RNA–Protein interactions for RNA: ENST00000413945.5

LINC00472-201, long intergenic non-protein coding RNA 472, humanhuman

TSL 3

Gene LINC00472, Length 662 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-201ENST00000413945 PROX2Q3B8N5 592 aa8.34□□□□□ -1.07
LINC00472-201ENST00000413945 ERFEQ4G0M1 354 aa8.34□□□□□ -1.07
LINC00472-201ENST00000413945 EAPPQ56P03 285 aaPredicted RBP8.34□□□□□ -1.07
LINC00472-201ENST00000413945 NLGN1Q8N2Q7 840 aa8.34□□□□□ -1.07
LINC00472-201ENST00000413945 CCDC24Q8N4L8 307 aa8.34□□□□□ -1.07
LINC00472-201ENST00000413945 RABGEF1Q9UJ41 708 aa8.34□□□□□ -1.07
LINC00472-201ENST00000413945 NBPF1Q3BBV0 1214 aa8.33□□□□□ -1.08
LINC00472-201ENST00000413945 AKAP4Q5JQC9 854 aa8.33□□□□□ -1.08
LINC00472-201ENST00000413945 PALLDQ8WX93 1383 aa8.33□□□□□ -1.08
LINC00472-201ENST00000413945 FER1L6Q2WGJ9 1857 aa8.32□□□□□ -1.08
LINC00472-201ENST00000413945 MAP2P11137 1827 aaKnown RBP8.32□□□□□ -1.08
LINC00472-201ENST00000413945 STK25O00506 426 aa8.32□□□□□ -1.08
LINC00472-201ENST00000413945 NOGQ13253 232 aa8.32□□□□□ -1.08
LINC00472-201ENST00000413945 PNMA8AQ86V59 439 aaPredicted RBP8.32□□□□□ -1.08
LINC00472-201ENST00000413945 LRCH3Q96II8 777 aa8.32□□□□□ -1.08
LINC00472-201ENST00000413945 ARIH1Q9Y4X5 557 aaPredicted RBP8.32□□□□□ -1.08
LINC00472-201ENST00000413945 KIAA0100Q14667 2235 aaKnown RBP8.31□□□□□ -1.08
LINC00472-201ENST00000413945 EPHX2P34913 555 aa8.31□□□□□ -1.08
LINC00472-201ENST00000413945 TMF1P82094 1093 aa8.31□□□□□ -1.08
LINC00472-201ENST00000413945 KANK4Q5T7N3 995 aaPredicted RBP8.31□□□□□ -1.08
LINC00472-201ENST00000413945 FBXO46Q6PJ61 603 aaPredicted RBP8.31□□□□□ -1.08
LINC00472-201ENST00000413945 NUDT16Q96DE0 195 aaKnown RBP8.31□□□□□ -1.08
LINC00472-201ENST00000413945 PLEKHG3A1L390 1219 aa8.3□□□□□ -1.08
LINC00472-201ENST00000413945 MAP3K12Q12852 859 aa8.3□□□□□ -1.08
LINC00472-201ENST00000413945 DDX54Q8TDD1 881 aaKnown RBP8.3□□□□□ -1.08
LINC00472-201ENST00000413945 ZFRQ96KR1 1074 aaKnown RBP8.3□□□□□ -1.08
LINC00472-201ENST00000413945 RNF186Q9NXI6 227 aa8.3□□□□□ -1.08
LINC00472-201ENST00000413945 HACL1Q9UJ83 578 aa8.3□□□□□ -1.08
LINC00472-201ENST00000413945 PARP3Q9Y6F1 533 aa8.3□□□□□ -1.08
LINC00472-201ENST00000413945 LTBP3Q9NS15 1303 aa8.29□□□□□ -1.08
LINC00472-201ENST00000413945 A0A1W2PPC1 479 aa8.29□□□□□ -1.08
LINC00472-201ENST00000413945 LINC00116Q8NCU8 138 aa8.29□□□□□ -1.08
LINC00472-201ENST00000413945 ZDHHC16Q969W1 377 aa8.29□□□□□ -1.08
LINC00472-201ENST00000413945 C14orf93Q9H972 538 aaKnown RBP8.29□□□□□ -1.08
LINC00472-201ENST00000413945 POGKQ9P215 609 aa8.29□□□□□ -1.08
LINC00472-201ENST00000413945 PDZRN3Q9UPQ7 1066 aa8.29□□□□□ -1.08
LINC00472-201ENST00000413945 V9GY48 417 aaPredicted RBP8.29□□□□□ -1.08
LINC00472-201ENST00000413945 NFAT5O94916 1531 aa8.29□□□□□ -1.08
LINC00472-201ENST00000413945 TRPA1O75762 1119 aa8.28□□□□□ -1.08
LINC00472-201ENST00000413945 GYS1P13807 737 aa8.28□□□□□ -1.08
LINC00472-201ENST00000413945 LAPTM4BQ86VI4 370 aa8.28□□□□□ -1.08
LINC00472-201ENST00000413945 MTMR10Q9NXD2 777 aa8.28□□□□□ -1.08
LINC00472-201ENST00000413945 AKAP11Q9UKA4 1901 aa8.28□□□□□ -1.08
LINC00472-201ENST00000413945 TRAF5O00463 557 aa8.27□□□□□ -1.09
LINC00472-201ENST00000413945 INTS3Q68E01 1043 aaKnown RBP8.27□□□□□ -1.09
LINC00472-201ENST00000413945 DEFB123Q8N688 67 aa8.27□□□□□ -1.09
LINC00472-201ENST00000413945 FAM155AB1AL88 458 aaPredicted RBP8.26□□□□□ -1.09
LINC00472-201ENST00000413945 GNPATO15228 680 aa8.26□□□□□ -1.09
LINC00472-201ENST00000413945 EN2P19622 333 aaPredicted RBP8.26□□□□□ -1.09
LINC00472-201ENST00000413945 TREML4Q6UXN2 200 aa8.26□□□□□ -1.09
LINC00472-201ENST00000413945 COL26A1Q96A83 441 aa8.26□□□□□ -1.09
LINC00472-201ENST00000413945 TMEM265A0A087WTH1 108 aa8.25□□□□□ -1.09
LINC00472-201ENST00000413945 PPP1R3GB7ZBB8 358 aa8.25□□□□□ -1.09
LINC00472-201ENST00000413945 DDR1Q08345 913 aa8.25□□□□□ -1.09
LINC00472-201ENST00000413945 NLRP2Q9NX02 1062 aa8.25□□□□□ -1.09
LINC00472-201ENST00000413945 TAOK2Q9UL54 1235 aa8.25□□□□□ -1.09
LINC00472-201ENST00000413945 ADGRB1O14514 1584 aa8.25□□□□□ -1.09
LINC00472-201ENST00000413945 TJAP1Q5JTD0 557 aa8.24□□□□□ -1.09
LINC00472-201ENST00000413945 PPP1R18Q6NYC8 613 aa8.24□□□□□ -1.09
LINC00472-201ENST00000413945 Q7L0L9 218 aa8.24□□□□□ -1.09
LINC00472-201ENST00000413945 TTLL6Q8N841 843 aa8.24□□□□□ -1.09
LINC00472-201ENST00000413945 ZNF541Q9H0D2 1346 aa8.24□□□□□ -1.09
LINC00472-201ENST00000413945 ROCK1Q13464 1354 aa8.23□□□□□ -1.09
LINC00472-201ENST00000413945 TNFRSF10AO00220 468 aa8.23□□□□□ -1.09
LINC00472-201ENST00000413945 ZNF296Q8WUU4 475 aaPredicted RBP8.23□□□□□ -1.09
LINC00472-201ENST00000413945 IGSF5Q9NSI5 407 aa8.23□□□□□ -1.09
LINC00472-201ENST00000413945 KIAA1468Q9P260 1216 aa8.23□□□□□ -1.09
LINC00472-201ENST00000413945 RNF123Q5XPI4 1314 aa8.23□□□□□ -1.09
LINC00472-201ENST00000413945 ECM2O94769 699 aaPredicted RBP8.22□□□□□ -1.09
LINC00472-201ENST00000413945 SYMPKQ92797 1274 aaKnown RBP8.22□□□□□ -1.09
LINC00472-201ENST00000413945 P2RX7Q99572 595 aaKnown RBP8.22□□□□□ -1.09
LINC00472-201ENST00000413945 TSR3Q9UJK0 312 aaKnown RBP8.22□□□□□ -1.09
LINC00472-201ENST00000413945 NRXN2Q9P2S2 1712 aa8.22□□□□□ -1.09
LINC00472-201ENST00000413945 BAHCC1Q9P281 2608 aa8.22□□□□□ -1.09
LINC00472-201ENST00000413945 CELF2O95319 508 aaKnown RBP8.21□□□□□ -1.1
LINC00472-201ENST00000413945 SRPK2P78362 688 aaKnown RBP8.21□□□□□ -1.1
LINC00472-201ENST00000413945 KIF23Q02241 960 aaPredicted RBP8.21□□□□□ -1.1
LINC00472-201ENST00000413945 ITPK1Q13572 414 aa8.21□□□□□ -1.1
LINC00472-201ENST00000413945 NOM1Q5C9Z4 860 aaKnown RBP8.21□□□□□ -1.1
LINC00472-201ENST00000413945 CFAP70Q5T0N1 1121 aa8.21□□□□□ -1.1
LINC00472-201ENST00000413945 TRAPPC3LQ5T215 181 aa8.21□□□□□ -1.1
LINC00472-201ENST00000413945 SYNE4Q8N205 404 aa8.21□□□□□ -1.1
LINC00472-201ENST00000413945 KCNH5Q8NCM2 988 aa8.21□□□□□ -1.1
LINC00472-201ENST00000413945 ARHGEF1Q92888 912 aaKnown RBP8.21□□□□□ -1.1
LINC00472-201ENST00000413945 SMARCC1Q92922 1105 aaPredicted RBP8.21□□□□□ -1.1
LINC00472-201ENST00000413945 TAOK3Q9H2K8 898 aa8.21□□□□□ -1.1
LINC00472-201ENST00000413945 SEPT9Q9UHD8 586 aaPredicted RBP8.21□□□□□ -1.1
LINC00472-201ENST00000413945 HDAC9Q9UKV0 1011 aa8.21□□□□□ -1.1
LINC00472-201ENST00000413945 SMG6Q86US8 1419 aaKnown RBP8.2□□□□□ -1.1
LINC00472-201ENST00000413945 CACNA1GO43497 2377 aa8.2□□□□□ -1.1
LINC00472-201ENST00000413945 ALYREFQ86V81 257 aaKnown RBP8.2□□□□□ -1.1
LINC00472-201ENST00000413945 FAM208AQ9UK61 1670 aaKnown RBP8.2□□□□□ -1.1
LINC00472-201ENST00000413945 USP31Q70CQ4 1352 aa8.2□□□□□ -1.1
LINC00472-201ENST00000413945 LOC102724428A0A0B4J2F2 783 aa8.19□□□□□ -1.1
LINC00472-201ENST00000413945 POLRMTO00411 1230 aaKnown RBP8.19□□□□□ -1.1
LINC00472-201ENST00000413945 SIK1P57059 783 aa8.19□□□□□ -1.1
LINC00472-201ENST00000413945 TRIM67Q6ZTA4 783 aa8.19□□□□□ -1.1
LINC00472-201ENST00000413945 CSRNP1Q96S65 589 aa8.19□□□□□ -1.1
LINC00472-201ENST00000413945 RPTORQ8N122 1335 aa8.19□□□□□ -1.1
LINC00472-201ENST00000413945 ITGB4P16144 1822 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms