RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 CRY2Q49AN0 593 aa16.32■□□□□ 0.2
APOBEC3B-204ENST00000407298 RPGRQ92834 1020 aaKnown RBP16.32■□□□□ 0.2
APOBEC3B-204ENST00000407298 BEGAINQ9BUH8 593 aa16.32■□□□□ 0.2
APOBEC3B-204ENST00000407298 TMX4Q9H1E5 349 aaPredicted RBP16.32■□□□□ 0.2
APOBEC3B-204ENST00000407298 GJA3Q9Y6H8 435 aa16.32■□□□□ 0.2
APOBEC3B-204ENST00000407298 ECE1P42892 770 aa16.31■□□□□ 0.2
APOBEC3B-204ENST00000407298 KIF6Q6ZMV9 814 aa16.31■□□□□ 0.2
APOBEC3B-204ENST00000407298 DDX21Q9NR30 783 aaKnown RBP eCLIP16.31■□□□□ 0.2
APOBEC3B-204ENST00000407298 HOXA10P31260 410 aaPredicted RBP16.3■□□□□ 0.2
APOBEC3B-204ENST00000407298 LARGE2Q8N3Y3 721 aa16.3■□□□□ 0.2
APOBEC3B-204ENST00000407298 RBM17Q96I25 401 aaKnown RBP16.3■□□□□ 0.2
APOBEC3B-204ENST00000407298 ADAMTSL1Q8N6G6 1762 aa16.29■□□□□ 0.2
APOBEC3B-204ENST00000407298 HSPA8P11142 646 aaKnown RBP16.29■□□□□ 0.2
APOBEC3B-204ENST00000407298 DCTN1Q14203 1278 aa16.29■□□□□ 0.2
APOBEC3B-204ENST00000407298 USP50Q70EL3 339 aaPredicted RBP16.29■□□□□ 0.2
APOBEC3B-204ENST00000407298 CRAMP1Q96RY5 1269 aa16.29■□□□□ 0.2
APOBEC3B-204ENST00000407298 VPS33BQ9H267 617 aa16.29■□□□□ 0.2
APOBEC3B-204ENST00000407298 MAP3K15Q6ZN16 1313 aa16.28■□□□□ 0.2
APOBEC3B-204ENST00000407298 NUTM1Q86Y26 1132 aa16.28■□□□□ 0.2
APOBEC3B-204ENST00000407298 NGEFQ8N5V2 710 aa16.28■□□□□ 0.2
APOBEC3B-204ENST00000407298 IBTKQ9P2D0 1353 aaPredicted RBP16.27■□□□□ 0.2
APOBEC3B-204ENST00000407298 PAXIP1Q6ZW49 1069 aaPredicted RBP16.27■□□□□ 0.2
APOBEC3B-204ENST00000407298 NIM1KQ8IY84 436 aa16.27■□□□□ 0.2
APOBEC3B-204ENST00000407298 ABHD8Q96I13 439 aa16.27■□□□□ 0.2
APOBEC3B-204ENST00000407298 PPP2R1AP30153 589 aa16.26■□□□□ 0.19
APOBEC3B-204ENST00000407298 PPP1R42Q7Z4L9 355 aa16.26■□□□□ 0.19
APOBEC3B-204ENST00000407298 CAPNS2Q96L46 248 aa16.26■□□□□ 0.19
APOBEC3B-204ENST00000407298 GPR101Q96P66 508 aaPredicted RBP16.26■□□□□ 0.19
APOBEC3B-204ENST00000407298 MIS18AQ9NYP9 233 aa16.26■□□□□ 0.19
APOBEC3B-204ENST00000407298 RRP7AQ9Y3A4 280 aaKnown RBP16.26■□□□□ 0.19
APOBEC3B-204ENST00000407298 RIC1Q4ADV7 1423 aa16.26■□□□□ 0.19
APOBEC3B-204ENST00000407298 PPEF1O14829 653 aaPredicted RBP16.25■□□□□ 0.19
APOBEC3B-204ENST00000407298 EPS15P42566 896 aa16.25■□□□□ 0.19
APOBEC3B-204ENST00000407298 SCNN1DP51172 638 aa16.25■□□□□ 0.19
APOBEC3B-204ENST00000407298 SUPT20HQ8NEM7 779 aa16.25■□□□□ 0.19
APOBEC3B-204ENST00000407298 NLRP3Q96P20 1036 aa16.25■□□□□ 0.19
APOBEC3B-204ENST00000407298 SNED1Q8TER0 1413 aa16.25■□□□□ 0.19
APOBEC3B-204ENST00000407298 ABCC12Q96J65 1359 aa16.25■□□□□ 0.19
APOBEC3B-204ENST00000407298 MAP2K2P36507 400 aa16.24■□□□□ 0.19
APOBEC3B-204ENST00000407298 PARP10Q53GL7 1025 aa16.24■□□□□ 0.19
APOBEC3B-204ENST00000407298 ADARB2Q9NS39 739 aaKnown RBP16.24■□□□□ 0.19
APOBEC3B-204ENST00000407298 PPIP5K2O43314 1243 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 CA12O43570 354 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 MYL6BP14649 208 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 GPTP24298 496 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 EIF4A1P60842 406 aaKnown RBP16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 SUSD4Q5VX71 490 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 TTLL7Q6ZT98 887 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 ZNF34Q8IZ26 560 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 PNNQ9H307 717 aaKnown RBP16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 TLL2Q9Y6L7 1015 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 ERBB4Q15303 1308 aa16.22■□□□□ 0.19
APOBEC3B-204ENST00000407298 GRM1Q13255 1194 aa16.22■□□□□ 0.19
APOBEC3B-204ENST00000407298 CYP4F22Q6NT55 531 aa16.22■□□□□ 0.19
APOBEC3B-204ENST00000407298 GIGYF2Q6Y7W6 1299 aaKnown RBP16.22■□□□□ 0.19
APOBEC3B-204ENST00000407298 ZBTB3Q9H5J0 574 aa16.22■□□□□ 0.19
APOBEC3B-204ENST00000407298 ATP6V0A2Q9Y487 856 aa16.22■□□□□ 0.19
APOBEC3B-204ENST00000407298 NUP98P52948 1817 aa16.22■□□□□ 0.19
APOBEC3B-204ENST00000407298 UBN2Q6ZU65 1347 aa16.21■□□□□ 0.19
APOBEC3B-204ENST00000407298 LAMB4A4D0S4 1761 aa16.21■□□□□ 0.19
APOBEC3B-204ENST00000407298 TCERG1O14776 1098 aaKnown RBP16.21■□□□□ 0.19
APOBEC3B-204ENST00000407298 NTSR2O95665 410 aa16.21■□□□□ 0.19
APOBEC3B-204ENST00000407298 CST9Q5W186 159 aa16.21■□□□□ 0.19
APOBEC3B-204ENST00000407298 GPRC5DQ9NZD1 345 aa16.21■□□□□ 0.19
APOBEC3B-204ENST00000407298 ZNRF3Q9ULT6 936 aa16.21■□□□□ 0.19
APOBEC3B-204ENST00000407298 BBOX1O75936 387 aa16.2■□□□□ 0.18
APOBEC3B-204ENST00000407298 HHIPL1Q96JK4 782 aa16.2■□□□□ 0.18
APOBEC3B-204ENST00000407298 UTP14AQ9BVJ6 771 aaKnown RBP16.2■□□□□ 0.18
APOBEC3B-204ENST00000407298 CDHR2Q9BYE9 1310 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 TRPM7Q96QT4 1865 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 CCDC85CA6NKD9 419 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 TRAF5O00463 557 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 TNIP1Q15025 636 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 AOC3Q16853 763 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 FAM161AQ3B820 660 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 SLC10A5Q5PT55 438 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 ZC3H15Q8WU90 426 aaKnown RBP16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 RTFDC1Q9BY42 306 aaPredicted RBP16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 CELF2O95319 508 aaKnown RBP16.18■□□□□ 0.18
APOBEC3B-204ENST00000407298 MLLT1Q03111 559 aaPredicted RBP16.18■□□□□ 0.18
APOBEC3B-204ENST00000407298 FMR1Q06787 632 aaKnown RBP eCLIP16.18■□□□□ 0.18
APOBEC3B-204ENST00000407298 CXCL9Q07325 125 aa16.18■□□□□ 0.18
APOBEC3B-204ENST00000407298 NFE2L2Q16236 605 aa16.18■□□□□ 0.18
APOBEC3B-204ENST00000407298 DPP8Q6V1X1 898 aaPredicted RBP16.18■□□□□ 0.18
APOBEC3B-204ENST00000407298 COL4A5P29400 1685 aa16.18■□□□□ 0.18
APOBEC3B-204ENST00000407298 LTBP1Q14766 1721 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 HSP90AB3PQ58FF7 597 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 CIAPIN1Q6FI81 312 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 SAPCD2Q86UD0 394 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 SP8Q8IXZ3 490 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 MPNDQ8N594 471 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 PGAP2Q9UHJ9 254 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 MAPK8IP3Q9UPT6 1336 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 THSD7BQ9C0I4 1608 aa16.16■□□□□ 0.18
APOBEC3B-204ENST00000407298 AOC2O75106 756 aa16.16■□□□□ 0.18
APOBEC3B-204ENST00000407298 RGS19P49795 217 aa16.16■□□□□ 0.18
APOBEC3B-204ENST00000407298 GMPSP49915 693 aaPredicted RBP16.16■□□□□ 0.18
APOBEC3B-204ENST00000407298 BRPF1P55201 1214 aaPredicted RBP16.16■□□□□ 0.18
APOBEC3B-204ENST00000407298 CDC37L1Q7L3B6 337 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms