RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 NMIQ13287 307 aaPredicted RBP19.07■□□□□ 0.64
HOXD3-202ENST00000410016 SMC3Q9UQE7 1217 aa19.07■□□□□ 0.64
HOXD3-202ENST00000410016 CYP46A1Q9Y6A2 500 aa19.07■□□□□ 0.64
HOXD3-202ENST00000410016 SYAP1Q96A49 352 aaPredicted RBP19.07■□□□□ 0.64
HOXD3-202ENST00000410016 SIL1Q9H173 461 aa19.07■□□□□ 0.64
HOXD3-202ENST00000410016 RBM8AQ9Y5S9 174 aaKnown RBP19.07■□□□□ 0.64
HOXD3-202ENST00000410016 HIP1O00291 1037 aa19.06■□□□□ 0.64
HOXD3-202ENST00000410016 NEXNQ0ZGT2 675 aa19.06■□□□□ 0.64
HOXD3-202ENST00000410016 ST3GAL1Q11201 340 aa19.06■□□□□ 0.64
HOXD3-202ENST00000410016 CREB3L3Q68CJ9 461 aa19.06■□□□□ 0.64
HOXD3-202ENST00000410016 CNPY2Q9Y2B0 182 aa19.06■□□□□ 0.64
HOXD3-202ENST00000410016 USP16Q9Y5T5 823 aa19.06■□□□□ 0.64
HOXD3-202ENST00000410016 ALS2Q96Q42 1657 aa19.06■□□□□ 0.64
HOXD3-202ENST00000410016 TATP17735 454 aaPredicted RBP19.06■□□□□ 0.64
HOXD3-202ENST00000410016 PKNOX2Q96KN3 472 aa19.06■□□□□ 0.64
HOXD3-202ENST00000410016 ZSCAN31Q96LW9 406 aaPredicted RBP19.06■□□□□ 0.64
HOXD3-202ENST00000410016 BOLA2Q9H3K6 86 aa19.06■□□□□ 0.64
HOXD3-202ENST00000410016 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.06■□□□□ 0.64
HOXD3-202ENST00000410016 NOL7Q9UMY1 257 aaKnown RBP19.06■□□□□ 0.64
HOXD3-202ENST00000410016 KIF1AQ12756 1690 aa19.05■□□□□ 0.64
HOXD3-202ENST00000410016 MEGF6O75095 1541 aa19.05■□□□□ 0.64
HOXD3-202ENST00000410016 F13A1P00488 732 aa19.05■□□□□ 0.64
HOXD3-202ENST00000410016 COL9A3Q14050 684 aaPredicted RBP19.05■□□□□ 0.64
HOXD3-202ENST00000410016 CCDC83Q8IWF9 413 aa19.05■□□□□ 0.64
HOXD3-202ENST00000410016 IFNL2Q8IZJ0 200 aa19.05■□□□□ 0.64
HOXD3-202ENST00000410016 MYD88Q99836 296 aa19.05■□□□□ 0.64
HOXD3-202ENST00000410016 SH2B1Q9NRF2 756 aaPredicted RBP19.05■□□□□ 0.64
HOXD3-202ENST00000410016 A0A0D9SFI3 127 aa19.05■□□□□ 0.64
HOXD3-202ENST00000410016 ZKSCAN1P17029 563 aaPredicted RBP19.05■□□□□ 0.64
HOXD3-202ENST00000410016 ME3Q16798 604 aa19.05■□□□□ 0.64
HOXD3-202ENST00000410016 ANKRD13DQ6ZTN6 518 aa19.05■□□□□ 0.64
HOXD3-202ENST00000410016 RNF214Q8ND24 703 aa19.05■□□□□ 0.64
HOXD3-202ENST00000410016 TSPY26PQ9H489 355 aa19.05■□□□□ 0.64
HOXD3-202ENST00000410016 TCHHQ07283 1943 aa19.04■□□□□ 0.64
HOXD3-202ENST00000410016 C5P01031 1676 aa19.04■□□□□ 0.64
HOXD3-202ENST00000410016 SCN11AQ9UI33 1791 aa19.04■□□□□ 0.64
HOXD3-202ENST00000410016 GJB2P29033 226 aa19.04■□□□□ 0.64
HOXD3-202ENST00000410016 DDX17Q92841 729 aaKnown RBP19.04■□□□□ 0.64
HOXD3-202ENST00000410016 MRC1P22897 1456 aa19.04■□□□□ 0.64
HOXD3-202ENST00000410016 CYP27B1O15528 508 aa19.04■□□□□ 0.64
HOXD3-202ENST00000410016 SNRPA1P09661 255 aaKnown RBP19.04■□□□□ 0.64
HOXD3-202ENST00000410016 DDX54Q8TDD1 881 aaKnown RBP19.04■□□□□ 0.64
HOXD3-202ENST00000410016 COPRSQ9NQ92 184 aa19.04■□□□□ 0.64
HOXD3-202ENST00000410016 MTMR6Q9Y217 621 aa19.04■□□□□ 0.64
HOXD3-202ENST00000410016 SLC27A2O14975 620 aa19.03■□□□□ 0.64
HOXD3-202ENST00000410016 RFX5P48382 616 aaPredicted RBP19.03■□□□□ 0.64
HOXD3-202ENST00000410016 PHF14O94880 888 aa19.03■□□□□ 0.64
HOXD3-202ENST00000410016 DCAF5Q96JK2 942 aa19.03■□□□□ 0.64
HOXD3-202ENST00000410016 TPCN1Q9ULQ1 816 aa19.03■□□□□ 0.64
HOXD3-202ENST00000410016 MED23Q9ULK4 1368 aa19.02■□□□□ 0.64
HOXD3-202ENST00000410016 DTNBO60941 627 aa19.02■□□□□ 0.64
HOXD3-202ENST00000410016 MSNP26038 577 aaKnown RBP19.02■□□□□ 0.64
HOXD3-202ENST00000410016 UBE2HP62256 183 aa19.01■□□□□ 0.63
HOXD3-202ENST00000410016 PTPN12Q05209 780 aaKnown RBP19.01■□□□□ 0.63
HOXD3-202ENST00000410016 FSD1Q9BTV5 496 aa19.01■□□□□ 0.63
HOXD3-202ENST00000410016 ATP6V1DQ9Y5K8 247 aa19.01■□□□□ 0.63
HOXD3-202ENST00000410016 PIP4K2AP48426 406 aaPredicted RBP19.01■□□□□ 0.63
HOXD3-202ENST00000410016 RABL6Q3YEC7 729 aaPredicted RBP19.01■□□□□ 0.63
HOXD3-202ENST00000410016 ZNF589Q86UQ0 364 aaPredicted RBP19■□□□□ 0.63
HOXD3-202ENST00000410016 NECAB1Q8N987 351 aa19■□□□□ 0.63
HOXD3-202ENST00000410016 CABLES1Q8TDN4 633 aa19■□□□□ 0.63
HOXD3-202ENST00000410016 JARID2Q92833 1246 aaPredicted RBP19■□□□□ 0.63
HOXD3-202ENST00000410016 TAF6LQ9Y6J9 622 aa19■□□□□ 0.63
HOXD3-202ENST00000410016 COL18A1P39060 1754 aa19■□□□□ 0.63
HOXD3-202ENST00000410016 JCADQ9P266 1359 aa19■□□□□ 0.63
HOXD3-202ENST00000410016 KCNJ4P48050 445 aa19■□□□□ 0.63
HOXD3-202ENST00000410016 CCDC183Q5T5S1 534 aa19■□□□□ 0.63
HOXD3-202ENST00000410016 DBNLQ9UJU6 430 aaKnown RBP19■□□□□ 0.63
HOXD3-202ENST00000410016 COL15A1P39059 1388 aa19■□□□□ 0.63
HOXD3-202ENST00000410016 ABCC6O95255 1503 aa18.99■□□□□ 0.63
HOXD3-202ENST00000410016 ZNF500O60304 480 aaPredicted RBP18.99■□□□□ 0.63
HOXD3-202ENST00000410016 OFD1O75665 1012 aa18.99■□□□□ 0.63
HOXD3-202ENST00000410016 PSMA5P28066 241 aa18.99■□□□□ 0.63
HOXD3-202ENST00000410016 TSGA10IPQ3SY00 556 aa18.99■□□□□ 0.63
HOXD3-202ENST00000410016 EDC3Q96F86 508 aaKnown RBP18.99■□□□□ 0.63
HOXD3-202ENST00000410016 PLEKHG2Q9H7P9 1386 aa18.99■□□□□ 0.63
HOXD3-202ENST00000410016 ATF3P18847 181 aa18.99■□□□□ 0.63
HOXD3-202ENST00000410016 ATP5JP18859 108 aa18.99■□□□□ 0.63
HOXD3-202ENST00000410016 TTC5Q8N0Z6 440 aa18.99■□□□□ 0.63
HOXD3-202ENST00000410016 FMNL2Q96PY5 1086 aa18.99■□□□□ 0.63
HOXD3-202ENST00000410016 ALDH8A1Q9H2A2 487 aaPredicted RBP18.99■□□□□ 0.63
HOXD3-202ENST00000410016 TAF5LO75529 589 aa18.98■□□□□ 0.63
HOXD3-202ENST00000410016 DNM1Q05193 864 aaKnown RBP18.98■□□□□ 0.63
HOXD3-202ENST00000410016 TNNI3KQ59H18 835 aa18.98■□□□□ 0.63
HOXD3-202ENST00000410016 ZKSCAN5Q9Y2L8 839 aa18.98■□□□□ 0.63
HOXD3-202ENST00000410016 FPGT-TNNI3KV9GXZ4 949 aa18.98■□□□□ 0.63
HOXD3-202ENST00000410016 FIBPO43427 364 aa18.98■□□□□ 0.63
HOXD3-202ENST00000410016 CSB-PGBD3P0DP91 1061 aa18.98■□□□□ 0.63
HOXD3-202ENST00000410016 CASP7P55210 303 aa18.98■□□□□ 0.63
HOXD3-202ENST00000410016 CHRNA2Q15822 529 aa18.98■□□□□ 0.63
HOXD3-202ENST00000410016 TFCP2Q12800 502 aa18.97■□□□□ 0.63
HOXD3-202ENST00000410016 RNF20Q5VTR2 975 aa18.97■□□□□ 0.63
HOXD3-202ENST00000410016 USPL1Q5W0Q7 1092 aa18.97■□□□□ 0.63
HOXD3-202ENST00000410016 UBE3BQ7Z3V4 1068 aa18.97■□□□□ 0.63
HOXD3-202ENST00000410016 RPS6KB1P23443 525 aa18.97■□□□□ 0.63
HOXD3-202ENST00000410016 FAM184AQ8NB25 1140 aa18.97■□□□□ 0.63
HOXD3-202ENST00000410016 TMEM94Q12767 1356 aa18.97■□□□□ 0.63
HOXD3-202ENST00000410016 ATP5J2-PTCD1G3V325 749 aa18.96■□□□□ 0.63
HOXD3-202ENST00000410016 PTCD1O75127 700 aaKnown RBP18.96■□□□□ 0.63
HOXD3-202ENST00000410016 TOB2Q14106 344 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms