RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 SH3TC1Q8TE82 1336 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 LAMA5O15230 3695 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 CHD9Q3L8U1 2897 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TNS1Q9HBL0 1735 aaKnown RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 MARF1Q9Y4F3 1742 aaKnown RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 GLI2P10070 1586 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FAT3Q8TDW7 4589 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 USP6P35125 1406 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SNED1Q8TER0 1413 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 KMT2AQ03164 3969 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TMEM8BA6NDV4 472 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TRPA1O75762 1119 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FAM155BO75949 473 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 NADKO95544 446 aaPredicted RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 KRTAP2-3P0C7H8 128 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 POTEIP0CG38 1075 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 POTEJP0CG39 1038 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SDHBP21912 280 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ITPKBP27987 946 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SSTR3P32745 418 aaPredicted RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PTGS2P35354 604 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 NBL1P41271 181 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 CSRP3P50461 194 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 BRPF1P55201 1214 aaPredicted RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 KHDRBS1Q07666 443 aaKnown RBP eCLIP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PROX2Q3B8N5 592 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 AKAP4Q5JQC9 854 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 LCE2DQ5TA82 110 aaPredicted RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ARHGAP27Q6ZUM4 889 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 CDAN1Q8IWY9 1227 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SUGP1Q8IWZ8 645 aaKnown RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SHISA5Q8N114 240 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 CRIPAKQ8N1N5 446 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FNBP4Q8N3X1 1017 aaPredicted RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 HNRNPLLQ8WVV9 542 aaKnown RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 MOCOSQ96EN8 888 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TNIP3Q96KP6 325 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SLC4A9Q96Q91 983 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ARID3AQ99856 593 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 GDF15Q99988 308 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 HTATIP2Q9BUP3 242 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TMEM106CQ9BVX2 250 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 KRTAP2-4Q9BYR9 128 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PLA2G2FQ9BZM2 168 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 UBE2OQ9C0C9 1292 aaKnown RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 GRIP2Q9C0E4 1043 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TSPYL2Q9H2G4 693 aaPredicted RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TTYH1Q9H313 450 aaPredicted RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 AVENQ9NQS1 362 aaPredicted RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FBXO28Q9NVF7 368 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 STK32BQ9NY57 414 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 GGA3Q9NZ52 723 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PLA2G2EQ9NZK7 142 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 CXXC1Q9P0U4 656 aaPredicted RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 CDV3Q9UKY7 258 aaKnown RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ADAMTS8Q9UP79 889 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 CCDC9Q9Y3X0 531 aaKnown RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 GPSM3Q9Y4H4 160 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 MAFBQ9Y5Q3 323 aaPredicted RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ARAP3Q8WWN8 1544 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ARHGEF17Q96PE2 2063 aaPredicted RBP0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 MSH6P52701 1360 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PLEKHG2Q9H7P9 1386 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 STAB2Q8WWQ8 2551 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SHROOM2Q13796 1616 aa0.42□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FANCAO15360 1455 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PLA2R1Q13018 1463 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 LRRC9Q6ZRR7 1453 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 NRXN1Q9ULB1 1477 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 RAPGEF2Q9Y4G8 1499 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PLXNA3P51805 1871 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TRPM3Q9HCF6 1732 aaPredicted RBP0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ASTN2O75129 1339 aaPredicted RBP0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PASKQ96RG2 1323 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SYNMO15061 1565 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 EIF4G3O43432 1585 aaKnown RBP0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ABCA8O94911 1581 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 RIF1Q5UIP0 2472 aaKnown RBP0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FMN1Q68DA7 1419 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TRAPPC8Q9Y2L5 1435 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TNRC6CQ9HCJ0 1690 aaKnown RBP0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SPTA1P02549 2419 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 POTEB3A0JP26 581 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 TK2O00142 265 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 AXIN1O15169 862 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 DCXO43602 365 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SLC28A2O43868 658 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 EVI5O60447 810 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SEC24BO95487 1268 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 MYCP01106 439 aaPredicted RBP0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 CR2P20023 1033 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 LORP23490 312 aaPredicted RBP0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 PMLP29590 882 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 FOXK1P85037 733 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SHC2P98077 582 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 ZNF252P-AS1Q0IIN9 211 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 UBAP2LQ14157 1087 aaKnown RBP0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 NBR1Q14596 966 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 CCDC6Q16204 474 aa0.41□□□□□ -2.34
RNU6ATAC11P-201ENST00000408541 SLC4A8Q2Y0W8 1093 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms