RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 CCDC73Q6ZRK6 1079 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 NFATC2IPQ8NCF5 419 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 ANKRD13DQ6ZTN6 518 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 SASH1O94885 1247 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 HAND2P61296 217 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 FKBP4Q02790 459 aaKnown RBP eCLIP5.83□□□□□ -1.48
SMAD4-202ENST00000398417 TTC41PQ6P2S7 1318 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 Q6ZUG5 572 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 FMNL2Q96PY5 1086 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 U3KPZ7 1027 aaPredicted RBP5.83□□□□□ -1.48
SMAD4-202ENST00000398417 GRM8O00222 908 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 CCDC192P0DO97 292 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 DDX21Q9NR30 783 aaKnown RBP eCLIP5.83□□□□□ -1.48
SMAD4-202ENST00000398417 TPCN1Q9ULQ1 816 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 RNF17Q9BXT8 1623 aaKnown RBP5.83□□□□□ -1.48
SMAD4-202ENST00000398417 PTPRUQ92729 1446 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 TSC1Q92574 1164 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 BABAM1Q9NWV8 329 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 DACT1Q9NYF0 836 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 CCDC171Q6TFL3 1326 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 APOBRQ0VD83 1088 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 ME3Q16798 604 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 CHST3Q7LGC8 479 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 PAF1Q8N7H5 531 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 MTMR6Q9Y217 621 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 USP16Q9Y5T5 823 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 AOX1Q06278 1338 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 RAD50Q92878 1312 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 A0A0D9SFI3 127 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 GOLGA6L19H0YKK7 550 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 GIGYF1O75420 1035 aaPredicted RBP5.83□□□□□ -1.48
SMAD4-202ENST00000398417 TPD52L1Q16890 204 aaPredicted RBP5.83□□□□□ -1.48
SMAD4-202ENST00000398417 SLFNL1Q499Z3 407 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 PRDM10Q9NQV6 1147 aa5.83□□□□□ -1.48
SMAD4-202ENST00000398417 MAP3K11Q16584 847 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 CCDC186Q7Z3E2 898 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 LAMC1P11047 1609 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 CPLX1O14810 134 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 CCDC158Q5M9N0 1113 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 UBE3BQ7Z3V4 1068 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 PSMD1Q99460 953 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 FBXO3Q9UK99 471 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 NOL7Q9UMY1 257 aaKnown RBP5.82□□□□□ -1.48
SMAD4-202ENST00000398417 NOLC1Q14978 699 aaKnown RBP eCLIP5.82□□□□□ -1.48
SMAD4-202ENST00000398417 SYTL4Q96C24 671 aaPredicted RBP5.82□□□□□ -1.48
SMAD4-202ENST00000398417 DNAJC25Q9H1X3 360 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 SNRPA1P09661 255 aaKnown RBP5.82□□□□□ -1.48
SMAD4-202ENST00000398417 STK38Q15208 465 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 ANKRD1Q15327 319 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 JAK2O60674 1132 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 UBE2HP62256 183 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 TNNI3KQ59H18 835 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 NFXL1Q6ZNB6 911 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 CDC37L1Q7L3B6 337 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 ZNF594Q96JF6 807 aaPredicted RBP5.82□□□□□ -1.48
SMAD4-202ENST00000398417 FPGT-TNNI3KV9GXZ4 949 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 ALKQ9UM73 1620 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 ATP10DQ9P241 1426 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 PDE4CQ08493 712 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 EPHA10Q5JZY3 1008 aa5.82□□□□□ -1.48
SMAD4-202ENST00000398417 ZNF496Q96IT1 587 aaPredicted RBP5.82□□□□□ -1.48
SMAD4-202ENST00000398417 CHGBP05060 677 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 VPS53Q5VIR6 699 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 LUZP1Q86V48 1076 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 CCAR1Q8IX12 1150 aaKnown RBP5.81□□□□□ -1.48
SMAD4-202ENST00000398417 CDK12Q9NYV4 1490 aaPredicted RBP5.81□□□□□ -1.48
SMAD4-202ENST00000398417 ATP2B1P20020 1258 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 TIMM10P62072 90 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 TPM3P06753 285 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 RPS6KB1P23443 525 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 CEP126Q9P2H0 1117 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 AXIN2Q9Y2T1 843 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 A1BGP04217 495 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 NCOA3Q9Y6Q9 1424 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 INO80Q9ULG1 1556 aaPredicted RBP5.81□□□□□ -1.48
SMAD4-202ENST00000398417 LIG1P18858 919 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 GPTP24298 496 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 GCKRQ14397 625 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.81□□□□□ -1.48
SMAD4-202ENST00000398417 USP31Q70CQ4 1352 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 FILIP1Q7Z7B0 1213 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 TAF6LQ9Y6J9 622 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 GON4LQ3T8J9 2241 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 HOXB7P09629 217 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 PTGS1P23219 599 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 TTC6Q86TZ1 520 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 ZNF589Q86UQ0 364 aaPredicted RBP5.81□□□□□ -1.48
SMAD4-202ENST00000398417 ZSWIM6Q9HCJ5 1215 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 SALL3Q9BXA9 1300 aa5.81□□□□□ -1.48
SMAD4-202ENST00000398417 TTLL5Q6EMB2 1281 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 ARHGEF25Q86VW2 580 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 NEXMIFQ5QGS0 1516 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 KRT32Q14532 448 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 ANO6Q4KMQ2 910 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 ZNF396Q96N95 335 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-202ENST00000398417 CNNM1Q9NRU3 951 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 PYCARDQ9ULZ3 195 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 LRRC7Q96NW7 1537 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 ADAMTS13Q76LX8 1427 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 RRP9O43818 475 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms