RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 GOLIM4O00461 696 aa15.85■□□□□ 0.13
SMARCA4-202ENST00000413806 PDE1AP54750 535 aa15.85■□□□□ 0.13
SMARCA4-202ENST00000413806 ALDH1L1O75891 902 aa15.85■□□□□ 0.13
SMARCA4-202ENST00000413806 TNRQ92752 1358 aa15.85■□□□□ 0.13
SMARCA4-202ENST00000413806 GOLGA6L9A6NEM1 432 aa15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 DZIP1Q86YF9 867 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 ESYT1Q9BSJ8 1104 aa15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 SEPT11Q9NVA2 429 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 WDR62O43379 1518 aa15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 KIAA0556O60303 1618 aa15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 SNRPA1P09661 255 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 CCT2P78371 535 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 MAP2K1Q02750 393 aaPredicted RBP15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 TMEM266Q2M3C6 531 aa15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 KANK3Q6NY19 840 aa15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 NCOA7Q8NI08 942 aa15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 KIF20AO95235 890 aa15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 ATP8B2P98198 1209 aa15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 SMAP1Q8IYB5 467 aaPredicted RBP15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 USP16Q9Y5T5 823 aa15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 ZPR1O75312 459 aa15.84■□□□□ 0.13
SMARCA4-202ENST00000413806 POTEB2H3BUK9 544 aa15.83■□□□□ 0.13
SMARCA4-202ENST00000413806 IARSP41252 1262 aaKnown RBP15.83■□□□□ 0.13
SMARCA4-202ENST00000413806 SLF2Q8IX21 1173 aa15.83■□□□□ 0.13
SMARCA4-202ENST00000413806 TMOD2Q9NZR1 351 aa15.83■□□□□ 0.13
SMARCA4-202ENST00000413806 ZNF518AQ6AHZ1 1483 aa15.83■□□□□ 0.13
SMARCA4-202ENST00000413806 UNC13AQ9UPW8 1703 aa15.83■□□□□ 0.13
SMARCA4-202ENST00000413806 RANBP6O60518 1105 aaKnown RBP15.83■□□□□ 0.12
SMARCA4-202ENST00000413806 KLHL10Q6JEL2 608 aa15.83■□□□□ 0.12
SMARCA4-202ENST00000413806 MEIS3Q99687 375 aa15.83■□□□□ 0.12
SMARCA4-202ENST00000413806 FOXO3O43524 673 aa15.83■□□□□ 0.12
SMARCA4-202ENST00000413806 YEATS4O95619 227 aa15.83■□□□□ 0.12
SMARCA4-202ENST00000413806 CCDC150Q8NCX0 1101 aa15.83■□□□□ 0.12
SMARCA4-202ENST00000413806 KRT28Q7Z3Y7 464 aa15.83■□□□□ 0.12
SMARCA4-202ENST00000413806 GDPD2Q9HCC8 539 aa15.83■□□□□ 0.12
SMARCA4-202ENST00000413806 GOLGA6L10A0A0M3HER8 536 aa15.82■□□□□ 0.12
SMARCA4-202ENST00000413806 CCDC194A0A1B0GVG4 234 aa15.82■□□□□ 0.12
SMARCA4-202ENST00000413806 ZNF444Q8N0Y2 327 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-202ENST00000413806 SMARCC1Q92922 1105 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-202ENST00000413806 TNIP1Q15025 636 aa15.82■□□□□ 0.12
SMARCA4-202ENST00000413806 ANKRD24Q8TF21 1146 aa15.82■□□□□ 0.12
SMARCA4-202ENST00000413806 UQCRFS1P1P0C7P4 283 aa15.82■□□□□ 0.12
SMARCA4-202ENST00000413806 NLRP5P59047 1200 aa15.82■□□□□ 0.12
SMARCA4-202ENST00000413806 KIF4BQ2VIQ3 1234 aa15.82■□□□□ 0.12
SMARCA4-202ENST00000413806 ZFYP08048 801 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-202ENST00000413806 ZNF165P49910 485 aa15.82■□□□□ 0.12
SMARCA4-202ENST00000413806 CCDC12Q8WUD4 166 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-202ENST00000413806 ORC3Q9UBD5 711 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-202ENST00000413806 GBP2P32456 591 aaPredicted RBP15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 TMEM67Q5HYA8 995 aa15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 RBM27Q9P2N5 1060 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 VPS36Q86VN1 386 aa15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 TFIP11Q9UBB9 837 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 EZRP15311 586 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 METAP2P50579 478 aaKnown RBP eCLIP15.81■□□□□ 0.129e-7■■□□□ 12.7
SMARCA4-202ENST00000413806 MPHOSPH10O00566 681 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 USO1O60763 962 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 IVLP07476 585 aa15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 KIF5BP33176 963 aa15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 TESK2Q96S53 571 aa15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 UHRF1BP1Q6BDS2 1440 aa15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 CACNA2D4Q7Z3S7 1137 aa15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 UBE3BQ7Z3V4 1068 aa15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 ZBTB3Q9H5J0 574 aa15.81■□□□□ 0.12
SMARCA4-202ENST00000413806 POTEJP0CG39 1038 aa15.8■□□□□ 0.12
SMARCA4-202ENST00000413806 TSHZ3Q63HK5 1081 aa15.8■□□□□ 0.12
SMARCA4-202ENST00000413806 DESP17661 470 aa15.8■□□□□ 0.12
SMARCA4-202ENST00000413806 TMC6Q7Z403 805 aa15.8■□□□□ 0.12
SMARCA4-202ENST00000413806 LARP6Q9BRS8 491 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-202ENST00000413806 COL17A1Q9UMD9 1497 aaPredicted RBP15.8■□□□□ 0.12
SMARCA4-202ENST00000413806 CDC5LQ99459 802 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-202ENST00000413806 NUP88Q99567 741 aaPredicted RBP15.8■□□□□ 0.12
SMARCA4-202ENST00000413806 ADAMTS12P58397 1594 aa15.8■□□□□ 0.12
SMARCA4-202ENST00000413806 UHRF1BP1LA0JNW5 1464 aa15.8■□□□□ 0.12
SMARCA4-202ENST00000413806 PAXBP1Q9Y5B6 917 aa15.8■□□□□ 0.12
SMARCA4-202ENST00000413806 AMPD3Q01432 767 aa15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 ANKRD13DQ6ZTN6 518 aa15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 TTC41PQ6P2S7 1318 aa15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 CCDC102BQ68D86 513 aa15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 LDHAL6AQ6ZMR3 332 aa15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 C8orf58Q8NAV2 365 aa15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 SOS1Q07889 1333 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 RIMS2Q9UQ26 1411 aa15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 MFSD6Q6ZSS7 791 aa15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 CHPF2Q9P2E5 772 aa15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 ANKIB1Q9P2G1 1089 aa15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 DNMT1P26358 1616 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 FAM114A1Q8IWE2 563 aa15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 CRACR2BQ8N4Y2 399 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 TRMT1Q9NXH9 659 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-202ENST00000413806 DCTPP1Q9H773 170 aa15.78■□□□□ 0.12
SMARCA4-202ENST00000413806 CCDC171Q6TFL3 1326 aa15.78■□□□□ 0.12
SMARCA4-202ENST00000413806 CETN2P41208 172 aa15.78■□□□□ 0.12
SMARCA4-202ENST00000413806 AKAP4Q5JQC9 854 aa15.78■□□□□ 0.12
SMARCA4-202ENST00000413806 CTR9Q6PD62 1173 aa15.78■□□□□ 0.12
SMARCA4-202ENST00000413806 SMC5Q8IY18 1101 aa15.78■□□□□ 0.12
SMARCA4-202ENST00000413806 TTC31Q49AM3 519 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-202ENST00000413806 CEP135Q66GS9 1140 aa15.78■□□□□ 0.12
SMARCA4-202ENST00000413806 ABCC1P33527 1531 aa15.78■□□□□ 0.12
SMARCA4-202ENST00000413806 KIF21AQ7Z4S6 1674 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms