RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 AIMP1Q12904 312 aaKnown RBP23.04■■□□□ 1.28
THUMPD2-202ENST00000403537 MYH16Q9H6N6 1097 aa23.04■■□□□ 1.28
THUMPD2-202ENST00000403537 COL11A2P13942 1736 aaPredicted RBP23.04■■□□□ 1.28
THUMPD2-202ENST00000403537 UBN2Q6ZU65 1347 aa23.04■■□□□ 1.28
THUMPD2-202ENST00000403537 E9PSI1 815 aa23.03■■□□□ 1.28
THUMPD2-202ENST00000403537 CRY2Q49AN0 593 aa23.03■■□□□ 1.28
THUMPD2-202ENST00000403537 SUSD4Q5VX71 490 aa23.03■■□□□ 1.28
THUMPD2-202ENST00000403537 UTP14AQ9BVJ6 771 aaKnown RBP23.03■■□□□ 1.28
THUMPD2-202ENST00000403537 TAOK3Q9H2K8 898 aa23.03■■□□□ 1.28
THUMPD2-202ENST00000403537 ZBED9Q6R2W3 1325 aa23.03■■□□□ 1.28
THUMPD2-202ENST00000403537 NUP98P52948 1817 aa23.03■■□□□ 1.28
THUMPD2-202ENST00000403537 NTSR2O95665 410 aa23.02■■□□□ 1.28
THUMPD2-202ENST00000403537 ERFEQ4G0M1 354 aa23.02■■□□□ 1.28
THUMPD2-202ENST00000403537 CCDC93Q567U6 631 aa23.02■■□□□ 1.28
THUMPD2-202ENST00000403537 NUTM1Q86Y26 1132 aa23.02■■□□□ 1.28
THUMPD2-202ENST00000403537 ZNF219Q9P2Y4 722 aaPredicted RBP23.02■■□□□ 1.28
THUMPD2-202ENST00000403537 TCIRG1Q13488 830 aa23.01■■□□□ 1.27
THUMPD2-202ENST00000403537 PLBD2Q8NHP8 589 aa23.01■■□□□ 1.27
THUMPD2-202ENST00000403537 RPGRQ92834 1020 aaKnown RBP23.01■■□□□ 1.27
THUMPD2-202ENST00000403537 TCERG1O14776 1098 aaKnown RBP23■■□□□ 1.27
THUMPD2-202ENST00000403537 KIF3CO14782 793 aa23■■□□□ 1.27
THUMPD2-202ENST00000403537 TWISTNBQ3B726 338 aaPredicted RBP23■■□□□ 1.27
THUMPD2-202ENST00000403537 TRMT2AQ8IZ69 625 aaKnown RBP23■■□□□ 1.27
THUMPD2-202ENST00000403537 RTKN2Q8IZC4 609 aa23■■□□□ 1.27
THUMPD2-202ENST00000403537 C7orf43Q8WVR3 580 aa23■■□□□ 1.27
THUMPD2-202ENST00000403537 YTHDC1Q96MU7 727 aaKnown RBP23■■□□□ 1.27
THUMPD2-202ENST00000403537 ABCC12Q96J65 1359 aa23■■□□□ 1.27
THUMPD2-202ENST00000403537 HOXA10P31260 410 aaPredicted RBP22.99■■□□□ 1.27
THUMPD2-202ENST00000403537 GRIPAP1Q4V328 841 aa22.99■■□□□ 1.27
THUMPD2-202ENST00000403537 CC2D2BQ6DHV5 1058 aa22.99■■□□□ 1.27
THUMPD2-202ENST00000403537 ANKRD13DQ6ZTN6 518 aa22.99■■□□□ 1.27
THUMPD2-202ENST00000403537 RBM17Q96I25 401 aaKnown RBP22.99■■□□□ 1.27
THUMPD2-202ENST00000403537 NLRP3Q96P20 1036 aa22.99■■□□□ 1.27
THUMPD2-202ENST00000403537 SLC10A5Q5PT55 438 aa22.98■■□□□ 1.27
THUMPD2-202ENST00000403537 C16orf71Q8IYS4 520 aaPredicted RBP22.98■■□□□ 1.27
THUMPD2-202ENST00000403537 ARFGEF2Q9Y6D5 1785 aa22.97■■□□□ 1.27
THUMPD2-202ENST00000403537 TOMM70O94826 608 aa22.97■■□□□ 1.27
THUMPD2-202ENST00000403537 CCDC30Q5VVM6 783 aa22.97■■□□□ 1.27
THUMPD2-202ENST00000403537 DPY19L2Q6NUT2 758 aa22.97■■□□□ 1.27
THUMPD2-202ENST00000403537 NLRP10Q86W26 655 aa22.97■■□□□ 1.27
THUMPD2-202ENST00000403537 CRAMP1Q96RY5 1269 aa22.97■■□□□ 1.27
THUMPD2-202ENST00000403537 SBF1O95248 1867 aa22.96■■□□□ 1.27
THUMPD2-202ENST00000403537 GLTPD2A6NH11 291 aa22.96■■□□□ 1.27
THUMPD2-202ENST00000403537 VAMP4O75379 141 aa22.96■■□□□ 1.27
THUMPD2-202ENST00000403537 NMRK2Q9NPI5 230 aa22.96■■□□□ 1.27
THUMPD2-202ENST00000403537 PRELPP51888 382 aa22.95■■□□□ 1.26
THUMPD2-202ENST00000403537 FKBP4Q02790 459 aaKnown RBP eCLIP22.95■■□□□ 1.26
THUMPD2-202ENST00000403537 SLX4Q8IY92 1834 aa22.95■■□□□ 1.26
THUMPD2-202ENST00000403537 TMX4Q9H1E5 349 aaPredicted RBP22.95■■□□□ 1.26
THUMPD2-202ENST00000403537 TRMT112Q9UI30 125 aaKnown RBP22.95■■□□□ 1.26
THUMPD2-202ENST00000403537 SH3TC1Q8TE82 1336 aa22.94■■□□□ 1.26
THUMPD2-202ENST00000403537 DDX58O95786 925 aaKnown RBP22.93■■□□□ 1.26
THUMPD2-202ENST00000403537 TRIM28Q13263 835 aaKnown RBP22.93■■□□□ 1.26
THUMPD2-202ENST00000403537 FER1L6Q2WGJ9 1857 aa22.93■■□□□ 1.26
THUMPD2-202ENST00000403537 RIC3Q7Z5B4 369 aa22.92■■□□□ 1.26
THUMPD2-202ENST00000403537 RBM46Q8TBY0 533 aaKnown RBP22.92■■□□□ 1.26
THUMPD2-202ENST00000403537 HSP90B1P14625 803 aaKnown RBP22.91■■□□□ 1.26
THUMPD2-202ENST00000403537 VEGFAP15692 232 aaPredicted RBP22.91■■□□□ 1.26
THUMPD2-202ENST00000403537 PSMD1Q99460 953 aa22.91■■□□□ 1.26
THUMPD2-202ENST00000403537 ISCA1Q9BUE6 129 aa22.91■■□□□ 1.26
THUMPD2-202ENST00000403537 STK31Q9BXU1 1019 aa22.91■■□□□ 1.26
THUMPD2-202ENST00000403537 TNRC6CQ9HCJ0 1690 aaKnown RBP22.9■■□□□ 1.26
THUMPD2-202ENST00000403537 HSPA6P17066 643 aa22.9■■□□□ 1.26
THUMPD2-202ENST00000403537 PHAXQ9H814 394 aaKnown RBP22.9■■□□□ 1.26
THUMPD2-202ENST00000403537 RRAGCQ9HB90 399 aa22.9■■□□□ 1.26
THUMPD2-202ENST00000403537 ANKRD36CQ5JPF3 1778 aa22.89■■□□□ 1.26
THUMPD2-202ENST00000403537 PPEF1O14829 653 aaPredicted RBP22.89■■□□□ 1.25
THUMPD2-202ENST00000403537 BBOX1O75936 387 aa22.88■■□□□ 1.25
THUMPD2-202ENST00000403537 FSTL1Q12841 308 aa22.88■■□□□ 1.25
THUMPD2-202ENST00000403537 DDX46Q7L014 1031 aaKnown RBP22.88■■□□□ 1.25
THUMPD2-202ENST00000403537 G2E3Q7L622 706 aa22.88■■□□□ 1.25
THUMPD2-202ENST00000403537 SYNE4Q8N205 404 aa22.87■■□□□ 1.25
THUMPD2-202ENST00000403537 TIAM2Q8IVF5 1701 aa22.86■■□□□ 1.25
THUMPD2-202ENST00000403537 HCLS1P14317 486 aaPredicted RBP22.86■■□□□ 1.25
THUMPD2-202ENST00000403537 IARSP41252 1262 aaKnown RBP22.86■■□□□ 1.25
THUMPD2-202ENST00000403537 C3orf67Q6ZVT6 689 aa22.86■■□□□ 1.25
THUMPD2-202ENST00000403537 TMC4Q7Z404 712 aa22.86■■□□□ 1.25
THUMPD2-202ENST00000403537 ZNF277Q9NRM2 450 aaPredicted RBP22.86■■□□□ 1.25
THUMPD2-202ENST00000403537 CACNA1SQ13698 1873 aa22.85■■□□□ 1.25
THUMPD2-202ENST00000403537 ATP5J2-PTCD1G3V325 749 aa22.85■■□□□ 1.25
THUMPD2-202ENST00000403537 CCDC191Q8NCU4 936 aa22.85■■□□□ 1.25
THUMPD2-202ENST00000403537 BCL2L13Q9BXK5 485 aa22.85■■□□□ 1.25
THUMPD2-202ENST00000403537 ATP6V0A2Q9Y487 856 aa22.85■■□□□ 1.25
THUMPD2-202ENST00000403537 SLC4A2P04920 1241 aa22.84■■□□□ 1.25
THUMPD2-202ENST00000403537 OLFM4Q6UX06 510 aa22.84■■□□□ 1.25
THUMPD2-202ENST00000403537 JDP2Q8WYK2 163 aa22.84■■□□□ 1.25
THUMPD2-202ENST00000403537 VPS33BQ9H267 617 aa22.84■■□□□ 1.25
THUMPD2-202ENST00000403537 DICER1Q9UPY3 1922 aaKnown RBP22.84■■□□□ 1.25
THUMPD2-202ENST00000403537 ABCC4O15439 1325 aa22.83■■□□□ 1.25
THUMPD2-202ENST00000403537 ZBTB38Q8NAP3 1195 aaPredicted RBP22.83■■□□□ 1.25
THUMPD2-202ENST00000403537 SMC1BQ8NDV3 1235 aa22.83■■□□□ 1.25
THUMPD2-202ENST00000403537 SUPT20HQ8NEM7 779 aa22.83■■□□□ 1.25
THUMPD2-202ENST00000403537 SSH1Q8WYL5 1049 aa22.83■■□□□ 1.25
THUMPD2-202ENST00000403537 FAM89AQ96GI7 184 aa22.83■■□□□ 1.25
THUMPD2-202ENST00000403537 CACNA1FO60840 1977 aa22.83■■□□□ 1.24
THUMPD2-202ENST00000403537 CCDC88AQ3V6T2 1871 aa22.82■■□□□ 1.24
THUMPD2-202ENST00000403537 IQCA1LA6NCM1 817 aa22.82■■□□□ 1.24
THUMPD2-202ENST00000403537 APLP1P51693 650 aa22.82■■□□□ 1.24
THUMPD2-202ENST00000403537 GRAPQ13588 217 aa22.82■■□□□ 1.24
THUMPD2-202ENST00000403537 SP8Q8IXZ3 490 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms