RNA–Protein interactions for RNA: ENST00000406076.5

CLHC1-203, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLHC1, Length 1,777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-203ENST00000406076 NUTM2EB1AL46 878 aaPredicted RBP6.52□□□□□ -1.37
CLHC1-203ENST00000406076 PIK3CDO00329 1044 aa6.52□□□□□ -1.37
CLHC1-203ENST00000406076 SNRPBP14678 240 aaKnown RBP6.52□□□□□ -1.37
CLHC1-203ENST00000406076 HSD3B2P26439 372 aa6.52□□□□□ -1.37
CLHC1-203ENST00000406076 ZNF211Q13398 564 aaPredicted RBP6.52□□□□□ -1.37
CLHC1-203ENST00000406076 RNF187Q5TA31 235 aaPredicted RBP6.52□□□□□ -1.37
CLHC1-203ENST00000406076 NUTM2DQ5VT03 806 aaPredicted RBP6.52□□□□□ -1.37
CLHC1-203ENST00000406076 NUTM2AQ8IVF1 878 aaPredicted RBP6.52□□□□□ -1.37
CLHC1-203ENST00000406076 TMEM87AQ8NBN3 555 aa6.52□□□□□ -1.37
CLHC1-203ENST00000406076 GMLQ99445 158 aa6.52□□□□□ -1.37
CLHC1-203ENST00000406076 TGIF2Q9GZN2 237 aa6.52□□□□□ -1.37
CLHC1-203ENST00000406076 MAF1Q9H063 256 aa6.52□□□□□ -1.37
CLHC1-203ENST00000406076 ANO2Q9NQ90 1003 aa6.52□□□□□ -1.37
CLHC1-203ENST00000406076 PRR12Q9ULL5 1215 aa6.52□□□□□ -1.37
CLHC1-203ENST00000406076 HMGB1P1B2RPK0 211 aaPredicted RBP6.51□□□□□ -1.37
CLHC1-203ENST00000406076 H3BRB1 525 aa6.51□□□□□ -1.37
CLHC1-203ENST00000406076 ABL1P00519 1130 aa6.51□□□□□ -1.37
CLHC1-203ENST00000406076 TSHZ1Q6ZSZ6 1077 aa6.51□□□□□ -1.37
CLHC1-203ENST00000406076 FILIP1Q7Z7B0 1213 aa6.51□□□□□ -1.37
CLHC1-203ENST00000406076 TUT1Q9H6E5 874 aaKnown RBP6.51□□□□□ -1.37
CLHC1-203ENST00000406076 MLH3Q9UHC1 1453 aa6.51□□□□□ -1.37
CLHC1-203ENST00000406076 SAMD9Q5K651 1589 aa6.51□□□□□ -1.37
CLHC1-203ENST00000406076 MROH2AA6NES4 1674 aa6.51□□□□□ -1.37
CLHC1-203ENST00000406076 KIDINS220Q9ULH0 1771 aa6.51□□□□□ -1.37
CLHC1-203ENST00000406076 CDK13Q14004 1512 aaKnown RBP6.5□□□□□ -1.37
CLHC1-203ENST00000406076 ZNF518AQ6AHZ1 1483 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L15C9J2P7 530 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L10C9JJH3 530 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L13C9JLJ4 530 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L12C9JPN9 530 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L11C9JVI0 530 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L21D6R901 530 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L18D6R9N7 530 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L22D6RA61 530 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L17D6RBQ6 530 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L19D6RCP7 530 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L20D6RJB6 530 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 CTDSPL2Q05D32 466 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L24Q0WX57 530 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 KCNH2Q12809 1159 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 LINC01559Q495D7 138 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 DESI1Q6ICB0 168 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 FAM43BQ6ZT52 329 aaPredicted RBP6.5□□□□□ -1.37
CLHC1-203ENST00000406076 EPS8L1Q8TE68 723 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 BAP1Q92560 729 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 TRIM47Q96LD4 638 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 OSBPL2Q9H1P3 480 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 CCSER2Q9H7U1 834 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 RPS6KL1Q9Y6S9 549 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 LRP6O75581 1613 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 CNTLNQ9NXG0 1405 aa6.5□□□□□ -1.37
CLHC1-203ENST00000406076 CLTCQ00610 1675 aaKnown RBP6.5□□□□□ -1.37
CLHC1-203ENST00000406076 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.49□□□□□ -1.37
CLHC1-203ENST00000406076 FAM196BA6NMK8 535 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 GJA5P36382 358 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 TBX4P57082 545 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 RHBDL3P58872 404 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 COL19A1Q14993 1142 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 ECM1Q16610 540 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 FAM161BQ96MY7 647 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 SENP2Q9HC62 589 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 POLR1AO95602 1720 aaPredicted RBP6.49□□□□□ -1.37
CLHC1-203ENST00000406076 EP400Q96L91 3159 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 A2ML1A8K2U0 1454 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 PRXQ9BXM0 1461 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L3A6NCW0 530 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L4A6NCW7 530 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 WFS1O76024 890 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 FANCCQ00597 558 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 NFX1Q12986 1120 aaKnown RBP6.49□□□□□ -1.37
CLHC1-203ENST00000406076 C4orf46Q504U0 113 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 EFCAB2Q5VUJ9 269 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L2Q6R6M4 530 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 CLEC4GQ6UXB4 293 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 USP17L1Q7RTZ2 530 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 FMNL3Q8IVF7 1028 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 DDX56Q9NY93 547 aaKnown RBP6.49□□□□□ -1.37
CLHC1-203ENST00000406076 DCTN4Q9UJW0 460 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 WASF2Q9Y6W5 498 aa6.49□□□□□ -1.37
CLHC1-203ENST00000406076 CFAP99D6REC4 459 aa6.48□□□□□ -1.37
CLHC1-203ENST00000406076 ZNF511Q8NB15 262 aa6.48□□□□□ -1.37
CLHC1-203ENST00000406076 ESF1Q9H501 851 aaKnown RBP6.48□□□□□ -1.37
CLHC1-203ENST00000406076 FAM135BQ49AJ0 1406 aa6.48□□□□□ -1.37
CLHC1-203ENST00000406076 MED14O60244 1454 aa6.48□□□□□ -1.37
CLHC1-203ENST00000406076 KIF14Q15058 1648 aa6.48□□□□□ -1.37
CLHC1-203ENST00000406076 RNF17Q9BXT8 1623 aaKnown RBP6.48□□□□□ -1.37
CLHC1-203ENST00000406076 ICMTO60725 284 aa6.47□□□□□ -1.37
CLHC1-203ENST00000406076 S100BP04271 92 aaPredicted RBP6.47□□□□□ -1.37
CLHC1-203ENST00000406076 PTK7Q13308 1070 aa6.47□□□□□ -1.37
CLHC1-203ENST00000406076 BIRC2Q13490 618 aa6.47□□□□□ -1.37
CLHC1-203ENST00000406076 C11orf96Q7Z7L8 435 aa6.47□□□□□ -1.37
CLHC1-203ENST00000406076 ZSCAN29Q8IWY8 852 aaPredicted RBP6.47□□□□□ -1.37
CLHC1-203ENST00000406076 CCAR1Q8IX12 1150 aaKnown RBP6.47□□□□□ -1.37
CLHC1-203ENST00000406076 FAM200AQ8TCP9 573 aa6.47□□□□□ -1.37
CLHC1-203ENST00000406076 LRRN4Q8WUT4 740 aa6.47□□□□□ -1.37
CLHC1-203ENST00000406076 RPS6KC1Q96S38 1066 aa6.47□□□□□ -1.37
CLHC1-203ENST00000406076 EGFL7Q9UHF1 273 aa6.47□□□□□ -1.37
CLHC1-203ENST00000406076 TLL2Q9Y6L7 1015 aa6.47□□□□□ -1.37
CLHC1-203ENST00000406076 P4HBP07237 508 aaKnown RBP6.46□□□□□ -1.37
CLHC1-203ENST00000406076 BMP1P13497 986 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms