RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 HNRNPLLQ8WVV9 542 aaKnown RBP7.41□□□□□ -1.22
CBX1P3-201ENST00000413296 CFHR5Q9BXR6 569 aa7.41□□□□□ -1.22
CBX1P3-201ENST00000413296 PNMA3Q9UL41 463 aa7.41□□□□□ -1.22
CBX1P3-201ENST00000413296 INTUQ9ULD6 942 aa7.41□□□□□ -1.22
CBX1P3-201ENST00000413296 SPG7Q9UQ90 795 aa7.41□□□□□ -1.22
CBX1P3-201ENST00000413296 R3HCC1Q9Y3T6 440 aaKnown RBP7.41□□□□□ -1.22
CBX1P3-201ENST00000413296 USP31Q70CQ4 1352 aa7.41□□□□□ -1.22
CBX1P3-201ENST00000413296 TIMM44O43615 452 aa7.4□□□□□ -1.22
CBX1P3-201ENST00000413296 IFRD2Q12894 506 aaPredicted RBP7.4□□□□□ -1.22
CBX1P3-201ENST00000413296 RETREG3Q86VR2 466 aa7.4□□□□□ -1.22
CBX1P3-201ENST00000413296 SVIPQ8NHG7 77 aa7.4□□□□□ -1.22
CBX1P3-201ENST00000413296 ENAMQ9NRM1 1142 aa7.4□□□□□ -1.22
CBX1P3-201ENST00000413296 LZTS1Q9Y250 596 aa7.4□□□□□ -1.22
CBX1P3-201ENST00000413296 GPSM3Q9Y4H4 160 aa7.4□□□□□ -1.22
CBX1P3-201ENST00000413296 PCDHGA11Q9Y5H2 935 aa7.4□□□□□ -1.22
CBX1P3-201ENST00000413296 ERBB3P21860 1342 aa7.4□□□□□ -1.22
CBX1P3-201ENST00000413296 ALG1L2C9J202 215 aa7.39□□□□□ -1.23
CBX1P3-201ENST00000413296 M0R2N6 131 aa7.39□□□□□ -1.23
CBX1P3-201ENST00000413296 ZRANB2O95218 330 aaKnown RBP eCLIP7.39□□□□□ -1.23
CBX1P3-201ENST00000413296 IGFBP4P22692 258 aa7.39□□□□□ -1.23
CBX1P3-201ENST00000413296 LRRC41Q15345 812 aa7.39□□□□□ -1.23
CBX1P3-201ENST00000413296 TMEM95Q3KNT9 176 aa7.39□□□□□ -1.23
CBX1P3-201ENST00000413296 TKFCQ3LXA3 575 aa7.39□□□□□ -1.23
CBX1P3-201ENST00000413296 MYO1HQ8N1T3 1032 aa7.39□□□□□ -1.23
CBX1P3-201ENST00000413296 GAS2L2Q8NHY3 880 aa7.39□□□□□ -1.23
CBX1P3-201ENST00000413296 TATDN2Q93075 761 aa7.39□□□□□ -1.23
CBX1P3-201ENST00000413296 NEUROD6Q96NK8 337 aa7.39□□□□□ -1.23
CBX1P3-201ENST00000413296 CCDC113Q9H0I3 377 aa7.39□□□□□ -1.23
CBX1P3-201ENST00000413296 TSKSQ9UJT2 592 aa7.39□□□□□ -1.23
CBX1P3-201ENST00000413296 STRIP2Q9ULQ0 834 aa7.39□□□□□ -1.23
CBX1P3-201ENST00000413296 CCDC163A0A0D9SF12 145 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 C3orf80F5H4A9 247 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 SCGB1D2O95969 90 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 LDHCP07864 332 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 SLC10A3P09131 477 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 PMLP29590 882 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 TRAPPC10P48553 1259 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 SLC4A3P48751 1232 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 RASSF7Q02833 373 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 PTK2Q05397 1052 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 SQSTM1Q13501 440 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 CNGB1Q14028 1251 aaPredicted RBP7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 INO80DQ53TQ3 878 aaPredicted RBP7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 KSR2Q6VAB6 950 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 C14orf80Q86SX3 495 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 IFNL3Q8IZI9 196 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 ADAM33Q9BZ11 813 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 KLF15Q9UIH9 416 aa7.38□□□□□ -1.23
CBX1P3-201ENST00000413296 SHTN1A0MZ66 631 aa7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 ESPNB1AK53 854 aa7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 KCNQ2O43526 872 aa7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 CTHP32929 405 aa7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 KCTD2Q14681 263 aa7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 TAF1CQ15572 869 aaPredicted RBP7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 C16orf46Q6P387 395 aa7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 ERMP1Q7Z2K6 904 aa7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 DRC7Q8IY82 874 aa7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 ZNF454Q8N9F8 522 aa7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 SPON2Q9BUD6 331 aa7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 FAM126AQ9BYI3 521 aaPredicted RBP7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 PPCSQ9HAB8 311 aa7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 BMP2KQ9NSY1 1161 aaPredicted RBP7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 CC2D2AQ9P2K1 1620 aa7.37□□□□□ -1.23
CBX1P3-201ENST00000413296 TCERG1O14776 1098 aaKnown RBP7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 FAM163BP0C2L3 166 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 TCEA2Q15560 299 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 GRAMD1BQ3KR37 738 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 DDX42Q86XP3 938 aaKnown RBP eCLIP7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 CHPFQ8IZ52 775 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 TEX19Q8NA77 164 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 MYRIPQ8NFW9 859 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 NKX2-3Q8TAU0 364 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 E2F7Q96AV8 911 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 CSRNP1Q96S65 589 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 SAP130Q9H0E3 1048 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 OCEL1Q9H607 264 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 COPRSQ9NQ92 184 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 PRKAG3Q9UGI9 489 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 EFR3BQ9Y2G0 817 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 LEMD3Q9Y2U8 911 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 MSRB2Q9Y3D2 182 aa7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 MRPS23Q9Y3D9 190 aaKnown RBP7.36□□□□□ -1.23
CBX1P3-201ENST00000413296 WASHC2CQ9Y4E1 1318 aa7.35□□□□□ -1.23
CBX1P3-201ENST00000413296 POU3F3P20264 500 aaPredicted RBP7.35□□□□□ -1.23
CBX1P3-201ENST00000413296 FUT2Q10981 343 aa7.35□□□□□ -1.23
CBX1P3-201ENST00000413296 MEI1Q5TIA1 1274 aa7.35□□□□□ -1.23
CBX1P3-201ENST00000413296 PDXDC2PQ6P474 469 aa7.35□□□□□ -1.23
CBX1P3-201ENST00000413296 KIAA0825Q8IV33 1275 aa7.35□□□□□ -1.23
CBX1P3-201ENST00000413296 TTC8Q8TAM2 541 aa7.35□□□□□ -1.23
CBX1P3-201ENST00000413296 CHAC2Q8WUX2 184 aa7.35□□□□□ -1.23
CBX1P3-201ENST00000413296 CDC5LQ99459 802 aaKnown RBP7.35□□□□□ -1.23
CBX1P3-201ENST00000413296 STIM2Q9P246 746 aa7.35□□□□□ -1.23
CBX1P3-201ENST00000413296 KCNG1Q9UIX4 513 aa7.35□□□□□ -1.23
CBX1P3-201ENST00000413296 CDV3Q9UKY7 258 aaKnown RBP7.35□□□□□ -1.23
CBX1P3-201ENST00000413296 A6NJY4 79 aa7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 RASGRP1O95267 797 aa7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 F12P00748 615 aaPredicted RBP7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 ST13P50502 369 aaKnown RBP7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 IRX5P78411 483 aaPredicted RBP7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 MCL1Q07820 350 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms