RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 EFCAB6Q5THR3 1501 aa11.77□□□□□ -0.53
PTCHD4-202ENST00000398738 TNNT1P13805 278 aa11.77□□□□□ -0.53
PTCHD4-202ENST00000398738 TPD52L1Q16890 204 aaPredicted RBP11.77□□□□□ -0.53
PTCHD4-202ENST00000398738 JAKMIP1Q96N16 626 aaKnown RBP11.77□□□□□ -0.53
PTCHD4-202ENST00000398738 GTPBP4Q9BZE4 634 aaKnown RBP11.77□□□□□ -0.53
PTCHD4-202ENST00000398738 SPTLC3Q9NUV7 552 aa11.77□□□□□ -0.53
PTCHD4-202ENST00000398738 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.53
PTCHD4-202ENST00000398738 FOSBP53539 338 aa11.77□□□□□ -0.53
PTCHD4-202ENST00000398738 STK3Q13188 491 aa11.77□□□□□ -0.53
PTCHD4-202ENST00000398738 PRPF40BQ6NWY9 871 aaKnown RBP11.77□□□□□ -0.53
PTCHD4-202ENST00000398738 LIMCH1Q9UPQ0 1083 aa11.77□□□□□ -0.53
PTCHD4-202ENST00000398738 ERICH4A6NGS2 130 aa11.76□□□□□ -0.53
PTCHD4-202ENST00000398738 VGLL3A8MV65 326 aa11.76□□□□□ -0.53
PTCHD4-202ENST00000398738 LIG1P18858 919 aa11.76□□□□□ -0.53
PTCHD4-202ENST00000398738 CCT4P50991 539 aaKnown RBP11.76□□□□□ -0.53
PTCHD4-202ENST00000398738 ANAPC15P60006 121 aa11.76□□□□□ -0.53
PTCHD4-202ENST00000398738 CEBPZQ03701 1054 aaKnown RBP11.76□□□□□ -0.53
PTCHD4-202ENST00000398738 HOMEZQ8IX15 550 aa11.76□□□□□ -0.53
PTCHD4-202ENST00000398738 OSBPL3Q9H4L5 887 aa11.76□□□□□ -0.53
PTCHD4-202ENST00000398738 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.76□□□□□ -0.53
PTCHD4-202ENST00000398738 RPAP1Q9BWH6 1393 aaPredicted RBP11.76□□□□□ -0.53
PTCHD4-202ENST00000398738 LETM1O95202 739 aaPredicted RBP11.76□□□□□ -0.53
PTCHD4-202ENST00000398738 GTF2F1P35269 517 aaKnown RBP eCLIP11.76□□□□□ -0.536e-16■■■■■ 57.3
PTCHD4-202ENST00000398738 TRERF1Q96PN7 1200 aa11.76□□□□□ -0.53
PTCHD4-202ENST00000398738 PTPRCP08575 1304 aa11.76□□□□□ -0.53
PTCHD4-202ENST00000398738 ADGRB3O60242 1522 aa11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 EIF2S2P20042 333 aaKnown RBP11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 TRMT1Q9NXH9 659 aaKnown RBP11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 ATP6V1DQ9Y5K8 247 aa11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 CD163L1Q9NR16 1453 aa11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 A0A087WWV3 80 aa11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 HSPA4P34932 840 aa11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 NCBP1Q09161 790 aaKnown RBP11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 FLIIQ13045 1269 aa11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 ADCK5Q3MIX3 580 aa11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 ANO6Q4KMQ2 910 aa11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 SYTL4Q96C24 671 aaPredicted RBP11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 PCDHGA10Q9Y5H3 936 aa11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 G3V3G9 751 aa11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 PPFIA3O75145 1194 aa11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 UBTFL1P0CB47 393 aaPredicted RBP11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 MLECQ14165 292 aa11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 LARP1BQ659C4 914 aaKnown RBP11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 DACT1Q9NYF0 836 aa11.75□□□□□ -0.53
PTCHD4-202ENST00000398738 KNDC1Q76NI1 1749 aa11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 SETBP1Q9Y6X0 1596 aa11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 PROCA1Q8NCQ7 364 aaPredicted RBP11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 NUP62CLQ9H1M0 184 aa11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 TNMDQ9H2S6 317 aa11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 PDRG1Q9NUG6 133 aa11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 POLR3EQ9NVU0 708 aa11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 TYRO3Q06418 890 aa11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 HIC1Q14526 733 aa11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 ARID5BQ14865 1188 aa11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 MAP3K11Q16584 847 aa11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 CCDC112Q8NEF3 446 aa11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 NUDT16Q96DE0 195 aaKnown RBP11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 POM121Q96HA1 1249 aa11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 MYO3AQ8NEV4 1616 aa11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 RGS12O14924 1447 aa11.74□□□□□ -0.53
PTCHD4-202ENST00000398738 SRGAP3O43295 1099 aa11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 ATP8B2P98198 1209 aa11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 FILIP1Q7Z7B0 1213 aa11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 LTV1Q96GA3 475 aaPredicted RBP11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 MTMR6Q9Y217 621 aa11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 KIF20AO95235 890 aa11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 GNAI3P08754 354 aa11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 COL9A3Q14050 684 aaPredicted RBP11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 PPP1R42Q7Z4L9 355 aa11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 TTC6Q86TZ1 520 aa11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 BICD2Q8TD16 824 aa11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 DNAJC25Q9H1X3 360 aa11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 CAMSAP1Q5T5Y3 1602 aa11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 ZFYVE9O95405 1425 aa11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 PTH1RQ03431 593 aa11.73□□□□□ -0.53
PTCHD4-202ENST00000398738 VWDEQ8N2E2 1590 aa11.72□□□□□ -0.53
PTCHD4-202ENST00000398738 FER1L4A9Z1Z3 1794 aa11.72□□□□□ -0.53
PTCHD4-202ENST00000398738 C3orf80F5H4A9 247 aa11.72□□□□□ -0.53
PTCHD4-202ENST00000398738 ANXA1P04083 346 aa11.72□□□□□ -0.53
PTCHD4-202ENST00000398738 MTHFSDQ2M296 383 aaKnown RBP11.72□□□□□ -0.53
PTCHD4-202ENST00000398738 FAM200AQ8TCP9 573 aa11.72□□□□□ -0.53
PTCHD4-202ENST00000398738 CBX8Q9HC52 389 aa11.72□□□□□ -0.53
PTCHD4-202ENST00000398738 ABCC3O15438 1527 aa11.72□□□□□ -0.53
PTCHD4-202ENST00000398738 SGSM2O43147 1006 aa11.72□□□□□ -0.53
PTCHD4-202ENST00000398738 CDC37L1Q7L3B6 337 aa11.72□□□□□ -0.53
PTCHD4-202ENST00000398738 DDX11Q96FC9 970 aa11.72□□□□□ -0.53
PTCHD4-202ENST00000398738 TCHHQ07283 1943 aa11.72□□□□□ -0.53
PTCHD4-202ENST00000398738 DEPDC5O75140 1603 aa11.72□□□□□ -0.53
PTCHD4-202ENST00000398738 MROH1Q8NDA8 1641 aa11.72□□□□□ -0.53
PTCHD4-202ENST00000398738 AMHR2Q16671 573 aa11.71□□□□□ -0.53
PTCHD4-202ENST00000398738 FUCA2Q9BTY2 467 aa11.71□□□□□ -0.53
PTCHD4-202ENST00000398738 PHAXQ9H814 394 aaKnown RBP11.71□□□□□ -0.53
PTCHD4-202ENST00000398738 CLIP2Q9UDT6 1046 aa11.71□□□□□ -0.53
PTCHD4-202ENST00000398738 MRVI1Q9Y6F6 885 aa11.71□□□□□ -0.53
PTCHD4-202ENST00000398738 METRNQ9UJH8 293 aa11.71□□□□□ -0.53
PTCHD4-202ENST00000398738 KIF24Q5T7B8 1368 aa11.71□□□□□ -0.54
PTCHD4-202ENST00000398738 KRT85P78386 507 aa11.71□□□□□ -0.54
PTCHD4-202ENST00000398738 ME3Q16798 604 aa11.71□□□□□ -0.54
PTCHD4-202ENST00000398738 RHPN1Q8TCX5 695 aa11.71□□□□□ -0.54
PTCHD4-202ENST00000398738 ANKRD7Q92527 254 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms