RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TRIM27P14373 513 aa20.94■□□□□ 0.94
TSPAN4-208ENST00000409531 IFFO2Q5TF58 517 aa20.94■□□□□ 0.94
TSPAN4-208ENST00000409531 FTSJ3Q8IY81 847 aaKnown RBP20.94■□□□□ 0.94
TSPAN4-208ENST00000409531 NRXN2Q9P2S2 1712 aa20.94■□□□□ 0.94
TSPAN4-208ENST00000409531 PDZRN3Q9UPQ7 1066 aa20.94■□□□□ 0.94
TSPAN4-208ENST00000409531 BCS1LQ9Y276 419 aa20.94■□□□□ 0.94
TSPAN4-208ENST00000409531 AFDNP55196 1824 aaKnown RBP20.93■□□□□ 0.94
TSPAN4-208ENST00000409531 ADCY9O60503 1353 aa20.93■□□□□ 0.94
TSPAN4-208ENST00000409531 N4BP2Q86UW6 1770 aaPredicted RBP20.93■□□□□ 0.94
TSPAN4-208ENST00000409531 H0YIN7 160 aa20.93■□□□□ 0.94
TSPAN4-208ENST00000409531 PDE6BP35913 854 aa20.93■□□□□ 0.94
TSPAN4-208ENST00000409531 ST5P78524 1137 aa20.93■□□□□ 0.94
TSPAN4-208ENST00000409531 CCDC24Q8N4L8 307 aa20.93■□□□□ 0.94
TSPAN4-208ENST00000409531 DNAAF4Q8WXU2 420 aa20.93■□□□□ 0.94
TSPAN4-208ENST00000409531 MAP3K2Q9Y2U5 619 aa20.93■□□□□ 0.94
TSPAN4-208ENST00000409531 ANKRD36CQ5JPF3 1778 aa20.92■□□□□ 0.94
TSPAN4-208ENST00000409531 PLIN1O60240 522 aa20.92■□□□□ 0.94
TSPAN4-208ENST00000409531 NEXNQ0ZGT2 675 aa20.92■□□□□ 0.94
TSPAN4-208ENST00000409531 HSP90AB3PQ58FF7 597 aa20.92■□□□□ 0.94
TSPAN4-208ENST00000409531 C2CD5Q86YS7 1000 aa20.92■□□□□ 0.94
TSPAN4-208ENST00000409531 DZIP1LQ8IYY4 767 aaKnown RBP20.92■□□□□ 0.94
TSPAN4-208ENST00000409531 ZNF34Q8IZ26 560 aa20.92■□□□□ 0.94
TSPAN4-208ENST00000409531 PDE3AQ14432 1141 aa20.91■□□□□ 0.94
TSPAN4-208ENST00000409531 DALRD3Q5D0E6 543 aaKnown RBP20.91■□□□□ 0.94
TSPAN4-208ENST00000409531 ABCC4O15439 1325 aa20.91■□□□□ 0.94
TSPAN4-208ENST00000409531 KIAA1551Q9HCM1 1747 aa20.9■□□□□ 0.94
TSPAN4-208ENST00000409531 FAM177BA6PVY3 158 aa20.9■□□□□ 0.94
TSPAN4-208ENST00000409531 F6X3S4 739 aa20.9■□□□□ 0.94
TSPAN4-208ENST00000409531 GPTP24298 496 aa20.9■□□□□ 0.94
TSPAN4-208ENST00000409531 METTL22Q9BUU2 404 aaPredicted RBP20.9■□□□□ 0.94
TSPAN4-208ENST00000409531 NYXQ9GZU5 481 aa20.9■□□□□ 0.94
TSPAN4-208ENST00000409531 ATP10DQ9P241 1426 aa20.9■□□□□ 0.94
TSPAN4-208ENST00000409531 GTF2E1P29083 439 aaPredicted RBP20.89■□□□□ 0.93
TSPAN4-208ENST00000409531 SLC4A10Q6U841 1118 aa20.89■□□□□ 0.93
TSPAN4-208ENST00000409531 CLUAP1Q96AJ1 413 aa20.89■□□□□ 0.93
TSPAN4-208ENST00000409531 CCT4P50991 539 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-208ENST00000409531 TCIRG1Q13488 830 aa20.88■□□□□ 0.93
TSPAN4-208ENST00000409531 PARP10Q53GL7 1025 aa20.87■□□□□ 0.93
TSPAN4-208ENST00000409531 SUSD4Q5VX71 490 aa20.87■□□□□ 0.93
TSPAN4-208ENST00000409531 TTLL6Q8N841 843 aa20.87■□□□□ 0.93
TSPAN4-208ENST00000409531 LINS1Q8NG48 757 aa20.87■□□□□ 0.93
TSPAN4-208ENST00000409531 INTS3Q68E01 1043 aaKnown RBP20.86■□□□□ 0.93
TSPAN4-208ENST00000409531 PPP1R42Q7Z4L9 355 aa20.86■□□□□ 0.93
TSPAN4-208ENST00000409531 MYD88Q99836 296 aa20.86■□□□□ 0.93
TSPAN4-208ENST00000409531 SRCIN1Q9C0H9 1055 aa20.86■□□□□ 0.93
TSPAN4-208ENST00000409531 UBN2Q6ZU65 1347 aa20.86■□□□□ 0.93
TSPAN4-208ENST00000409531 KLRG2A4D1S0 409 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-208ENST00000409531 ALDH1L1O75891 902 aa20.85■□□□□ 0.93
TSPAN4-208ENST00000409531 SRGNP10124 158 aa20.85■□□□□ 0.93
TSPAN4-208ENST00000409531 BEND3Q5T5X7 828 aa20.85■□□□□ 0.93
TSPAN4-208ENST00000409531 ARHGAP27Q6ZUM4 889 aa20.85■□□□□ 0.93
TSPAN4-208ENST00000409531 ZNF622Q969S3 477 aaKnown RBP eCLIP20.85■□□□□ 0.93
TSPAN4-208ENST00000409531 NUTM1Q86Y26 1132 aa20.84■□□□□ 0.93
TSPAN4-208ENST00000409531 TNNQ9UQP3 1299 aa20.84■□□□□ 0.93
TSPAN4-208ENST00000409531 IBTKQ9P2D0 1353 aaPredicted RBP20.83■□□□□ 0.93
TSPAN4-208ENST00000409531 RLBP1P12271 317 aa20.83■□□□□ 0.93
TSPAN4-208ENST00000409531 TRIM28Q13263 835 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-208ENST00000409531 ERFEQ4G0M1 354 aa20.83■□□□□ 0.93
TSPAN4-208ENST00000409531 STYK1Q6J9G0 422 aa20.83■□□□□ 0.93
TSPAN4-208ENST00000409531 TMEM57Q8N5G2 664 aa20.83■□□□□ 0.93
TSPAN4-208ENST00000409531 PANK1Q8TE04 598 aa20.83■□□□□ 0.93
TSPAN4-208ENST00000409531 MASTLQ96GX5 879 aa20.83■□□□□ 0.93
TSPAN4-208ENST00000409531 UTP14AQ9BVJ6 771 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-208ENST00000409531 NTSR2O95665 410 aa20.82■□□□□ 0.92
TSPAN4-208ENST00000409531 NLRP10Q86W26 655 aa20.82■□□□□ 0.92
TSPAN4-208ENST00000409531 ITPRIPQ8IWB1 547 aa20.82■□□□□ 0.92
TSPAN4-208ENST00000409531 CCDC191Q8NCU4 936 aa20.82■□□□□ 0.92
TSPAN4-208ENST00000409531 CNKSR1Q969H4 720 aa20.82■□□□□ 0.92
TSPAN4-208ENST00000409531 ISCA1Q9BUE6 129 aa20.82■□□□□ 0.92
TSPAN4-208ENST00000409531 CHMP4BQ9H444 224 aaKnown RBP20.82■□□□□ 0.92
TSPAN4-208ENST00000409531 BRCA1P38398 1863 aaKnown RBP20.82■□□□□ 0.92
TSPAN4-208ENST00000409531 ANKRD31Q8N7Z5 1873 aa20.81■□□□□ 0.92
TSPAN4-208ENST00000409531 NEURL1BA8MQ27 555 aa20.81■□□□□ 0.92
TSPAN4-208ENST00000409531 ATP5J2-PTCD1G3V325 749 aa20.81■□□□□ 0.92
TSPAN4-208ENST00000409531 IGKV5-2P06315 115 aa20.81■□□□□ 0.92
TSPAN4-208ENST00000409531 NEFLP07196 543 aa20.81■□□□□ 0.92
TSPAN4-208ENST00000409531 MVPQ14764 893 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-208ENST00000409531 C20orf194Q5TEA3 1177 aa20.81■□□□□ 0.92
TSPAN4-208ENST00000409531 NPR1P16066 1061 aa20.8■□□□□ 0.92
TSPAN4-208ENST00000409531 SLC10A5Q5PT55 438 aa20.8■□□□□ 0.92
TSPAN4-208ENST00000409531 CWC25Q9NXE8 425 aaPredicted RBP20.8■□□□□ 0.92
TSPAN4-208ENST00000409531 DDX19BQ9UMR2 479 aa20.8■□□□□ 0.92
TSPAN4-208ENST00000409531 CWF19L2Q2TBE0 894 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-208ENST00000409531 COG6Q9Y2V7 657 aa20.79■□□□□ 0.92
TSPAN4-208ENST00000409531 GCKRQ14397 625 aa20.78■□□□□ 0.92
TSPAN4-208ENST00000409531 TRMT112Q9UI30 125 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-208ENST00000409531 CRY2Q49AN0 593 aa20.78■□□□□ 0.92
TSPAN4-208ENST00000409531 NLRP3Q96P20 1036 aa20.78■□□□□ 0.92
TSPAN4-208ENST00000409531 C9orf78Q9NZ63 289 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-208ENST00000409531 HDAC5Q9UQL6 1122 aa20.78■□□□□ 0.92
TSPAN4-208ENST00000409531 ABCC12Q96J65 1359 aa20.77■□□□□ 0.92
TSPAN4-208ENST00000409531 ALDH1B1P30837 517 aa20.77■□□□□ 0.91
TSPAN4-208ENST00000409531 ARFGEF1Q9Y6D6 1849 aa20.76■□□□□ 0.91
TSPAN4-208ENST00000409531 GRM8O00222 908 aa20.76■□□□□ 0.91
TSPAN4-208ENST00000409531 C21orf2O43822 256 aa20.76■□□□□ 0.91
TSPAN4-208ENST00000409531 GNAI3P08754 354 aa20.76■□□□□ 0.91
TSPAN4-208ENST00000409531 PRPF40BQ6NWY9 871 aaKnown RBP20.76■□□□□ 0.91
TSPAN4-208ENST00000409531 SH3TC1Q8TE82 1336 aa20.75■□□□□ 0.91
TSPAN4-208ENST00000409531 DLEC1Q9Y238 1755 aa20.75■□□□□ 0.91
TSPAN4-208ENST00000409531 RIC1Q4ADV7 1423 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms