RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 CNNM2Q9H8M5 875 aa3.16□□□□□ -1.9
CHD9-202ENST00000398510 GOLGA6AQ9NYA3 693 aa3.16□□□□□ -1.9
CHD9-202ENST00000398510 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.16□□□□□ -1.9
CHD9-202ENST00000398510 RTL1A6NKG5 1358 aa3.16□□□□□ -1.9
CHD9-202ENST00000398510 KIF24Q5T7B8 1368 aa3.16□□□□□ -1.9
CHD9-202ENST00000398510 GOLGA6L9A6NEM1 432 aa3.16□□□□□ -1.9
CHD9-202ENST00000398510 KIF22Q14807 665 aa3.16□□□□□ -1.9
CHD9-202ENST00000398510 NUP133Q8WUM0 1156 aa3.16□□□□□ -1.9
CHD9-202ENST00000398510 EYA3Q99504 573 aa3.16□□□□□ -1.9
CHD9-202ENST00000398510 ANO2Q9NQ90 1003 aa3.16□□□□□ -1.9
CHD9-202ENST00000398510 ADGRB3O60242 1522 aa3.16□□□□□ -1.9
CHD9-202ENST00000398510 IGF1RP08069 1367 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 GNAT3A8MTJ3 354 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 FCHSD2O94868 740 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 PPP1R2P41236 205 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 PABPC4Q13310 644 aaKnown RBP eCLIP3.15□□□□□ -1.9
CHD9-202ENST00000398510 CUL4BQ13620 913 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 USP25Q9UHP3 1055 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 NFKBIAP25963 317 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 HMGN5P82970 282 aaKnown RBP3.15□□□□□ -1.9
CHD9-202ENST00000398510 IQCDQ96DY2 449 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 CFAP57Q96MR6 1250 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 VWDEQ8N2E2 1590 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 MRPS9P82933 396 aaKnown RBP3.15□□□□□ -1.9
CHD9-202ENST00000398510 KRT23Q9C075 422 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 MIS12Q9H081 205 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 CGNQ9P2M7 1197 aaKnown RBP3.15□□□□□ -1.9
CHD9-202ENST00000398510 TSPYL4Q9UJ04 414 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 TRAK1Q9UPV9 953 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 F8W8V4 182 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 GNAI2P04899 355 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 TTLL12Q14166 644 aaPredicted RBP3.15□□□□□ -1.9
CHD9-202ENST00000398510 ZNF569Q5MCW4 686 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 CCDC174Q6PII3 467 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 CRACR2BQ8N4Y2 399 aaPredicted RBP3.15□□□□□ -1.9
CHD9-202ENST00000398510 PPFIBP2Q8ND30 876 aa3.15□□□□□ -1.9
CHD9-202ENST00000398510 PLCH2O75038 1416 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 NPATQ14207 1427 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 FAM135BQ49AJ0 1406 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 PHLPP2Q6ZVD8 1323 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 A2ML1A8K2U0 1454 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 CHD2O14647 1828 aaKnown RBP3.15□□□□□ -1.91
CHD9-202ENST00000398510 ACTN2P35609 894 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 MATR3P43243 847 aaKnown RBP eCLIP3.15□□□□□ -1.911e-6■■■□□ 17.1
CHD9-202ENST00000398510 MAP7Q14244 749 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 NR1I2O75469 434 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 GLRX3O76003 335 aaKnown RBP3.15□□□□□ -1.91
CHD9-202ENST00000398510 SMC3Q9UQE7 1217 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 CLTCL1P53675 1640 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 PTCH1Q13635 1447 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 CCDC27Q2M243 656 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 TEKT1Q969V4 418 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 CCDC97Q96F63 343 aaPredicted RBP3.15□□□□□ -1.91
CHD9-202ENST00000398510 CACYBPQ9HB71 228 aaKnown RBP3.15□□□□□ -1.91
CHD9-202ENST00000398510 CCDC39Q9UFE4 941 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 PRDM15P57071 1507 aaPredicted RBP3.15□□□□□ -1.91
CHD9-202ENST00000398510 MYO5BQ9ULV0 1848 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 ATP2A2P16615 1042 aaKnown RBP3.15□□□□□ -1.91
CHD9-202ENST00000398510 ZNF713Q8N859 430 aaPredicted RBP3.15□□□□□ -1.91
CHD9-202ENST00000398510 AIDAQ96BJ3 306 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 SPC25Q9HBM1 224 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 CYP46A1Q9Y6A2 500 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 BTBD11A6QL63 1104 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 CDC45O75419 566 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 CCDC175P0C221 793 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 ALS2CR12Q96Q35 445 aa3.15□□□□□ -1.91
CHD9-202ENST00000398510 RGS12O14924 1447 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 TYW5A2RUC4 315 aaKnown RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 NLRP6P59044 892 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 TCIRG1Q13488 830 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 GBP3Q9H0R5 595 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 CABP5Q9NP86 173 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 BIN2Q9UBW5 565 aaPredicted RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 SWAP70Q9UH65 585 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 PLEKHG2Q9H7P9 1386 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 ATP10BO94823 1461 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 ATP7BP35670 1465 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 POTEB2H3BUK9 544 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 CCDC83Q8IWF9 413 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 IFT57Q9NWB7 429 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 RMND1Q9NWS8 449 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 MVPQ14764 893 aaKnown RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 ENOX2Q16206 610 aaKnown RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 ALDH1L2Q3SY69 923 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 CCDC181Q5TID7 509 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 CEP135Q66GS9 1140 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 ZFP91Q96JP5 570 aaPredicted RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 HMG20BQ9P0W2 317 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 LMTK3Q96Q04 1460 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 FLT4P35916 1363 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 DUSP27Q5VZP5 1158 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 ZNF772Q68DY9 489 aaPredicted RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 MAP3K5Q99683 1374 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 CCDC66A2RUB6 948 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 PALM3A6NDB9 673 aaPredicted RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 TDO2P48775 406 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 LRRC59Q96AG4 307 aaKnown RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 PUS7Q96PZ0 661 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms