	■■■□□ 2.79
RANBP1-204	ENST00000416427	EIF6	P56537	245 aa	Known RBP	32.48	■■■□□ 2.79
RANBP1-204	ENST00000416427	RTL5	Q5HYW3	569 aa	Predicted RBP	32.48	■■■□□ 2.79
RANBP1-204	ENST00000416427	DDX46	Q7L014	1031 aa	Known RBP	32.48	■■■□□ 2.79
RANBP1-204	ENST00000416427	C8orf58	Q8NAV2	365 aa		32.48	■■■□□ 2.79
RANBP1-204	ENST00000416427	FAM89A	Q96GI7	184 aa		32.48	■■■□□ 2.79
RANBP1-204	ENST00000416427	ISCA1	Q9BUE6	129 aa		32.48	■■■□□ 2.79
RANBP1-204	ENST00000416427	PHAX	Q9H814	394 aa	Known RBP	32.48	■■■□□ 2.79
RANBP1-204	ENST00000416427	LDHD	Q86WU2	507 aa		32.47	■■■□□ 2.79
RANBP1-204	ENST00000416427	GPC2	Q8N158	579 aa		32.47	■■■□□ 2.79
RANBP1-204	ENST00000416427	PPIP5K2	O43314	1243 aa		32.46	■■■□□ 2.79
RANBP1-204	ENST00000416427	EPHX2	P34913	555 aa		32.46	■■■□□ 2.79
RANBP1-204	ENST00000416427	AOC3	Q16853	763 aa		32.46	■■■□□ 2.79
RANBP1-204	ENST00000416427	RIC3	Q7Z5B4	369 aa		32.45	■■■□□ 2.79
RANBP1-204	ENST00000416427	CLEC11A	Q9Y240	323 aa		32.45	■■■□□ 2.79
RANBP1-204	ENST00000416427	BBOX1	O75936	387 aa		32.44	■■■□□ 2.78
RANBP1-204	ENST00000416427	GOLGA2	Q08379	1002 aa		32.44	■■■□□ 2.78
RANBP1-204	ENST00000416427	NIM1K	Q8IY84	436 aa		32.44	■■■□□ 2.78
RANBP1-204	ENST00000416427	LTBP1	Q14766	1721 aa		32.43	■■■□□ 2.78
RANBP1-204	ENST00000416427	ADAMTSL1	Q8N6G6	1762 aa		32.43	■■■□□ 2.78
RANBP1-204	ENST00000416427	GRAP	Q13588	217 aa		32.43	■■■□□ 2.78
RANBP1-204	ENST00000416427	JMY	Q8N9B5	988 aa		32.43	■■■□□ 2.78
RANBP1-204	ENST00000416427	GRAPL	Q8TC17	118 aa	Predicted RBP	32.43	■■■□□ 2.78
RANBP1-204	ENST00000416427	TSR2	Q969E8	191 aa	Known RBP	32.43	■■■□□ 2.78
RANBP1-204	ENST00000416427	DPP8	Q6V1X1	898 aa	Predicted RBP	32.42	■■■□□ 2.78
RANBP1-204	ENST00000416427	SP8	Q8IXZ3	490 aa		32.42	■■■□□ 2.78
RANBP1-204	ENST00000416427	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.4	■■■□□ 2.78
RANBP1-204	ENST00000416427	MPND	Q8N594	471 aa		32.4	■■■□□ 2.78
RANBP1-204	ENST00000416427	TSPYL6	Q8N831	410 aa		32.4	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms