RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, humanhuman

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-205ENST00000397370 BRPF1P55201 1214 aaPredicted RBP20.55■□□□□ 0.88
RBM39-205ENST00000397370 NEXNQ0ZGT2 675 aa20.55■□□□□ 0.88
RBM39-205ENST00000397370 ERFEQ4G0M1 354 aa20.55■□□□□ 0.88
RBM39-205ENST00000397370 PTPRCP08575 1304 aa20.54■□□□□ 0.88
RBM39-205ENST00000397370 BRCA1P38398 1863 aaKnown RBP20.54■□□□□ 0.88
RBM39-205ENST00000397370 IGKV5-2P06315 115 aa20.54■□□□□ 0.88
RBM39-205ENST00000397370 DPEP1P16444 411 aa20.54■□□□□ 0.88
RBM39-205ENST00000397370 PDE6BP35913 854 aa20.54■□□□□ 0.88
RBM39-205ENST00000397370 CCDC191Q8NCU4 936 aa20.54■□□□□ 0.88
RBM39-205ENST00000397370 TRMT112Q9UI30 125 aaKnown RBP20.54■□□□□ 0.88
RBM39-205ENST00000397370 ABCC12Q96J65 1359 aa20.54■□□□□ 0.88
RBM39-205ENST00000397370 DLEC1Q9Y238 1755 aa20.54■□□□□ 0.88
RBM39-205ENST00000397370 RNF123Q5XPI4 1314 aa20.53■□□□□ 0.88
RBM39-205ENST00000397370 CHRNA5P30532 468 aa20.53■□□□□ 0.88
RBM39-205ENST00000397370 CWC25Q9NXE8 425 aaPredicted RBP20.53■□□□□ 0.88
RBM39-205ENST00000397370 COL11A2P13942 1736 aaPredicted RBP20.53■□□□□ 0.88
RBM39-205ENST00000397370 TNRC6CQ9HCJ0 1690 aaKnown RBP20.52■□□□□ 0.88
RBM39-205ENST00000397370 KCNA3P22001 575 aa20.52■□□□□ 0.88
RBM39-205ENST00000397370 C2CD5Q86YS7 1000 aa20.52■□□□□ 0.88
RBM39-205ENST00000397370 PDZRN3Q9UPQ7 1066 aa20.52■□□□□ 0.88
RBM39-205ENST00000397370 RIC1Q4ADV7 1423 aa20.52■□□□□ 0.87
RBM39-205ENST00000397370 SH3TC1Q8TE82 1336 aa20.52■□□□□ 0.87
RBM39-205ENST00000397370 NEURL1BA8MQ27 555 aa20.51■□□□□ 0.87
RBM39-205ENST00000397370 H0YIN7 160 aa20.51■□□□□ 0.87
RBM39-205ENST00000397370 CWF19L2Q2TBE0 894 aaKnown RBP20.51■□□□□ 0.87
RBM39-205ENST00000397370 SLC10A5Q5PT55 438 aa20.51■□□□□ 0.87
RBM39-205ENST00000397370 SYNE4Q8N205 404 aa20.51■□□□□ 0.87
RBM39-205ENST00000397370 LINS1Q8NG48 757 aa20.51■□□□□ 0.87
RBM39-205ENST00000397370 NOB1Q9ULX3 412 aaKnown RBP20.51■□□□□ 0.87
RBM39-205ENST00000397370 BCAR3O75815 825 aa20.5■□□□□ 0.87
RBM39-205ENST00000397370 BEND3Q5T5X7 828 aa20.5■□□□□ 0.87
RBM39-205ENST00000397370 ZBTB38Q8NAP3 1195 aaPredicted RBP20.5■□□□□ 0.87
RBM39-205ENST00000397370 FAM89AQ96GI7 184 aa20.5■□□□□ 0.87
RBM39-205ENST00000397370 KIF16BQ96L93 1317 aa20.5■□□□□ 0.87
RBM39-205ENST00000397370 DDX60Q8IY21 1712 aaKnown RBP20.5■□□□□ 0.87
RBM39-205ENST00000397370 LAMB2P55268 1798 aa20.49■□□□□ 0.87
RBM39-205ENST00000397370 KLRG2A4D1S0 409 aaPredicted RBP20.49■□□□□ 0.87
RBM39-205ENST00000397370 SLC4A10Q6U841 1118 aa20.49■□□□□ 0.87
RBM39-205ENST00000397370 PCCAP05165 728 aaPredicted RBP20.48■□□□□ 0.87
RBM39-205ENST00000397370 RTL5Q5HYW3 569 aaPredicted RBP20.48■□□□□ 0.87
RBM39-205ENST00000397370 WWC3Q9ULE0 1092 aa20.48■□□□□ 0.87
RBM39-205ENST00000397370 SRGNP10124 158 aa20.47■□□□□ 0.87
RBM39-205ENST00000397370 HCLS1P14317 486 aaPredicted RBP20.47■□□□□ 0.87
RBM39-205ENST00000397370 GCKRQ14397 625 aa20.47■□□□□ 0.87
RBM39-205ENST00000397370 PIM2Q9P1W9 311 aa20.47■□□□□ 0.87
RBM39-205ENST00000397370 CACNA1SQ13698 1873 aa20.47■□□□□ 0.87
RBM39-205ENST00000397370 CRY2Q49AN0 593 aa20.46■□□□□ 0.87
RBM39-205ENST00000397370 C3orf67Q6ZVT6 689 aa20.46■□□□□ 0.87
RBM39-205ENST00000397370 PELP1Q8IZL8 1130 aaKnown RBP20.46■□□□□ 0.87
RBM39-205ENST00000397370 ARHGAP45Q92619 1136 aa20.46■□□□□ 0.87
RBM39-205ENST00000397370 JARID2Q92833 1246 aaPredicted RBP20.46■□□□□ 0.87
RBM39-205ENST00000397370 ZNF622Q969S3 477 aaKnown RBP eCLIP20.46■□□□□ 0.871e-56■□□□□ 8.6
RBM39-205ENST00000397370 MASTLQ96GX5 879 aa20.46■□□□□ 0.87
RBM39-205ENST00000397370 NLRP3Q96P20 1036 aa20.46■□□□□ 0.87
RBM39-205ENST00000397370 API5Q9BZZ5 524 aaKnown RBP20.46■□□□□ 0.87
RBM39-205ENST00000397370 IRS4O14654 1257 aaPredicted RBP20.45■□□□□ 0.86
RBM39-205ENST00000397370 ALDH1L1O75891 902 aa20.45■□□□□ 0.86
RBM39-205ENST00000397370 GPR162Q16538 588 aa20.45■□□□□ 0.86
RBM39-205ENST00000397370 STYK1Q6J9G0 422 aa20.45■□□□□ 0.86
RBM39-205ENST00000397370 SRCIN1Q9C0H9 1055 aa20.45■□□□□ 0.86
RBM39-205ENST00000397370 ARFGEF1Q9Y6D6 1849 aa20.45■□□□□ 0.86
RBM39-205ENST00000397370 H7C1W4 665 aa20.44■□□□□ 0.86
RBM39-205ENST00000397370 IPO8O15397 1037 aaKnown RBP20.44■□□□□ 0.86
RBM39-205ENST00000397370 NPR1P16066 1061 aa20.44■□□□□ 0.86
RBM39-205ENST00000397370 YBX3P16989 372 aaKnown RBP eCLIP20.44■□□□□ 0.86
RBM39-205ENST00000397370 FRAT1Q92837 279 aaPredicted RBP20.44■□□□□ 0.86
RBM39-205ENST00000397370 BCS1LQ9Y276 419 aa20.44■□□□□ 0.86
RBM39-205ENST00000397370 MYH3P11055 1940 aa20.44■□□□□ 0.86
RBM39-205ENST00000397370 CDHR2Q9BYE9 1310 aa20.44■□□□□ 0.86
RBM39-205ENST00000397370 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
RBM39-205ENST00000397370 DALRD3Q5D0E6 543 aaKnown RBP20.43■□□□□ 0.86
RBM39-205ENST00000397370 CNKSR1Q969H4 720 aa20.43■□□□□ 0.86
RBM39-205ENST00000397370 RCAN3Q9UKA8 241 aa20.43■□□□□ 0.86
RBM39-205ENST00000397370 SLX4Q8IY92 1834 aa20.43■□□□□ 0.86
RBM39-205ENST00000397370 HSP90B1P14625 803 aaKnown RBP20.42■□□□□ 0.86
RBM39-205ENST00000397370 CASP7P55210 303 aa20.42■□□□□ 0.86
RBM39-205ENST00000397370 UBE3BQ7Z3V4 1068 aa20.42■□□□□ 0.86
RBM39-205ENST00000397370 TTLL6Q8N841 843 aa20.42■□□□□ 0.86
RBM39-205ENST00000397370 RPGRQ92834 1020 aaKnown RBP20.42■□□□□ 0.86
RBM39-205ENST00000397370 PDE8AO60658 829 aa20.41■□□□□ 0.86
RBM39-205ENST00000397370 HOXA10P31260 410 aaPredicted RBP20.41■□□□□ 0.86
RBM39-205ENST00000397370 ZKSCAN2Q63HK3 967 aa20.41■□□□□ 0.86
RBM39-205ENST00000397370 ATF7IPQ6VMQ6 1270 aa20.41■□□□□ 0.86
RBM39-205ENST00000397370 GRM8O00222 908 aa20.4■□□□□ 0.86
RBM39-205ENST00000397370 ABCC4O15439 1325 aa20.4■□□□□ 0.86
RBM39-205ENST00000397370 TRIM27P14373 513 aa20.4■□□□□ 0.86
RBM39-205ENST00000397370 SF3B3Q15393 1217 aaKnown RBP20.4■□□□□ 0.86
RBM39-205ENST00000397370 TNNQ9UQP3 1299 aa20.4■□□□□ 0.86
RBM39-205ENST00000397370 TAF1P21675 1872 aa20.39■□□□□ 0.86
RBM39-205ENST00000397370 ALDH1B1P30837 517 aa20.39■□□□□ 0.85
RBM39-205ENST00000397370 CCT4P50991 539 aaKnown RBP20.39■□□□□ 0.85
RBM39-205ENST00000397370 RBM17Q96I25 401 aaKnown RBP20.39■□□□□ 0.85
RBM39-205ENST00000397370 C9orf78Q9NZ63 289 aaPredicted RBP20.39■□□□□ 0.85
RBM39-205ENST00000397370 GRIN3BO60391 1043 aa20.38■□□□□ 0.85
RBM39-205ENST00000397370 PRPF40BQ6NWY9 871 aaKnown RBP20.38■□□□□ 0.85
RBM39-205ENST00000397370 CRAMP1Q96RY5 1269 aa20.38■□□□□ 0.85
RBM39-205ENST00000397370 PLA2G12BQ9BX93 195 aa20.37■□□□□ 0.85
RBM39-205ENST00000397370 UTYO14607 1347 aa20.36■□□□□ 0.85
RBM39-205ENST00000397370 CTSWP56202 376 aa20.36■□□□□ 0.85
RBM39-205ENST00000397370 INTS3Q68E01 1043 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms