RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 NPHP1O15259 732 aa9.9□□□□□ -0.82
CPSF4-202ENST00000412686 NTSR2O95665 410 aa9.9□□□□□ -0.82
CPSF4-202ENST00000412686 KCNA3P22001 575 aa9.9□□□□□ -0.82
CPSF4-202ENST00000412686 FLIIQ13045 1269 aa9.9□□□□□ -0.82
CPSF4-202ENST00000412686 ERFEQ4G0M1 354 aa9.9□□□□□ -0.82
CPSF4-202ENST00000412686 NLRP10Q86W26 655 aa9.9□□□□□ -0.82
CPSF4-202ENST00000412686 SYNE4Q8N205 404 aa9.9□□□□□ -0.82
CPSF4-202ENST00000412686 MYD88Q99836 296 aa9.9□□□□□ -0.82
CPSF4-202ENST00000412686 ISCA1Q9BUE6 129 aa9.9□□□□□ -0.82
CPSF4-202ENST00000412686 MAP3K2Q9Y2U5 619 aa9.9□□□□□ -0.82
CPSF4-202ENST00000412686 CACNA1FO60840 1977 aa9.9□□□□□ -0.83
CPSF4-202ENST00000412686 SRCAPQ6ZRS2 3230 aa9.89□□□□□ -0.83
CPSF4-202ENST00000412686 LAMB2P55268 1798 aa9.89□□□□□ -0.83
CPSF4-202ENST00000412686 PI4KAP2A4QPH2 592 aa9.89□□□□□ -0.83
CPSF4-202ENST00000412686 TGFB2P61812 414 aa9.89□□□□□ -0.83
CPSF4-202ENST00000412686 ST5P78524 1137 aa9.89□□□□□ -0.83
CPSF4-202ENST00000412686 HSP90AB3PQ58FF7 597 aa9.89□□□□□ -0.83
CPSF4-202ENST00000412686 C2CD5Q86YS7 1000 aa9.89□□□□□ -0.83
CPSF4-202ENST00000412686 PI4KAP1Q8N8J0 262 aa9.89□□□□□ -0.83
CPSF4-202ENST00000412686 SSH1Q8WYL5 1049 aa9.89□□□□□ -0.83
CPSF4-202ENST00000412686 DDX60Q8IY21 1712 aaKnown RBP9.89□□□□□ -0.83
CPSF4-202ENST00000412686 SPDYE2BA6NHP3 402 aa9.88□□□□□ -0.83
CPSF4-202ENST00000412686 F6X3S4 739 aa9.88□□□□□ -0.83
CPSF4-202ENST00000412686 SPDYE6P0CI01 402 aa9.88□□□□□ -0.83
CPSF4-202ENST00000412686 GTF2E1P29083 439 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-202ENST00000412686 FKBP5Q13451 457 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-202ENST00000412686 GPR162Q16538 588 aa9.88□□□□□ -0.83
CPSF4-202ENST00000412686 SPDYE2Q495Y8 402 aa9.88□□□□□ -0.83
CPSF4-202ENST00000412686 RTL5Q5HYW3 569 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-202ENST00000412686 KSR2Q6VAB6 950 aa9.88□□□□□ -0.83
CPSF4-202ENST00000412686 TPTE2Q6XPS3 522 aa9.88□□□□□ -0.83
CPSF4-202ENST00000412686 C3orf67Q6ZVT6 689 aa9.88□□□□□ -0.83
CPSF4-202ENST00000412686 MRPL50Q8N5N7 158 aaKnown RBP9.88□□□□□ -0.83
CPSF4-202ENST00000412686 JARID2Q92833 1246 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-202ENST00000412686 METTL22Q9BUU2 404 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-202ENST00000412686 UTP14AQ9BVJ6 771 aaKnown RBP9.88□□□□□ -0.83
CPSF4-202ENST00000412686 BRIP1Q9BX63 1249 aa9.88□□□□□ -0.83
CPSF4-202ENST00000412686 IBTKQ9P2D0 1353 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-202ENST00000412686 DDX58O95786 925 aaKnown RBP9.87□□□□□ -0.83
CPSF4-202ENST00000412686 IGKV5-2P06315 115 aa9.87□□□□□ -0.83
CPSF4-202ENST00000412686 CWF19L2Q2TBE0 894 aaKnown RBP9.87□□□□□ -0.83
CPSF4-202ENST00000412686 PARP10Q53GL7 1025 aa9.87□□□□□ -0.83
CPSF4-202ENST00000412686 PPP1R42Q7Z4L9 355 aa9.87□□□□□ -0.83
CPSF4-202ENST00000412686 CHMP4AQ9BY43 222 aa9.87□□□□□ -0.83
CPSF4-202ENST00000412686 NYXQ9GZU5 481 aa9.87□□□□□ -0.83
CPSF4-202ENST00000412686 BCS1LQ9Y276 419 aa9.87□□□□□ -0.83
CPSF4-202ENST00000412686 ARFGEF1Q9Y6D6 1849 aa9.86□□□□□ -0.83
CPSF4-202ENST00000412686 HCLS1P14317 486 aaPredicted RBP9.86□□□□□ -0.83
CPSF4-202ENST00000412686 PDE6BP35913 854 aa9.86□□□□□ -0.83
CPSF4-202ENST00000412686 SLC51AQ86UW1 340 aa9.86□□□□□ -0.83
CPSF4-202ENST00000412686 ZNF622Q969S3 477 aaKnown RBP eCLIP9.86□□□□□ -0.83
CPSF4-202ENST00000412686 FAM89AQ96GI7 184 aa9.86□□□□□ -0.83
CPSF4-202ENST00000412686 YTHDC1Q96MU7 727 aaKnown RBP9.86□□□□□ -0.83
CPSF4-202ENST00000412686 TRMT112Q9UI30 125 aaKnown RBP9.86□□□□□ -0.83
CPSF4-202ENST00000412686 SLX4Q8IY92 1834 aa9.86□□□□□ -0.83
CPSF4-202ENST00000412686 COL4A1P02462 1669 aa9.86□□□□□ -0.83
CPSF4-202ENST00000412686 SH3TC1Q8TE82 1336 aa9.85□□□□□ -0.83
CPSF4-202ENST00000412686 TAF1P21675 1872 aa9.85□□□□□ -0.83
CPSF4-202ENST00000412686 NEURL1BA8MQ27 555 aa9.85□□□□□ -0.83
CPSF4-202ENST00000412686 H0YIN7 160 aa9.85□□□□□ -0.83
CPSF4-202ENST00000412686 SRGNP10124 158 aa9.85□□□□□ -0.83
CPSF4-202ENST00000412686 DNAAF4Q8WXU2 420 aa9.85□□□□□ -0.83
CPSF4-202ENST00000412686 SMC4Q9NTJ3 1288 aa9.85□□□□□ -0.83
CPSF4-202ENST00000412686 PIM2Q9P1W9 311 aa9.85□□□□□ -0.83
CPSF4-202ENST00000412686 RIC1Q4ADV7 1423 aa9.84□□□□□ -0.83
CPSF4-202ENST00000412686 KLRG2A4D1S0 409 aaPredicted RBP9.84□□□□□ -0.83
CPSF4-202ENST00000412686 RARSP54136 660 aaKnown RBP9.84□□□□□ -0.83
CPSF4-202ENST00000412686 TRIM28Q13263 835 aaKnown RBP9.84□□□□□ -0.83
CPSF4-202ENST00000412686 SLC10A5Q5PT55 438 aa9.84□□□□□ -0.83
CPSF4-202ENST00000412686 SLC4A10Q6U841 1118 aa9.84□□□□□ -0.83
CPSF4-202ENST00000412686 CWC25Q9NXE8 425 aaPredicted RBP9.84□□□□□ -0.83
CPSF4-202ENST00000412686 BCAR3O75815 825 aa9.83□□□□□ -0.84
CPSF4-202ENST00000412686 NEXNQ0ZGT2 675 aa9.83□□□□□ -0.84
CPSF4-202ENST00000412686 ALDH1L2Q3SY69 923 aa9.83□□□□□ -0.84
CPSF4-202ENST00000412686 CRY2Q49AN0 593 aa9.83□□□□□ -0.84
CPSF4-202ENST00000412686 DALRD3Q5D0E6 543 aaKnown RBP9.83□□□□□ -0.84
CPSF4-202ENST00000412686 BEND3Q5T5X7 828 aa9.83□□□□□ -0.84
CPSF4-202ENST00000412686 OLFM4Q6UX06 510 aa9.83□□□□□ -0.84
CPSF4-202ENST00000412686 TTLL6Q8N841 843 aa9.83□□□□□ -0.84
CPSF4-202ENST00000412686 ZBTB38Q8NAP3 1195 aaPredicted RBP9.83□□□□□ -0.84
CPSF4-202ENST00000412686 CCDC191Q8NCU4 936 aa9.83□□□□□ -0.84
CPSF4-202ENST00000412686 MASTLQ96GX5 879 aa9.83□□□□□ -0.84
CPSF4-202ENST00000412686 NOB1Q9ULX3 412 aaKnown RBP9.83□□□□□ -0.84
CPSF4-202ENST00000412686 TNNQ9UQP3 1299 aa9.83□□□□□ -0.84
CPSF4-202ENST00000412686 IRS4O14654 1257 aaPredicted RBP9.82□□□□□ -0.84
CPSF4-202ENST00000412686 PCCAP05165 728 aaPredicted RBP9.82□□□□□ -0.84
CPSF4-202ENST00000412686 CT47B1P0C2W7 299 aaPredicted RBP9.82□□□□□ -0.84
CPSF4-202ENST00000412686 NPR1P16066 1061 aa9.82□□□□□ -0.84
CPSF4-202ENST00000412686 STYK1Q6J9G0 422 aa9.82□□□□□ -0.84
CPSF4-202ENST00000412686 PRPF40BQ6NWY9 871 aaKnown RBP9.82□□□□□ -0.84
CPSF4-202ENST00000412686 LINS1Q8NG48 757 aa9.82□□□□□ -0.84
CPSF4-202ENST00000412686 NLRP3Q96P20 1036 aa9.82□□□□□ -0.84
CPSF4-202ENST00000412686 CCDC85AQ96PX6 553 aaPredicted RBP9.82□□□□□ -0.84
CPSF4-202ENST00000412686 RNF123Q5XPI4 1314 aa9.82□□□□□ -0.84
CPSF4-202ENST00000412686 C21orf2O43822 256 aa9.81□□□□□ -0.84
CPSF4-202ENST00000412686 CASP7P55210 303 aa9.81□□□□□ -0.84
CPSF4-202ENST00000412686 RASSF7Q02833 373 aa9.81□□□□□ -0.84
CPSF4-202ENST00000412686 GCKRQ14397 625 aa9.81□□□□□ -0.84
CPSF4-202ENST00000412686 ARHGAP27Q6ZUM4 889 aa9.81□□□□□ -0.84
CPSF4-202ENST00000412686 UBE3BQ7Z3V4 1068 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms