RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 TRMT2AQ8IZ69 625 aaKnown RBP32.73■■■□□ 2.83
U2AF1-203ENST00000398137 ZC3H4Q9UPT8 1303 aaKnown RBP32.73■■■□□ 2.83
U2AF1-203ENST00000398137 NUTM1Q86Y26 1132 aa32.72■■■□□ 2.83
U2AF1-203ENST00000398137 ZNF34Q8IZ26 560 aa32.72■■■□□ 2.83
U2AF1-203ENST00000398137 GPTP24298 496 aa32.71■■■□□ 2.83
U2AF1-203ENST00000398137 GIGYF2Q6Y7W6 1299 aaKnown RBP32.71■■■□□ 2.83
U2AF1-203ENST00000398137 TOMM70O94826 608 aa32.7■■■□□ 2.83
U2AF1-203ENST00000398137 NPR1P16066 1061 aa32.7■■■□□ 2.83
U2AF1-203ENST00000398137 HSPA6P17066 643 aa32.7■■■□□ 2.83
U2AF1-203ENST00000398137 SUSD4Q5VX71 490 aa32.7■■■□□ 2.83
U2AF1-203ENST00000398137 CHPF2Q9P2E5 772 aa32.7■■■□□ 2.83
U2AF1-203ENST00000398137 ERFEQ4G0M1 354 aa32.69■■■□□ 2.82
U2AF1-203ENST00000398137 KDM2BQ8NHM5 1336 aa32.69■■■□□ 2.82
U2AF1-203ENST00000398137 LTBP3Q9NS15 1303 aa32.69■■■□□ 2.82
U2AF1-203ENST00000398137 IBTKQ9P2D0 1353 aaPredicted RBP32.69■■■□□ 2.82
U2AF1-203ENST00000398137 RRAGCQ9HB90 399 aa32.68■■■□□ 2.82
U2AF1-203ENST00000398137 CRY2Q49AN0 593 aa32.67■■■□□ 2.82
U2AF1-203ENST00000398137 ANKRD36CQ5JPF3 1778 aa32.66■■■□□ 2.82
U2AF1-203ENST00000398137 VAMP4O75379 141 aa32.66■■■□□ 2.82
U2AF1-203ENST00000398137 OLFM4Q6UX06 510 aa32.66■■■□□ 2.82
U2AF1-203ENST00000398137 NYXQ9GZU5 481 aa32.66■■■□□ 2.82
U2AF1-203ENST00000398137 RIC1Q4ADV7 1423 aa32.66■■■□□ 2.82
U2AF1-203ENST00000398137 GLTPD2A6NH11 291 aa32.65■■■□□ 2.82
U2AF1-203ENST00000398137 TCERG1O14776 1098 aaKnown RBP32.65■■■□□ 2.82
U2AF1-203ENST00000398137 NTSR2O95665 410 aa32.65■■■□□ 2.82
U2AF1-203ENST00000398137 CCDC30Q5VVM6 783 aa32.65■■■□□ 2.82
U2AF1-203ENST00000398137 TAOK3Q9H2K8 898 aa32.65■■■□□ 2.82
U2AF1-203ENST00000398137 DDX21Q9NR30 783 aaKnown RBP eCLIP32.65■■■□□ 2.82
U2AF1-203ENST00000398137 DBF4Q9UBU7 674 aaPredicted RBP32.64■■■□□ 2.82
U2AF1-203ENST00000398137 SNED1Q8TER0 1413 aa32.63■■■□□ 2.81
U2AF1-203ENST00000398137 GTF2E1P29083 439 aaPredicted RBP32.63■■■□□ 2.81
U2AF1-203ENST00000398137 COPS6Q7L5N1 327 aa32.63■■■□□ 2.81
U2AF1-203ENST00000398137 C3orf67Q6ZVT6 689 aa32.62■■■□□ 2.81
U2AF1-203ENST00000398137 XAGE3Q8WTP9 111 aa32.62■■■□□ 2.81
U2AF1-203ENST00000398137 CHMP4AQ9BY43 222 aa32.62■■■□□ 2.81
U2AF1-203ENST00000398137 SOGA3Q5TF21 947 aa32.61■■■□□ 2.81
U2AF1-203ENST00000398137 RBM46Q8TBY0 533 aaKnown RBP32.61■■■□□ 2.81
U2AF1-203ENST00000398137 STK31Q9BXU1 1019 aa32.6■■■□□ 2.81
U2AF1-203ENST00000398137 WDR90Q96KV7 1748 aa32.6■■■□□ 2.81
U2AF1-203ENST00000398137 POTECB2RU33 542 aa32.59■■■□□ 2.81
U2AF1-203ENST00000398137 AIMP1Q12904 312 aaKnown RBP32.59■■■□□ 2.81
U2AF1-203ENST00000398137 CCDC93Q567U6 631 aa32.58■■■□□ 2.81
U2AF1-203ENST00000398137 HOXA10P31260 410 aaPredicted RBP32.57■■■□□ 2.8
U2AF1-203ENST00000398137 PARP10Q53GL7 1025 aa32.57■■■□□ 2.8
U2AF1-203ENST00000398137 SLC51AQ86UW1 340 aa32.57■■■□□ 2.8
U2AF1-203ENST00000398137 HYPKQ9NX55 129 aa32.57■■■□□ 2.8
U2AF1-203ENST00000398137 ALDH1B1P30837 517 aa32.56■■■□□ 2.8
U2AF1-203ENST00000398137 LAMB2P55268 1798 aa32.55■■■□□ 2.8
U2AF1-203ENST00000398137 PPP1R42Q7Z4L9 355 aa32.54■■■□□ 2.8
U2AF1-203ENST00000398137 PHAXQ9H814 394 aaKnown RBP32.54■■■□□ 2.8
U2AF1-203ENST00000398137 FKBP4Q02790 459 aaKnown RBP eCLIP32.53■■■□□ 2.8
U2AF1-203ENST00000398137 SLC10A5Q5PT55 438 aa32.53■■■□□ 2.8
U2AF1-203ENST00000398137 NLRP10Q86W26 655 aa32.53■■■□□ 2.8
U2AF1-203ENST00000398137 C16orf71Q8IYS4 520 aaPredicted RBP32.53■■■□□ 2.8
U2AF1-203ENST00000398137 SLC4A2P04920 1241 aa32.52■■■□□ 2.8
U2AF1-203ENST00000398137 CT47B1P0C2W7 299 aaPredicted RBP32.52■■■□□ 2.8
U2AF1-203ENST00000398137 VEGFAP15692 232 aaPredicted RBP32.52■■■□□ 2.8
U2AF1-203ENST00000398137 TCIRG1Q13488 830 aa32.52■■■□□ 2.8
U2AF1-203ENST00000398137 SYNE4Q8N205 404 aa32.52■■■□□ 2.8
U2AF1-203ENST00000398137 UTP14AQ9BVJ6 771 aaKnown RBP32.52■■■□□ 2.8
U2AF1-203ENST00000398137 ZNF277Q9NRM2 450 aaPredicted RBP32.51■■■□□ 2.79
U2AF1-203ENST00000398137 FSTL1Q12841 308 aa32.49■■■□□ 2.79
U2AF1-203ENST00000398137 G2E3Q7L622 706 aa32.49■■■□□ 2.79
U2AF1-203ENST00000398137 RTKN2Q8IZC4 609 aa32.49■■■□□ 2.79
U2AF1-203ENST00000398137 RPGRQ92834 1020 aaKnown RBP32.49■■■□□ 2.79
U2AF1-203ENST00000398137 CRAMP1Q96RY5 1269 aa32.49■■■□□ 2.79
U2AF1-203ENST00000398137 COL4A5P29400 1685 aa32.48■■■□□ 2.79
U2AF1-203ENST00000398137 DDNO94850 711 aaPredicted RBP32.48■■■□□ 2.79
U2AF1-203ENST00000398137 HSP90AB3PQ58FF7 597 aa32.48■■■□□ 2.79
U2AF1-203ENST00000398137 DPY19L2Q6NUT2 758 aa32.48■■■□□ 2.79
U2AF1-203ENST00000398137 ZNF428Q96B54 188 aa32.48■■■□□ 2.79
U2AF1-203ENST00000398137 BCL2L13Q9BXK5 485 aa32.48■■■□□ 2.79
U2AF1-203ENST00000398137 APLP1P51693 650 aa32.47■■■□□ 2.79
U2AF1-203ENST00000398137 PLBD2Q8NHP8 589 aa32.47■■■□□ 2.79
U2AF1-203ENST00000398137 SSH1Q8WYL5 1049 aa32.47■■■□□ 2.79
U2AF1-203ENST00000398137 RNF123Q5XPI4 1314 aa32.46■■■□□ 2.79
U2AF1-203ENST00000398137 DDX60Q8IY21 1712 aaKnown RBP32.46■■■□□ 2.79
U2AF1-203ENST00000398137 ANKRD13DQ6ZTN6 518 aa32.45■■■□□ 2.79
U2AF1-203ENST00000398137 RBM17Q96I25 401 aaKnown RBP32.45■■■□□ 2.79
U2AF1-203ENST00000398137 NLRP3Q96P20 1036 aa32.45■■■□□ 2.79
U2AF1-203ENST00000398137 SMC4Q9NTJ3 1288 aa32.45■■■□□ 2.79
U2AF1-203ENST00000398137 CACNA1FO60840 1977 aa32.45■■■□□ 2.78
U2AF1-203ENST00000398137 HCLS1P14317 486 aaPredicted RBP32.44■■■□□ 2.78
U2AF1-203ENST00000398137 FLIIQ13045 1269 aa32.44■■■□□ 2.78
U2AF1-203ENST00000398137 ALDH1L2Q3SY69 923 aa32.44■■■□□ 2.78
U2AF1-203ENST00000398137 DNAJC5GQ8N7S2 189 aa32.44■■■□□ 2.78
U2AF1-203ENST00000398137 PSMD1Q99460 953 aa32.44■■■□□ 2.78
U2AF1-203ENST00000398137 ISCA1Q9BUE6 129 aa32.44■■■□□ 2.78
U2AF1-203ENST00000398137 ZNF541Q9H0D2 1346 aa32.44■■■□□ 2.78
U2AF1-203ENST00000398137 IARSP41252 1262 aaKnown RBP32.43■■■□□ 2.78
U2AF1-203ENST00000398137 RARSP54136 660 aaKnown RBP32.43■■■□□ 2.78
U2AF1-203ENST00000398137 MRPL50Q8N5N7 158 aaKnown RBP32.43■■■□□ 2.78
U2AF1-203ENST00000398137 SMC1BQ8NDV3 1235 aa32.43■■■□□ 2.78
U2AF1-203ENST00000398137 TAF1P21675 1872 aa32.43■■■□□ 2.78
U2AF1-203ENST00000398137 HTRA3P83110 453 aa32.42■■■□□ 2.78
U2AF1-203ENST00000398137 TRMT112Q9UI30 125 aaKnown RBP32.42■■■□□ 2.78
U2AF1-203ENST00000398137 PPEF1O14829 653 aaPredicted RBP32.41■■■□□ 2.78
U2AF1-203ENST00000398137 CC2D2BQ6DHV5 1058 aa32.41■■■□□ 2.78
U2AF1-203ENST00000398137 ABCC4O15439 1325 aa32.41■■■□□ 2.78
U2AF1-203ENST00000398137 DDX58O95786 925 aaKnown RBP32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms