RNA–Protein interactions for RNA: ENST00000402271.5

HDAC11-203, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-203ENST00000402271 DDX21Q9NR30 783 aaKnown RBP eCLIP25.29■■□□□ 1.64
HDAC11-203ENST00000402271 DDNO94850 711 aaPredicted RBP25.28■■□□□ 1.64
HDAC11-203ENST00000402271 HOXB7P09629 217 aa25.28■■□□□ 1.64
HDAC11-203ENST00000402271 CC2D2BQ6DHV5 1058 aa25.28■■□□□ 1.64
HDAC11-203ENST00000402271 NECTIN2Q92692 538 aa25.28■■□□□ 1.64
HDAC11-203ENST00000402271 LAS1LQ9Y4W2 734 aaKnown RBP25.28■■□□□ 1.64
HDAC11-203ENST00000402271 HSP90AB3PQ58FF7 597 aa25.27■■□□□ 1.64
HDAC11-203ENST00000402271 SLC10A5Q5PT55 438 aa25.27■■□□□ 1.64
HDAC11-203ENST00000402271 XAGE3Q8WTP9 111 aa25.27■■□□□ 1.64
HDAC11-203ENST00000402271 CFAP44Q96MT7 982 aa25.27■■□□□ 1.64
HDAC11-203ENST00000402271 CRAMP1Q96RY5 1269 aa25.27■■□□□ 1.64
HDAC11-203ENST00000402271 PSMD1Q99460 953 aa25.27■■□□□ 1.64
HDAC11-203ENST00000402271 ZNF277Q9NRM2 450 aaPredicted RBP25.27■■□□□ 1.64
HDAC11-203ENST00000402271 RNF123Q5XPI4 1314 aa25.27■■□□□ 1.64
HDAC11-203ENST00000402271 UTP14AQ9BVJ6 771 aaKnown RBP25.26■■□□□ 1.63
HDAC11-203ENST00000402271 SYNE4Q8N205 404 aa25.25■■□□□ 1.63
HDAC11-203ENST00000402271 RBM17Q96I25 401 aaKnown RBP25.25■■□□□ 1.63
HDAC11-203ENST00000402271 L3MBTL3Q96JM7 780 aaPredicted RBP25.25■■□□□ 1.63
HDAC11-203ENST00000402271 IARSP41252 1262 aaKnown RBP25.24■■□□□ 1.63
HDAC11-203ENST00000402271 HTRA3P83110 453 aa25.24■■□□□ 1.63
HDAC11-203ENST00000402271 AIMP1Q12904 312 aaKnown RBP25.24■■□□□ 1.63
HDAC11-203ENST00000402271 GRIPAP1Q4V328 841 aa25.24■■□□□ 1.63
HDAC11-203ENST00000402271 C3orf67Q6ZVT6 689 aa25.24■■□□□ 1.63
HDAC11-203ENST00000402271 NLRP3Q96P20 1036 aa25.24■■□□□ 1.63
HDAC11-203ENST00000402271 CHPF2Q9P2E5 772 aa25.24■■□□□ 1.63
HDAC11-203ENST00000402271 TCIRG1Q13488 830 aa25.23■■□□□ 1.63
HDAC11-203ENST00000402271 HDGFL1Q5TGJ6 251 aa25.23■■□□□ 1.63
HDAC11-203ENST00000402271 NLRP10Q86W26 655 aa25.23■■□□□ 1.63
HDAC11-203ENST00000402271 KLRG1Q96E93 195 aa25.23■■□□□ 1.63
HDAC11-203ENST00000402271 SCN4AP35499 1836 aa25.23■■□□□ 1.63
HDAC11-203ENST00000402271 IQCA1LA6NCM1 817 aa25.22■■□□□ 1.63
HDAC11-203ENST00000402271 ZNF853P0CG23 659 aa25.22■■□□□ 1.63
HDAC11-203ENST00000402271 ZNF541Q9H0D2 1346 aa25.21■■□□□ 1.63
HDAC11-203ENST00000402271 FZD9O00144 591 aa25.21■■□□□ 1.63
HDAC11-203ENST00000402271 APAF1O14727 1248 aa25.21■■□□□ 1.63
HDAC11-203ENST00000402271 MBIPQ9NS73 344 aa25.21■■□□□ 1.63
HDAC11-203ENST00000402271 DBF4Q9UBU7 674 aaPredicted RBP25.21■■□□□ 1.63
HDAC11-203ENST00000402271 PPEF1O14829 653 aaPredicted RBP25.2■■□□□ 1.62
HDAC11-203ENST00000402271 DUSP27Q5VZP5 1158 aa25.19■■□□□ 1.62
HDAC11-203ENST00000402271 IFT57Q9NWB7 429 aa25.19■■□□□ 1.62
HDAC11-203ENST00000402271 LAMB2P55268 1798 aa25.18■■□□□ 1.62
HDAC11-203ENST00000402271 CALD1Q05682 793 aaKnown RBP25.18■■□□□ 1.62
HDAC11-203ENST00000402271 CHADLQ6NUI6 762 aa25.18■■□□□ 1.62
HDAC11-203ENST00000402271 JMYQ8N9B5 988 aa25.18■■□□□ 1.62
HDAC11-203ENST00000402271 PLBD2Q8NHP8 589 aa25.18■■□□□ 1.62
HDAC11-203ENST00000402271 JDP2Q8WYK2 163 aa25.17■■□□□ 1.62
HDAC11-203ENST00000402271 TAF1DQ9H5J8 278 aaPredicted RBP25.17■■□□□ 1.62
HDAC11-203ENST00000402271 COL4A5P29400 1685 aa25.17■■□□□ 1.62
HDAC11-203ENST00000402271 ABCC4O15439 1325 aa25.16■■□□□ 1.62
HDAC11-203ENST00000402271 SH3TC1Q8TE82 1336 aa25.16■■□□□ 1.62
HDAC11-203ENST00000402271 POTEIP0CG38 1075 aa25.16■■□□□ 1.62
HDAC11-203ENST00000402271 POTEJP0CG39 1038 aa25.16■■□□□ 1.62
HDAC11-203ENST00000402271 GNAI1P63096 354 aa25.16■■□□□ 1.62
HDAC11-203ENST00000402271 ANKRD13DQ6ZTN6 518 aa25.16■■□□□ 1.62
HDAC11-203ENST00000402271 HYPKQ9NX55 129 aa25.16■■□□□ 1.62
HDAC11-203ENST00000402271 TRMT112Q9UI30 125 aaKnown RBP25.16■■□□□ 1.62
HDAC11-203ENST00000402271 ATP6V0A2Q9Y487 856 aa25.16■■□□□ 1.62
HDAC11-203ENST00000402271 SLC51AQ86UW1 340 aa25.15■■□□□ 1.62
HDAC11-203ENST00000402271 HCLS1P14317 486 aaPredicted RBP25.14■■□□□ 1.62
HDAC11-203ENST00000402271 LDHDQ86WU2 507 aa25.14■■□□□ 1.62
HDAC11-203ENST00000402271 GPC2Q8N158 579 aa25.14■■□□□ 1.62
HDAC11-203ENST00000402271 ISCA1Q9BUE6 129 aa25.14■■□□□ 1.62
HDAC11-203ENST00000402271 HACL1Q9UJ83 578 aa25.14■■□□□ 1.62
HDAC11-203ENST00000402271 TCERG1O14776 1098 aaKnown RBP25.13■■□□□ 1.61
HDAC11-203ENST00000402271 BBOX1O75936 387 aa25.13■■□□□ 1.61
HDAC11-203ENST00000402271 ZEB1P37275 1124 aaPredicted RBP25.12■■□□□ 1.61
HDAC11-203ENST00000402271 TMX4Q9H1E5 349 aaPredicted RBP25.12■■□□□ 1.61
HDAC11-203ENST00000402271 ADAMTSL1Q8N6G6 1762 aa25.11■■□□□ 1.61
HDAC11-203ENST00000402271 EIF6P56537 245 aaKnown RBP25.11■■□□□ 1.61
HDAC11-203ENST00000402271 LARGE2Q8N3Y3 721 aa25.11■■□□□ 1.61
HDAC11-203ENST00000402271 VPS33BQ9H267 617 aa25.11■■□□□ 1.61
HDAC11-203ENST00000402271 DDX60Q8IY21 1712 aaKnown RBP25.11■■□□□ 1.61
HDAC11-203ENST00000402271 EPHX2P34913 555 aa25.1■■□□□ 1.61
HDAC11-203ENST00000402271 TRIM28Q13263 835 aaKnown RBP25.1■■□□□ 1.61
HDAC11-203ENST00000402271 CCDC184Q52MB2 194 aa25.1■■□□□ 1.61
HDAC11-203ENST00000402271 DDX46Q7L014 1031 aaKnown RBP25.1■■□□□ 1.61
HDAC11-203ENST00000402271 SP8Q8IXZ3 490 aa25.1■■□□□ 1.61
HDAC11-203ENST00000402271 RTFDC1Q9BY42 306 aaPredicted RBP25.1■■□□□ 1.61
HDAC11-203ENST00000402271 ATP5J2-PTCD1G3V325 749 aa25.08■■□□□ 1.61
HDAC11-203ENST00000402271 GRAPQ13588 217 aa25.08■■□□□ 1.61
HDAC11-203ENST00000402271 IFFO2Q5TF58 517 aa25.08■■□□□ 1.61
HDAC11-203ENST00000402271 PNMA8AQ86V59 439 aaPredicted RBP25.08■■□□□ 1.61
HDAC11-203ENST00000402271 SUPT20HQ8NEM7 779 aa25.08■■□□□ 1.61
HDAC11-203ENST00000402271 GRAPLQ8TC17 118 aaPredicted RBP25.08■■□□□ 1.61
HDAC11-203ENST00000402271 PASKQ96RG2 1323 aa25.08■■□□□ 1.6
HDAC11-203ENST00000402271 PPIP5K2O43314 1243 aa25.07■■□□□ 1.6
HDAC11-203ENST00000402271 EAPPQ56P03 285 aaPredicted RBP25.07■■□□□ 1.6
HDAC11-203ENST00000402271 NIM1KQ8IY84 436 aa25.07■■□□□ 1.6
HDAC11-203ENST00000402271 C8orf58Q8NAV2 365 aa25.07■■□□□ 1.6
HDAC11-203ENST00000402271 CREBZFQ9NS37 354 aa25.07■■□□□ 1.6
HDAC11-203ENST00000402271 ELL2O00472 640 aaPredicted RBP25.06■■□□□ 1.6
HDAC11-203ENST00000402271 SF3B3Q15393 1217 aaKnown RBP25.06■■□□□ 1.6
HDAC11-203ENST00000402271 TMC4Q7Z404 712 aa25.06■■□□□ 1.6
HDAC11-203ENST00000402271 FAM89AQ96GI7 184 aa25.06■■□□□ 1.6
HDAC11-203ENST00000402271 ITGBL1O95965 494 aaPredicted RBP25.05■■□□□ 1.6
HDAC11-203ENST00000402271 GOLGA2Q08379 1002 aa25.05■■□□□ 1.6
HDAC11-203ENST00000402271 AOC3Q16853 763 aa25.05■■□□□ 1.6
HDAC11-203ENST00000402271 CCDC27Q2M243 656 aa25.05■■□□□ 1.6
HDAC11-203ENST00000402271 DPP8Q6V1X1 898 aaPredicted RBP25.05■■□□□ 1.6
HDAC11-203ENST00000402271 RIC3Q7Z5B4 369 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms