RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 AAMPQ13685 434 aa17.7■□□□□ 0.42
GAPDH-203ENST00000396858 UBE3BQ7Z3V4 1068 aa17.7■□□□□ 0.42
GAPDH-203ENST00000396858 NLRP10Q86W26 655 aa17.7■□□□□ 0.42
GAPDH-203ENST00000396858 CCDC191Q8NCU4 936 aa17.7■□□□□ 0.42
GAPDH-203ENST00000396858 NIP7Q9Y221 180 aaKnown RBP eCLIP17.7■□□□□ 0.421e-25■□□□□ 8.2
GAPDH-203ENST00000396858 LRRFIP2Q9Y608 721 aaKnown RBP17.7■□□□□ 0.42
GAPDH-203ENST00000396858 UTYO14607 1347 aa17.7■□□□□ 0.42
GAPDH-203ENST00000396858 GNAI2P04899 355 aa17.69■□□□□ 0.42
GAPDH-203ENST00000396858 SLC15A2Q16348 729 aa17.69■□□□□ 0.42
GAPDH-203ENST00000396858 TBC1D9BQ66K14 1250 aa17.69■□□□□ 0.42
GAPDH-203ENST00000396858 ZNF34Q8IZ26 560 aa17.69■□□□□ 0.42
GAPDH-203ENST00000396858 SUCLG2Q96I99 432 aa17.69■□□□□ 0.42
GAPDH-203ENST00000396858 CCDC136Q96JN2 1154 aa17.69■□□□□ 0.42
GAPDH-203ENST00000396858 LAMB2P55268 1798 aa17.68■□□□□ 0.42
GAPDH-203ENST00000396858 FAM177BA6PVY3 158 aa17.68■□□□□ 0.42
GAPDH-203ENST00000396858 RGL2O15211 777 aa17.68■□□□□ 0.42
GAPDH-203ENST00000396858 MSH5O43196 834 aa17.68■□□□□ 0.42
GAPDH-203ENST00000396858 TRIM28Q13263 835 aaKnown RBP17.68■□□□□ 0.42
GAPDH-203ENST00000396858 RTL5Q5HYW3 569 aaPredicted RBP17.68■□□□□ 0.42
GAPDH-203ENST00000396858 BICDL1Q6ZP65 573 aa17.68■□□□□ 0.42
GAPDH-203ENST00000396858 COL23A1Q86Y22 540 aaPredicted RBP17.68■□□□□ 0.42
GAPDH-203ENST00000396858 GYS1P13807 737 aa17.67■□□□□ 0.42
GAPDH-203ENST00000396858 CASP7P55210 303 aa17.67■□□□□ 0.42
GAPDH-203ENST00000396858 CEP85Q6P2H3 762 aa17.67■□□□□ 0.42
GAPDH-203ENST00000396858 CLEC4GQ6UXB4 293 aa17.67■□□□□ 0.42
GAPDH-203ENST00000396858 NTSR2O95665 410 aa17.66■□□□□ 0.42
GAPDH-203ENST00000396858 PARP10Q53GL7 1025 aa17.66■□□□□ 0.42
GAPDH-203ENST00000396858 SUSD4Q5VX71 490 aa17.66■□□□□ 0.42
GAPDH-203ENST00000396858 DDX60Q8IY21 1712 aaKnown RBP17.65■□□□□ 0.42
GAPDH-203ENST00000396858 H7C1W4 665 aa17.65■□□□□ 0.42
GAPDH-203ENST00000396858 PCCAP05165 728 aaPredicted RBP17.65■□□□□ 0.42
GAPDH-203ENST00000396858 FLAD1Q8NFF5 587 aa17.65■□□□□ 0.42
GAPDH-203ENST00000396858 CARMIL3Q8ND23 1372 aa17.65■□□□□ 0.42
GAPDH-203ENST00000396858 ABCC12Q96J65 1359 aa17.65■□□□□ 0.42
GAPDH-203ENST00000396858 EPHA10Q5JZY3 1008 aa17.64■□□□□ 0.41
GAPDH-203ENST00000396858 ZBTB38Q8NAP3 1195 aaPredicted RBP17.64■□□□□ 0.41
GAPDH-203ENST00000396858 FAM89AQ96GI7 184 aa17.64■□□□□ 0.41
GAPDH-203ENST00000396858 KAZALD1Q96I82 304 aa17.64■□□□□ 0.41
GAPDH-203ENST00000396858 BICC1Q9H694 974 aaKnown RBP17.64■□□□□ 0.41
GAPDH-203ENST00000396858 TRMT112Q9UI30 125 aaKnown RBP17.64■□□□□ 0.41
GAPDH-203ENST00000396858 NFIXQ14938 502 aa17.63■□□□□ 0.41
GAPDH-203ENST00000396858 MSL1Q68DK7 614 aa17.63■□□□□ 0.41
GAPDH-203ENST00000396858 SIRT2Q8IXJ6 389 aa17.63■□□□□ 0.41
GAPDH-203ENST00000396858 SYNE4Q8N205 404 aa17.63■□□□□ 0.41
GAPDH-203ENST00000396858 ANKRD44Q8N8A2 993 aa17.63■□□□□ 0.41
GAPDH-203ENST00000396858 UTP14AQ9BVJ6 771 aaKnown RBP17.63■□□□□ 0.41
GAPDH-203ENST00000396858 TNRC6CQ9HCJ0 1690 aaKnown RBP17.63■□□□□ 0.41
GAPDH-203ENST00000396858 CDHR2Q9BYE9 1310 aa17.63■□□□□ 0.41
GAPDH-203ENST00000396858 PPP1R42Q7Z4L9 355 aa17.62■□□□□ 0.41
GAPDH-203ENST00000396858 NUTM1Q86Y26 1132 aa17.62■□□□□ 0.41
GAPDH-203ENST00000396858 KDM2BQ8NHM5 1336 aa17.62■□□□□ 0.41
GAPDH-203ENST00000396858 SH3TC1Q8TE82 1336 aa17.62■□□□□ 0.41
GAPDH-203ENST00000396858 CASZ1Q86V15 1759 aa17.61■□□□□ 0.41
GAPDH-203ENST00000396858 PNMA6EA0A0J9YXQ4 647 aa17.61■□□□□ 0.41
GAPDH-203ENST00000396858 IGHDP01880 384 aa17.61■□□□□ 0.41
GAPDH-203ENST00000396858 DDR1Q08345 913 aa17.61■□□□□ 0.41
GAPDH-203ENST00000396858 PIAS4Q8N2W9 510 aaPredicted RBP17.61■□□□□ 0.41
GAPDH-203ENST00000396858 SETDB2Q96T68 719 aa17.61■□□□□ 0.41
GAPDH-203ENST00000396858 IRS4O14654 1257 aaPredicted RBP17.6■□□□□ 0.41
GAPDH-203ENST00000396858 HDAC1Q13547 482 aaPredicted RBP17.6■□□□□ 0.41
GAPDH-203ENST00000396858 NBPF5PQ86XG9 351 aaPredicted RBP17.6■□□□□ 0.41
GAPDH-203ENST00000396858 PDGFDQ9GZP0 370 aaPredicted RBP17.6■□□□□ 0.41
GAPDH-203ENST00000396858 HDAC5Q9UQL6 1122 aa17.6■□□□□ 0.41
GAPDH-203ENST00000396858 MTX1Q13505 466 aa17.59■□□□□ 0.41
GAPDH-203ENST00000396858 ERFEQ4G0M1 354 aa17.59■□□□□ 0.41
GAPDH-203ENST00000396858 RPAP2Q8IXW5 612 aaPredicted RBP17.59■□□□□ 0.41
GAPDH-203ENST00000396858 MYH3P11055 1940 aa17.59■□□□□ 0.41
GAPDH-203ENST00000396858 NRXN2Q9P2S2 1712 aa17.58■□□□□ 0.41
GAPDH-203ENST00000396858 LRP5O75197 1615 aa17.58■□□□□ 0.41
GAPDH-203ENST00000396858 SRGAP3O43295 1099 aa17.58■□□□□ 0.4
GAPDH-203ENST00000396858 HMMRO75330 724 aa17.58■□□□□ 0.4
GAPDH-203ENST00000396858 HCLS1P14317 486 aaPredicted RBP17.58■□□□□ 0.4
GAPDH-203ENST00000396858 CTSWP56202 376 aa17.58■□□□□ 0.4
GAPDH-203ENST00000396858 FOXO4P98177 505 aa17.58■□□□□ 0.4
GAPDH-203ENST00000396858 RABL6Q3YEC7 729 aaPredicted RBP17.58■□□□□ 0.4
GAPDH-203ENST00000396858 CENPQQ7L2Z9 268 aaPredicted RBP17.58■□□□□ 0.4
GAPDH-203ENST00000396858 CCDC24Q8N4L8 307 aa17.58■□□□□ 0.4
GAPDH-203ENST00000396858 PLA2G12BQ9BX93 195 aa17.58■□□□□ 0.4
GAPDH-203ENST00000396858 NYXQ9GZU5 481 aa17.58■□□□□ 0.4
GAPDH-203ENST00000396858 RWDD1Q9H446 243 aaPredicted RBP17.58■□□□□ 0.4
GAPDH-203ENST00000396858 CHMP3Q9Y3E7 222 aa17.58■□□□□ 0.4
GAPDH-203ENST00000396858 POLRMTO00411 1230 aaKnown RBP17.57■□□□□ 0.4
GAPDH-203ENST00000396858 NPHP1O15259 732 aa17.57■□□□□ 0.4
GAPDH-203ENST00000396858 ATP8B2P98198 1209 aa17.57■□□□□ 0.4
GAPDH-203ENST00000396858 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
GAPDH-203ENST00000396858 LMBR1LQ6UX01 489 aa17.57■□□□□ 0.4
GAPDH-203ENST00000396858 CNBD1Q8NA66 436 aa17.57■□□□□ 0.4
GAPDH-203ENST00000396858 CCDC85AQ96PX6 553 aaPredicted RBP17.57■□□□□ 0.4
GAPDH-203ENST00000396858 TM4SF1P30408 202 aa17.56■□□□□ 0.4
GAPDH-203ENST00000396858 POLA2Q14181 598 aa17.56■□□□□ 0.4
GAPDH-203ENST00000396858 PDE8AO60658 829 aa17.55■□□□□ 0.4
GAPDH-203ENST00000396858 SERPINB2P05120 415 aa17.55■□□□□ 0.4
GAPDH-203ENST00000396858 MMP10P09238 476 aa17.55■□□□□ 0.4
GAPDH-203ENST00000396858 GTF2E1P29083 439 aaPredicted RBP17.55■□□□□ 0.4
GAPDH-203ENST00000396858 R3HDM1Q15032 1099 aaKnown RBP17.55■□□□□ 0.4
GAPDH-203ENST00000396858 PRR5LQ6MZQ0 368 aa17.55■□□□□ 0.4
GAPDH-203ENST00000396858 C3orf67Q6ZVT6 689 aa17.55■□□□□ 0.4
GAPDH-203ENST00000396858 NLGN1Q8N2Q7 840 aa17.55■□□□□ 0.4
GAPDH-203ENST00000396858 SSH3Q8TE77 659 aa17.55■□□□□ 0.4
GAPDH-203ENST00000396858 RIC1Q4ADV7 1423 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms