RNA–Protein interactions for RNA: ENST00000405943.3

HDGFP1-201, Transcript of heparin binding growth factor pseudogene 1, humanhuman

BASIC

Gene HDGFP1, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP1-201ENST00000405943 UBXN4Q92575 508 aa5.3□□□□□ -1.56
HDGFP1-201ENST00000405943 SIRT1Q96EB6 747 aa5.3□□□□□ -1.56
HDGFP1-201ENST00000405943 ZNF396Q96N95 335 aaPredicted RBP5.3□□□□□ -1.56
HDGFP1-201ENST00000405943 EFCC1Q9HA90 598 aa5.3□□□□□ -1.56
HDGFP1-201ENST00000405943 ECHDC1Q9NTX5 307 aa5.3□□□□□ -1.56
HDGFP1-201ENST00000405943 CCDC61Q9Y6R9 512 aa5.3□□□□□ -1.56
HDGFP1-201ENST00000405943 CHD1O14646 1710 aa5.3□□□□□ -1.56
HDGFP1-201ENST00000405943 PHLPP2Q6ZVD8 1323 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 PNMA6EA0A0J9YXQ4 647 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 GOLGA6L9A6NEM1 432 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 ERICH4A6NGS2 130 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 F6X3S4 739 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 TULP2O00295 520 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 IFIT2P09913 472 aaKnown RBP5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 H2AFXP16104 143 aaPredicted RBP5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 LIG1P18858 919 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 SFPQP23246 707 aaKnown RBP eCLIP5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 HDGFP51858 240 aaKnown RBP5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 POLA2Q14181 598 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 EIF4A2Q14240 407 aaKnown RBP5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 RRS1Q15050 365 aaKnown RBP5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 ELF2Q15723 593 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 ME3Q16798 604 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 JAKMIP3Q5VZ66 844 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 PRPF40BQ6NWY9 871 aaKnown RBP5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 NUTM1Q86Y26 1132 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 UNC5CLQ8IV45 518 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 RASEFQ8IZ41 740 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 LLPHQ9BRT6 129 aaKnown RBP5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 DNAJC25Q9H1X3 360 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 L2HGDHQ9H9P8 463 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 IL1RAPL2Q9NP60 686 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 NRBP1Q9UHY1 535 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 CHMP3Q9Y3E7 222 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 NRKQ7Z2Y5 1582 aa5.29□□□□□ -1.56
HDGFP1-201ENST00000405943 ALKQ9UM73 1620 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 SRGAP3O43295 1099 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 ZSCAN12O43309 604 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 CBFA2T2O43439 604 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 MYO1BO43795 1136 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 HMGB1P09429 215 aaKnown RBP5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 NECTIN1Q15223 517 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 ARHGAP29Q52LW3 1261 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 MUM1L1Q5H9M0 696 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 CCDC158Q5M9N0 1113 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 CREB3L3Q68CJ9 461 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 NAA16Q6N069 864 aaPredicted RBP5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 PLPPR3Q6T4P5 718 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 CDC37L1Q7L3B6 337 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 PPP1R42Q7Z4L9 355 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 FCHSD1Q86WN1 690 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 HOMER1Q86YM7 354 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 NUDT16Q96DE0 195 aaKnown RBP5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 BPIFA3Q9BQP9 254 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 USP44Q9H0E7 712 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 OSBPL5Q9H0X9 879 aaPredicted RBP5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 RASSF4Q9H2L5 321 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 TPCN1Q9ULQ1 816 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 SPG7Q9UQ90 795 aa5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 RBM8AQ9Y5S9 174 aaKnown RBP5.28□□□□□ -1.56
HDGFP1-201ENST00000405943 NEO1Q92859 1461 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 GNAT3A8MTJ3 354 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 EFCAB8A8MWE9 144 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 POTEB2H3BUK9 544 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 NR1I2O75469 434 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 EIF3JO75822 258 aaKnown RBP5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 MAP4K4O95819 1239 aaPredicted RBP5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 IVLP07476 585 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 HOXB7P09629 217 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 PNMA6AP0CW24 399 aaPredicted RBP5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 HSP90B1P14625 803 aaKnown RBP5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 RPS6KB1P23443 525 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 CCZ1BP86790 482 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 CCZ1P86791 482 aaPredicted RBP5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 FAM160A1Q05DH4 1040 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 IQCB1Q15051 598 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 LRRFIP1Q32MZ4 808 aaKnown RBP5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 CCDC144BQ3MJ40 725 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 TSGA10IPQ3SY00 556 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 TAF7LQ5H9L4 462 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 G2E3Q7L622 706 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 FERMT3Q86UX7 667 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 CCAR1Q8IX12 1150 aaKnown RBP5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 CCDC144CPQ8IYA2 1237 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 GOLGA5Q8TBA6 731 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 MAP4K1Q92918 833 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 DNAJC5Q9H3Z4 198 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 SNRKQ9NRH2 765 aa5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.27□□□□□ -1.57
HDGFP1-201ENST00000405943 SPATA31D1Q6ZQQ2 1576 aa5.26□□□□□ -1.57
HDGFP1-201ENST00000405943 SLC27A2O14975 620 aa5.26□□□□□ -1.57
HDGFP1-201ENST00000405943 ERLIN1O75477 346 aa5.26□□□□□ -1.57
HDGFP1-201ENST00000405943 SMC2O95347 1197 aa5.26□□□□□ -1.57
HDGFP1-201ENST00000405943 LARGE1O95461 756 aa5.26□□□□□ -1.57
HDGFP1-201ENST00000405943 TUBBP07437 444 aa5.26□□□□□ -1.57
HDGFP1-201ENST00000405943 FBLN1P23142 703 aa5.26□□□□□ -1.57
HDGFP1-201ENST00000405943 CLCN6P51797 869 aa5.26□□□□□ -1.57
HDGFP1-201ENST00000405943 ETF1P62495 437 aaKnown RBP5.26□□□□□ -1.57
HDGFP1-201ENST00000405943 IRX3P78415 501 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms