RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 CWF19L2Q2TBE0 894 aaKnown RBP27.66■■■□□ 2.02
EPCAM-202ENST00000405271 NARFQ9UHQ1 456 aa27.66■■■□□ 2.02
EPCAM-202ENST00000405271 GNAI3P08754 354 aa27.65■■■□□ 2.02
EPCAM-202ENST00000405271 ISCA1Q9BUE6 129 aa27.65■■■□□ 2.02
EPCAM-202ENST00000405271 PPP4R2Q9NY27 417 aa27.65■■■□□ 2.02
EPCAM-202ENST00000405271 HLFQ16534 295 aa27.64■■■□□ 2.02
EPCAM-202ENST00000405271 KLHL34Q8N239 644 aa27.64■■■□□ 2.02
EPCAM-202ENST00000405271 MEIS3Q99687 375 aa27.64■■■□□ 2.02
EPCAM-202ENST00000405271 USP42Q9H9J4 1324 aaKnown RBP27.64■■■□□ 2.01
EPCAM-202ENST00000405271 GOLGB1Q14789 3259 aaKnown RBP27.63■■■□□ 2.01
EPCAM-202ENST00000405271 RFC4P35249 363 aa27.63■■■□□ 2.01
EPCAM-202ENST00000405271 CLEC4GQ6UXB4 293 aa27.63■■■□□ 2.01
EPCAM-202ENST00000405271 CCDC191Q8NCU4 936 aa27.63■■■□□ 2.01
EPCAM-202ENST00000405271 TRIM28Q13263 835 aaKnown RBP27.62■■■□□ 2.01
EPCAM-202ENST00000405271 USP44Q9H0E7 712 aa27.62■■■□□ 2.01
EPCAM-202ENST00000405271 ATP5J2-PTCD1G3V325 749 aa27.62■■■□□ 2.01
EPCAM-202ENST00000405271 ZPR1O75312 459 aa27.62■■■□□ 2.01
EPCAM-202ENST00000405271 GCKRQ14397 625 aa27.62■■■□□ 2.01
EPCAM-202ENST00000405271 CWC25Q9NXE8 425 aaPredicted RBP27.62■■■□□ 2.01
EPCAM-202ENST00000405271 UTYO14607 1347 aa27.61■■■□□ 2.01
EPCAM-202ENST00000405271 DDX60Q8IY21 1712 aaKnown RBP27.61■■■□□ 2.01
EPCAM-202ENST00000405271 GRM8O00222 908 aa27.61■■■□□ 2.01
EPCAM-202ENST00000405271 C9orf78Q9NZ63 289 aaPredicted RBP27.61■■■□□ 2.01
EPCAM-202ENST00000405271 HDAC5Q9UQL6 1122 aa27.6■■■□□ 2.01
EPCAM-202ENST00000405271 DCAF8L1A6NGE4 600 aa27.59■■■□□ 2.01
EPCAM-202ENST00000405271 UBTFL1P0CB47 393 aaPredicted RBP27.59■■■□□ 2.01
EPCAM-202ENST00000405271 ZNF34Q8IZ26 560 aa27.59■■■□□ 2.01
EPCAM-202ENST00000405271 NLGN1Q8N2Q7 840 aa27.59■■■□□ 2.01
EPCAM-202ENST00000405271 GYS1P13807 737 aa27.58■■■□□ 2.01
EPCAM-202ENST00000405271 USPL1Q5W0Q7 1092 aa27.58■■■□□ 2.01
EPCAM-202ENST00000405271 NLGN2Q8NFZ4 835 aa27.57■■■□□ 2
EPCAM-202ENST00000405271 GNAI2P04899 355 aa27.57■■■□□ 2
EPCAM-202ENST00000405271 MMP10P09238 476 aa27.57■■■□□ 2
EPCAM-202ENST00000405271 PARP10Q53GL7 1025 aa27.57■■■□□ 2
EPCAM-202ENST00000405271 SRP68Q9UHB9 627 aaKnown RBP27.57■■■□□ 2
EPCAM-202ENST00000405271 NBPF7P0C2Y1 421 aaPredicted RBP27.56■■■□□ 2
EPCAM-202ENST00000405271 NLRP10Q86W26 655 aa27.56■■■□□ 2
EPCAM-202ENST00000405271 BCL2L12Q9HB09 334 aa27.56■■■□□ 2
EPCAM-202ENST00000405271 CD2APQ9Y5K6 639 aa27.55■■■□□ 2
EPCAM-202ENST00000405271 UBN2Q6ZU65 1347 aa27.55■■■□□ 2
EPCAM-202ENST00000405271 GPTP24298 496 aa27.54■■■□□ 2
EPCAM-202ENST00000405271 CCDC136Q96JN2 1154 aa27.54■■■□□ 2
EPCAM-202ENST00000405271 C1orf115Q9H7X2 142 aa27.54■■■□□ 2
EPCAM-202ENST00000405271 NIP7Q9Y221 180 aaKnown RBP eCLIP27.53■■■□□ 2
EPCAM-202ENST00000405271 PCDHB15Q9Y5E8 787 aa27.53■■■□□ 2
EPCAM-202ENST00000405271 NRXN2Q9P2S2 1712 aa27.52■■■□□ 2
EPCAM-202ENST00000405271 H7C1W4 665 aa27.52■■■□□ 2
EPCAM-202ENST00000405271 PCCAP05165 728 aaPredicted RBP27.51■■■□□ 2
EPCAM-202ENST00000405271 UBE3BQ7Z3V4 1068 aa27.51■■■□□ 2
EPCAM-202ENST00000405271 LRRFIP2Q9Y608 721 aaKnown RBP27.51■■■□□ 2
EPCAM-202ENST00000405271 CASP7P55210 303 aa27.51■■□□□ 1.99
EPCAM-202ENST00000405271 RPAP2Q8IXW5 612 aaPredicted RBP27.51■■□□□ 1.99
EPCAM-202ENST00000405271 ZBTB38Q8NAP3 1195 aaPredicted RBP27.51■■□□□ 1.99
EPCAM-202ENST00000405271 CDHR2Q9BYE9 1310 aa27.5■■□□□ 1.99
EPCAM-202ENST00000405271 PPP1R42Q7Z4L9 355 aa27.5■■□□□ 1.99
EPCAM-202ENST00000405271 TBC1D9BQ66K14 1250 aa27.49■■□□□ 1.99
EPCAM-202ENST00000405271 CARMIL3Q8ND23 1372 aa27.48■■□□□ 1.99
EPCAM-202ENST00000405271 B4GALNT3Q6L9W6 998 aa27.48■■□□□ 1.99
EPCAM-202ENST00000405271 CEP85Q6P2H3 762 aa27.48■■□□□ 1.99
EPCAM-202ENST00000405271 ANKRD44Q8N8A2 993 aa27.48■■□□□ 1.99
EPCAM-202ENST00000405271 SUCLG2Q96I99 432 aa27.47■■□□□ 1.99
EPCAM-202ENST00000405271 SETDB2Q96T68 719 aa27.47■■□□□ 1.99
EPCAM-202ENST00000405271 HDAC1Q13547 482 aaPredicted RBP27.46■■□□□ 1.99
EPCAM-202ENST00000405271 GPR162Q16538 588 aa27.46■■□□□ 1.99
EPCAM-202ENST00000405271 SUSD4Q5VX71 490 aa27.46■■□□□ 1.99
EPCAM-202ENST00000405271 UTP14AQ9BVJ6 771 aaKnown RBP27.46■■□□□ 1.99
EPCAM-202ENST00000405271 TRMT112Q9UI30 125 aaKnown RBP27.46■■□□□ 1.99
EPCAM-202ENST00000405271 NTSR2O95665 410 aa27.46■■□□□ 1.99
EPCAM-202ENST00000405271 PARP3Q9Y6F1 533 aa27.46■■□□□ 1.99
EPCAM-202ENST00000405271 SH3TC1Q8TE82 1336 aa27.45■■□□□ 1.98
EPCAM-202ENST00000405271 NYXQ9GZU5 481 aa27.45■■□□□ 1.98
EPCAM-202ENST00000405271 RWDD1Q9H446 243 aaPredicted RBP27.45■■□□□ 1.98
EPCAM-202ENST00000405271 TM4SF1P30408 202 aa27.44■■□□□ 1.98
EPCAM-202ENST00000405271 MTX1Q13505 466 aa27.44■■□□□ 1.98
EPCAM-202ENST00000405271 BICDL1Q6ZP65 573 aa27.44■■□□□ 1.98
EPCAM-202ENST00000405271 KAZALD1Q96I82 304 aa27.44■■□□□ 1.98
EPCAM-202ENST00000405271 PLA2G12BQ9BX93 195 aa27.44■■□□□ 1.98
EPCAM-202ENST00000405271 SPEF2Q9C093 1822 aa27.44■■□□□ 1.98
EPCAM-202ENST00000405271 HMMRO75330 724 aa27.43■■□□□ 1.98
EPCAM-202ENST00000405271 FAM89AQ96GI7 184 aa27.43■■□□□ 1.98
EPCAM-202ENST00000405271 HSP90B1P14625 803 aaKnown RBP27.42■■□□□ 1.98
EPCAM-202ENST00000405271 ATP8B2P98198 1209 aa27.42■■□□□ 1.98
EPCAM-202ENST00000405271 NFIXQ14938 502 aa27.42■■□□□ 1.98
EPCAM-202ENST00000405271 PELP1Q8IZL8 1130 aaKnown RBP27.42■■□□□ 1.98
EPCAM-202ENST00000405271 BICC1Q9H694 974 aaKnown RBP27.42■■□□□ 1.98
EPCAM-202ENST00000405271 TNRC6CQ9HCJ0 1690 aaKnown RBP27.42■■□□□ 1.98
EPCAM-202ENST00000405271 ANKRD31Q8N7Z5 1873 aa27.42■■□□□ 1.98
EPCAM-202ENST00000405271 DDR1Q08345 913 aa27.41■■□□□ 1.98
EPCAM-202ENST00000405271 RABL6Q3YEC7 729 aaPredicted RBP27.41■■□□□ 1.98
EPCAM-202ENST00000405271 SIRT2Q8IXJ6 389 aa27.41■■□□□ 1.98
EPCAM-202ENST00000405271 JARID2Q92833 1246 aaPredicted RBP27.41■■□□□ 1.98
EPCAM-202ENST00000405271 KDM2BQ8NHM5 1336 aa27.41■■□□□ 1.98
EPCAM-202ENST00000405271 RTL5Q5HYW3 569 aaPredicted RBP27.41■■□□□ 1.98
EPCAM-202ENST00000405271 CENPQQ7L2Z9 268 aaPredicted RBP27.41■■□□□ 1.98
EPCAM-202ENST00000405271 RIC1Q4ADV7 1423 aa27.4■■□□□ 1.98
EPCAM-202ENST00000405271 IRS4O14654 1257 aaPredicted RBP27.39■■□□□ 1.98
EPCAM-202ENST00000405271 YBX3P16989 372 aaKnown RBP eCLIP27.39■■□□□ 1.982e-6■■□□□ 11.4
EPCAM-202ENST00000405271 NBPF5PQ86XG9 351 aaPredicted RBP27.39■■□□□ 1.98
EPCAM-202ENST00000405271 FAM177BA6PVY3 158 aa27.38■■□□□ 1.97
EPCAM-202ENST00000405271 POLRMTO00411 1230 aaKnown RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms